RNA–Protein interactions for RNA: YDL195W

SEC31, Transcript of Component of the Sec13p-Sec31p complex of the COPII vesicle coat, yeastyeast

Gene SEC31, Length 3,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC31YDL195W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SEC31YDL195W NYV1Q12255 253 aa2.38□□□□□ -2.03
SEC31YDL195W GIN4Q12263 1142 aa2.38□□□□□ -2.03
SEC31YDL195W MSM1P22438 575 aa2.38□□□□□ -2.03
SEC31YDL195W MAC1P35192 417 aa2.38□□□□□ -2.03
SEC31YDL195W TPS3P38426 1054 aaKnown RBP2.38□□□□□ -2.03
SEC31YDL195W TFG1P41895 735 aaPredicted RBP2.38□□□□□ -2.03
SEC31YDL195W DAK2P43550 591 aa2.38□□□□□ -2.03
SEC31YDL195W YGL082WP53155 381 aa2.38□□□□□ -2.03
SEC31YDL195W YBP2P53169 641 aa2.38□□□□□ -2.03
SEC31YDL195W MAL13P53338 473 aa2.38□□□□□ -2.03
SEC31YDL195W FPK1P53739 893 aa2.38□□□□□ -2.03
SEC31YDL195W YAF9P53930 226 aa2.38□□□□□ -2.03
SEC31YDL195W VTC3Q02725 835 aa2.38□□□□□ -2.03
SEC31YDL195W RAD59Q12223 238 aa2.38□□□□□ -2.03
SEC31YDL195W YOL098CQ12496 1037 aa2.38□□□□□ -2.03
SEC31YDL195W TIF6Q12522 245 aaKnown RBP2.38□□□□□ -2.03
SEC31YDL195W KAR1P11927 433 aa2.37□□□□□ -2.03
SEC31YDL195W SPO11P23179 398 aa2.37□□□□□ -2.03
SEC31YDL195W DBP1P24784 617 aaKnown RBP2.37□□□□□ -2.03
SEC31YDL195W ABZ1P37254 787 aaPredicted RBP2.37□□□□□ -2.03
SEC31YDL195W MMS21P38632 267 aa2.37□□□□□ -2.03
SEC31YDL195W OSH3P38713 996 aaKnown RBP2.37□□□□□ -2.03
SEC31YDL195W YAP1801P38856 637 aa2.37□□□□□ -2.03
SEC31YDL195W DAS1P47005 663 aa2.37□□□□□ -2.03
SEC31YDL195W RSC1P53236 928 aa2.37□□□□□ -2.03
SEC31YDL195W UTP22P53254 1237 aaPredicted RBP2.37□□□□□ -2.03
SEC31YDL195W ALF1P53904 254 aa2.37□□□□□ -2.03
SEC31YDL195W BRE1Q07457 700 aaKnown RBP2.37□□□□□ -2.03
SEC31YDL195W CTI6Q08923 506 aa2.37□□□□□ -2.03
SEC31YDL195W SIT4P20604 311 aa2.37□□□□□ -2.03
SEC31YDL195W GRX1P25373 110 aaKnown RBP2.37□□□□□ -2.03
SEC31YDL195W RDS1P25611 832 aa2.37□□□□□ -2.03
SEC31YDL195W EAF6P47128 113 aa2.37□□□□□ -2.03
SEC31YDL195W ELG1Q12050 791 aa2.37□□□□□ -2.03
SEC31YDL195W DCS2Q12123 353 aa2.37□□□□□ -2.03
SEC31YDL195W NOP14Q99207 810 aaKnown RBP2.37□□□□□ -2.03
SEC31YDL195W MET6P05694 767 aaKnown RBP2.37□□□□□ -2.03
SEC31YDL195W CIT2P08679 460 aa2.37□□□□□ -2.03
SEC31YDL195W GSY2P27472 705 aa2.37□□□□□ -2.03
SEC31YDL195W BSD2P38356 321 aa2.37□□□□□ -2.03
SEC31YDL195W COG4Q06096 861 aa2.37□□□□□ -2.03
SEC31YDL195W SNF3P10870 884 aa2.36□□□□□ -2.03
SEC31YDL195W GCG1P32656 232 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W SHM1P37292 490 aaPredicted RBP2.36□□□□□ -2.03
SEC31YDL195W AIP1P46680 615 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W NSE3Q05541 303 aa2.36□□□□□ -2.03
SEC31YDL195W TFC8Q12308 588 aa2.36□□□□□ -2.03
SEC31YDL195W PGI1P12709 554 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W SEC18P18759 758 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W SRP54P20424 541 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W URA1P28272 314 aaPredicted RBP2.36□□□□□ -2.03
SEC31YDL195W HSP104P31539 908 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W MUD2P36084 527 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W BCD1P38772 366 aa2.36□□□□□ -2.03
SEC31YDL195W HFM1P51979 1187 aa2.36□□□□□ -2.03
SEC31YDL195W AAD16Q02895 342 aa2.36□□□□□ -2.03
SEC31YDL195W PIF1P07271 859 aa2.36□□□□□ -2.03
SEC31YDL195W EST1P17214 699 aaPredicted RBP2.36□□□□□ -2.03
SEC31YDL195W TRX2P22803 104 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W PRX1P34227 261 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SEC31YDL195W CDC27P38042 758 aa2.36□□□□□ -2.03
SEC31YDL195W CCT5P40413 562 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W PUS2P53167 370 aa2.36□□□□□ -2.03
SEC31YDL195W ALG12P53730 551 aa2.36□□□□□ -2.03
SEC31YDL195W MYO5Q04439 1219 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W PUN1Q06991 263 aa2.36□□□□□ -2.03
SEC31YDL195W PSK2Q08217 1101 aa2.36□□□□□ -2.03
SEC31YDL195W NEW1Q08972 1196 aaKnown RBP2.36□□□□□ -2.03
SEC31YDL195W GRX6Q12438 231 aa2.36□□□□□ -2.03
SEC31YDL195W MPH3P0CE00 602 aa2.35□□□□□ -2.03
SEC31YDL195W PYC1P11154 1178 aaKnown RBP2.35□□□□□ -2.03
SEC31YDL195W SRM1P21827 482 aa2.35□□□□□ -2.03
SEC31YDL195W NPR2P39923 615 aa2.35□□□□□ -2.03
SEC31YDL195W BUD16P39988 312 aa2.35□□□□□ -2.03
SEC31YDL195W YJL171CP46992 396 aa2.35□□□□□ -2.03
SEC31YDL195W MLC1P53141 149 aa2.35□□□□□ -2.03
SEC31YDL195W GPA1P08539 472 aa2.35□□□□□ -2.03
SEC31YDL195W MRPL32P25348 183 aa2.35□□□□□ -2.03
SEC31YDL195W BMH1P29311 267 aaKnown RBP2.35□□□□□ -2.03
SEC31YDL195W SWC3P31376 625 aa2.35□□□□□ -2.03
SEC31YDL195W ASF1P32447 279 aa2.35□□□□□ -2.03
SEC31YDL195W YKU70P32807 602 aa2.35□□□□□ -2.03
SEC31YDL195W MGE1P38523 228 aa2.35□□□□□ -2.03
SEC31YDL195W TDA3P38758 523 aa2.35□□□□□ -2.03
SEC31YDL195W FPR3P38911 411 aaKnown RBP2.35□□□□□ -2.03
SEC31YDL195W STM1P39015 273 aaKnown RBP2.35□□□□□ -2.03
SEC31YDL195W UBP5P39944 805 aa2.35□□□□□ -2.03
SEC31YDL195W EFM4P40516 257 aa2.35□□□□□ -2.03
SEC31YDL195W LYS14P40971 790 aa2.35□□□□□ -2.03
SEC31YDL195W TIM54P47045 478 aa2.35□□□□□ -2.03
SEC31YDL195W FOL1P53848 824 aa2.35□□□□□ -2.03
SEC31YDL195W FRK1Q03002 865 aaPredicted RBP2.35□□□□□ -2.03
SEC31YDL195W CWC15Q03772 175 aaKnown RBP2.35□□□□□ -2.03
SEC31YDL195W PUS5Q06244 254 aa2.35□□□□□ -2.03
SEC31YDL195W RGA2Q06407 1009 aa2.35□□□□□ -2.03
SEC31YDL195W DIB1Q06819 143 aaPredicted RBP2.35□□□□□ -2.03
SEC31YDL195W MMP1Q12372 583 aa2.35□□□□□ -2.03
SEC31YDL195W SEC23P15303 768 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 99.7 ms