RNA–Protein interactions for RNA: YDL166C

FAP7, Transcript of Essential NTPase required for small ribosome subunit synthesis, yeast

Gene FAP7, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAP7	YDL166C	PKH1	Q03407	766 aa		3.78	□□□□□ -1.8
FAP7	YDL166C	RRB1	Q04225	511 aa	Known RBP	3.78	□□□□□ -1.8
FAP7	YDL166C	GFD1	Q04839	188 aa	Known RBP	3.78	□□□□□ -1.8
FAP7	YDL166C	DPL1	Q05567	589 aa		3.78	□□□□□ -1.8
FAP7	YDL166C	VPS38	Q05919	439 aa		3.78	□□□□□ -1.8
FAP7	YDL166C	SNU66	Q12420	587 aa	Predicted RBP	3.78	□□□□□ -1.8
FAP7	YDL166C	TY4B-H	P0C2J7	1802 aa		3.78	□□□□□ -1.8
FAP7	YDL166C	TY4B-J	P47024	1803 aa		3.78	□□□□□ -1.8
FAP7	YDL166C	PDC1	P06169	563 aa	Known RBP	3.77	□□□□□ -1.81
FAP7	YDL166C	SSA2	P10592	639 aa	Known RBP	3.77	□□□□□ -1.81
FAP7	YDL166C	KIN1	P13185	1064 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	PRP5	P21372	849 aa	Predicted RBP	3.77	□□□□□ -1.81
FAP7	YDL166C	IMP2'	P32351	346 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	SRB4	P32569	687 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	SWI3	P32591	825 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	CNS1	P33313	385 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	SWH1	P35845	1188 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	EFM2	P38347	419 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	FYV10	P40492	516 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	ZDS2	P54786	942 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	YMR196W	Q04336	1088 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	ALE1	Q08548	619 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	SLM3	Q12093	417 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	SSF2	Q12153	453 aa	Predicted RBP	3.77	□□□□□ -1.81
FAP7	YDL166C	TCB1	Q12466	1186 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	YOL098C	Q12496	1037 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	NBL1	Q3E7Y6	73 aa		3.77	□□□□□ -1.81
FAP7	YDL166C	JIP3	O13555	125 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	TOP1	P04786	769 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
FAP7	YDL166C	RRP43	P25359	394 aa	Predicted RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	SRP40	P32583	406 aa	Predicted RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	SWE1	P32944	819 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	STO1	P34160	861 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	SQT1	P35184	431 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	DEF1	P35732	738 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	MUD2	P36084	527 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	PCH2	P38126	564 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	YGL082W	P53155	381 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	CAF130	P53280	1122 aa	Predicted RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	CWC22	P53333	577 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	NMA111	P53920	997 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	RMT2	Q03305	412 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	UTP5	Q04177	643 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	EIS1	Q05050	843 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	YPR109W	Q06104	294 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	ATG23	Q06671	453 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	SSP2	Q08646	371 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	ATG9	Q12142	997 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	PUS1	Q12211	544 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	MCM16	Q12262	181 aa		3.76	□□□□□ -1.81
FAP7	YDL166C	PGA3	Q12746	312 aa	Known RBP	3.76	□□□□□ -1.81
FAP7	YDL166C	CDC8	P00572	216 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	CDC37	P06101	506 aa	Known RBP	3.75	□□□□□ -1.81
FAP7	YDL166C	PDR1	P12383	1068 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	PHO13	P19881	312 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	SRP54	P20424	541 aa	Known RBP	3.75	□□□□□ -1.81
FAP7	YDL166C	CBP3	P21560	335 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	PRP45	P28004	379 aa	Predicted RBP	3.75	□□□□□ -1.81
FAP7	YDL166C	ZUO1	P32527	433 aa	Known RBP	3.75	□□□□□ -1.81
FAP7	YDL166C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
FAP7	YDL166C	OLA1	P38219	394 aa	Known RBP	3.75	□□□□□ -1.81
FAP7	YDL166C	RRP8	P38961	392 aa	Known RBP	3.75	□□□□□ -1.81
FAP7	YDL166C	PXA1	P41909	870 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	XKS1	P42826	600 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	YBP2	P53169	641 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	MTC5	Q03897	1148 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	GYL1	Q04322	720 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	YLR407W	Q06070	228 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	SPN1	Q06505	410 aa	Predicted RBP	3.75	□□□□□ -1.81
FAP7	YDL166C	ATG13	Q06628	738 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	VAC14	Q06708	880 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	OPY2	Q06810	360 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	APL4	Q12028	832 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	RRI2	Q12348	645 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	SMC6	Q12749	1114 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	TY4A-H	Q6Q5P6	413 aa		3.75	□□□□□ -1.81
FAP7	YDL166C	SEC23	P15303	768 aa	Known RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	HCA4	P20448	770 aa	Known RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	RAM1	P22007	431 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	ASF1	P32447	279 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	CDC11	P32458	415 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	MET1	P36150	593 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	MCX1	P38323	520 aa	Predicted RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	RGD1	P38339	666 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	CTM1	P38818	585 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	YMR124W	P39523	943 aa	Known RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	VPS8	P39702	1274 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	BUD16	P39988	312 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	TFG1	P41895	735 aa	Predicted RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	CTK3	P46963	296 aa	Predicted RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	ARH1	P48360	493 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	ENV11	P53246	860 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	YLR287C	Q05881	355 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	EST2	Q06163	884 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	CSC1	Q06538	782 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	INP54	Q08227	384 aa	Known RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	CTI6	Q08923	506 aa		3.74	□□□□□ -1.81
FAP7	YDL166C	YPL225W	Q08971	146 aa	Known RBP	3.74	□□□□□ -1.81
FAP7	YDL166C	ISU2	Q12056	156 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 87.5 ms