RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP5	YER144C	TY1A-BL	Q12266	440 aa		4.14	□□□□□ -1.75
UBP5	YER144C	YJR142W	P47173	342 aa		4.14	□□□□□ -1.75
UBP5	YER144C	LSC2	P53312	427 aa		4.14	□□□□□ -1.75
UBP5	YER144C	RCM1	P53972	490 aa		4.14	□□□□□ -1.75
UBP5	YER144C	HPF1	Q05164	967 aa		4.14	□□□□□ -1.75
UBP5	YER144C	HDA3	Q06623	655 aa		4.14	□□□□□ -1.75
UBP5	YER144C	YKL091C	P33324	310 aa	Known RBP	4.13	□□□□□ -1.75
UBP5	YER144C	FAA3	P39002	694 aa		4.13	□□□□□ -1.75
UBP5	YER144C	CHZ1	P40019	153 aa	Predicted RBP	4.13	□□□□□ -1.75
UBP5	YER144C	ADE6	P38972	1358 aa	Known RBP	4.13	□□□□□ -1.75
UBP5	YER144C	TSR4	P25040	408 aa		4.13	□□□□□ -1.75
UBP5	YER144C	PPH3	P32345	308 aa		4.13	□□□□□ -1.75
UBP5	YER144C	SRP40	P32583	406 aa	Predicted RBP	4.13	□□□□□ -1.75
UBP5	YER144C	HXT5	P38695	592 aa		4.13	□□□□□ -1.75
UBP5	YER144C	FPR3	P38911	411 aa	Known RBP	4.13	□□□□□ -1.75
UBP5	YER144C	YGR122W	P53272	402 aa		4.13	□□□□□ -1.75
UBP5	YER144C	RMD1	Q03441	430 aa		4.13	□□□□□ -1.75
UBP5	YER144C	ESF1	Q06344	628 aa	Known RBP	4.13	□□□□□ -1.75
UBP5	YER144C	AAD14	P42884	376 aa		4.12	□□□□□ -1.75
UBP5	YER144C	YJL049W	P47048	450 aa		4.12	□□□□□ -1.75
UBP5	YER144C	PRP43	P53131	767 aa	Known RBP	4.12	□□□□□ -1.75
UBP5	YER144C	UBP2	Q01476	1272 aa		4.12	□□□□□ -1.75
UBP5	YER144C	YML133C	Q03099	1374 aa		4.12	□□□□□ -1.75
UBP5	YER144C	YLL067C	Q07888	1374 aa		4.12	□□□□□ -1.75
UBP5	YER144C	YLL066C	Q99208	1374 aa		4.12	□□□□□ -1.75
UBP5	YER144C	VAN1	P23642	535 aa		4.12	□□□□□ -1.75
UBP5	YER144C	PPG1	P32838	368 aa		4.12	□□□□□ -1.75
UBP5	YER144C	YKL069W	P36088	180 aa		4.12	□□□□□ -1.75
UBP5	YER144C	PMC1	P38929	1173 aa	Predicted RBP	4.12	□□□□□ -1.75
UBP5	YER144C	UBP12	P39538	1254 aa		4.12	□□□□□ -1.75
UBP5	YER144C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
UBP5	YER144C	PDS5	Q04264	1277 aa		4.12	□□□□□ -1.75
UBP5	YER144C	ISR1	Q06098	443 aa	Known RBP	4.12	□□□□□ -1.75
UBP5	YER144C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
UBP5	YER144C	MTR4	P47047	1073 aa	Known RBP	4.11	□□□□□ -1.75
UBP5	YER144C	LEU2	P04173	364 aa	Predicted RBP	4.11	□□□□□ -1.75
UBP5	YER144C	GRX1	P25373	110 aa	Known RBP	4.11	□□□□□ -1.75
UBP5	YER144C	ISC10	P32645	267 aa		4.11	□□□□□ -1.75
UBP5	YER144C	NTH2	P35172	780 aa		4.11	□□□□□ -1.75
UBP5	YER144C	HUL5	P53119	910 aa		4.11	□□□□□ -1.75
UBP5	YER144C	YGR053C	P53234	283 aa		4.11	□□□□□ -1.75
UBP5	YER144C	TRS33	Q99394	268 aa		4.11	□□□□□ -1.75
UBP5	YER144C	SWI5	P08153	709 aa		4.1	□□□□□ -1.75
UBP5	YER144C	SSB1	P11484	613 aa	Known RBP	4.1	□□□□□ -1.75
UBP5	YER144C	DLD1	P32891	587 aa		4.1	□□□□□ -1.75
UBP5	YER144C	YBL086C	P38177	466 aa		4.1	□□□□□ -1.75
UBP5	YER144C	SSB2	P40150	613 aa	Known RBP	4.1	□□□□□ -1.75
UBP5	YER144C	SPR3	P41901	512 aa		4.1	□□□□□ -1.75
UBP5	YER144C	FAA4	P47912	694 aa	Known RBP	4.1	□□□□□ -1.75
UBP5	YER144C	APP1	P53933	587 aa		4.1	□□□□□ -1.75
UBP5	YER144C	CDC55	Q00362	526 aa		4.1	□□□□□ -1.75
UBP5	YER144C	YPQ2	Q06328	317 aa		4.1	□□□□□ -1.75
UBP5	YER144C	RAD2	P07276	1031 aa		4.1	□□□□□ -1.75
UBP5	YER144C	TIM23	P32897	222 aa		4.1	□□□□□ -1.75
UBP5	YER144C	ATG3	P40344	310 aa		4.1	□□□□□ -1.75
UBP5	YER144C	OSW7	P43611	510 aa		4.1	□□□□□ -1.75
UBP5	YER144C	RSC4	Q02206	625 aa		4.1	□□□□□ -1.75
UBP5	YER144C	MLP1	Q02455	1875 aa	Known RBP	4.09	□□□□□ -1.75
UBP5	YER144C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
UBP5	YER144C	RPS6A	P0CX37	236 aa	Known RBP	4.09	□□□□□ -1.76
UBP5	YER144C	RPS6B	P0CX38	236 aa	Predicted RBP	4.09	□□□□□ -1.76
UBP5	YER144C	STE5	P32917	917 aa		4.09	□□□□□ -1.76
UBP5	YER144C	MNR2	P35724	969 aa		4.09	□□□□□ -1.76
UBP5	YER144C	MNN1	P39106	762 aa		4.09	□□□□□ -1.76
UBP5	YER144C	YJR098C	P47139	656 aa		4.09	□□□□□ -1.76
UBP5	YER144C	YOL057W	Q08225	711 aa		4.09	□□□□□ -1.76
UBP5	YER144C	TCB1	Q12466	1186 aa		4.09	□□□□□ -1.76
UBP5	YER144C	RRP5	Q05022	1729 aa	Known RBP	4.08	□□□□□ -1.76
UBP5	YER144C	CYT1	P07143	309 aa		4.08	□□□□□ -1.76
UBP5	YER144C	UGA4	P32837	571 aa		4.08	□□□□□ -1.76
UBP5	YER144C	VPS35	P34110	944 aa		4.08	□□□□□ -1.76
UBP5	YER144C	UFD2	P54860	961 aa		4.08	□□□□□ -1.76
UBP5	YER144C	SVL3	Q03088	825 aa	Known RBP	4.08	□□□□□ -1.76
UBP5	YER144C	TAP42	Q04372	366 aa		4.08	□□□□□ -1.76
UBP5	YER144C	CDC53	Q12018	815 aa	Known RBP	4.08	□□□□□ -1.76
UBP5	YER144C	COB	P00163	385 aa		4.07	□□□□□ -1.76
UBP5	YER144C	NUP82	P40368	713 aa		4.07	□□□□□ -1.76
UBP5	YER144C	GNP1	P48813	663 aa		4.07	□□□□□ -1.76
UBP5	YER144C	YNL011C	P53980	444 aa		4.07	□□□□□ -1.76
UBP5	YER144C	TY4B-H	P0C2J7	1802 aa		4.07	□□□□□ -1.76
UBP5	YER144C	TY4B-J	P47024	1803 aa		4.07	□□□□□ -1.76
UBP5	YER144C	CDC34	P14682	295 aa		4.07	□□□□□ -1.76
UBP5	YER144C	SPF1	P39986	1215 aa	Known RBP	4.07	□□□□□ -1.76
UBP5	YER144C	TPM2	P40414	161 aa		4.07	□□□□□ -1.76
UBP5	YER144C	ROG3	P43602	733 aa		4.07	□□□□□ -1.76
UBP5	YER144C	RPS0B	P46654	252 aa	Known RBP	4.07	□□□□□ -1.76
UBP5	YER144C	YRB30	P53107	440 aa	Predicted RBP	4.07	□□□□□ -1.76
UBP5	YER144C	CTR9	P89105	1077 aa		4.07	□□□□□ -1.76
UBP5	YER144C	SPT2	P06843	333 aa	Predicted RBP	4.06	□□□□□ -1.76
UBP5	YER144C	PIC2	P40035	300 aa		4.06	□□□□□ -1.76
UBP5	YER144C	MAD1	P40957	749 aa		4.06	□□□□□ -1.76
UBP5	YER144C	MRPL33	P20084	86 aa		4.06	□□□□□ -1.76
UBP5	YER144C	DUR3	P33413	735 aa		4.06	□□□□□ -1.76
UBP5	YER144C	PET112	P33893	541 aa		4.06	□□□□□ -1.76
UBP5	YER144C	EMW1	P42842	904 aa	Known RBP	4.06	□□□□□ -1.76
UBP5	YER144C	KRI1	P42846	591 aa	Known RBP	4.06	□□□□□ -1.76
UBP5	YER144C	RGD2	P43556	714 aa		4.06	□□□□□ -1.76
UBP5	YER144C	EEB1	Q02891	456 aa		4.06	□□□□□ -1.76
UBP5	YER144C	BDS1	Q08347	646 aa		4.06	□□□□□ -1.76
UBP5	YER144C	YRF1-2	P40105	1681 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms