RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C CIC1P38779 376 aaKnown RBP2.4□□□□□ -2.03
BRE1YDL074C TCB2P48231 1178 aa2.4□□□□□ -2.03
BRE1YDL074C YGL081WP53156 320 aa2.4□□□□□ -2.03
BRE1YDL074C RTC4P53850 401 aa2.4□□□□□ -2.03
BRE1YDL074C YNL193WP53870 558 aa2.4□□□□□ -2.03
BRE1YDL074C FCP1Q03254 732 aa2.4□□□□□ -2.03
BRE1YDL074C RPN7Q06103 429 aaKnown RBP2.4□□□□□ -2.03
BRE1YDL074C BUD20Q08004 166 aaPredicted RBP2.4□□□□□ -2.03
BRE1YDL074C CEX1Q12453 761 aa2.4□□□□□ -2.03
BRE1YDL074C NBL1Q3E7Y6 73 aa2.4□□□□□ -2.03
BRE1YDL074C PRT1P06103 763 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C SIT4P20604 311 aa2.39□□□□□ -2.03
BRE1YDL074C DIT2P21595 489 aa2.39□□□□□ -2.03
BRE1YDL074C MPE1P35728 441 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C BOI1P38041 980 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C UGA2P38067 497 aa2.39□□□□□ -2.03
BRE1YDL074C MAL31P38156 614 aa2.39□□□□□ -2.03
BRE1YDL074C RFC5P38251 354 aa2.39□□□□□ -2.03
BRE1YDL074C JJJ2P46997 583 aa2.39□□□□□ -2.03
BRE1YDL074C PIP2P52960 996 aa2.39□□□□□ -2.03
BRE1YDL074C CWH41P53008 833 aa2.39□□□□□ -2.03
BRE1YDL074C GDE1Q02979 1223 aa2.39□□□□□ -2.03
BRE1YDL074C MRD1Q06106 887 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C THI3Q07471 609 aa2.39□□□□□ -2.03
BRE1YDL074C APC11Q12157 165 aa2.39□□□□□ -2.03
BRE1YDL074C NOP58Q12499 511 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C QCR6P00127 147 aa2.39□□□□□ -2.03
BRE1YDL074C CPA2P03965 1118 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C HXK1P04806 485 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C MGM1P32266 881 aa2.39□□□□□ -2.03
BRE1YDL074C KNS1P32350 737 aaPredicted RBP2.39□□□□□ -2.03
BRE1YDL074C KTR3P38130 404 aaPredicted RBP2.39□□□□□ -2.03
BRE1YDL074C MAL33P38157 468 aa2.39□□□□□ -2.03
BRE1YDL074C PFF1P38244 976 aa2.39□□□□□ -2.03
BRE1YDL074C NPR3P38742 1146 aa2.39□□□□□ -2.03
BRE1YDL074C RPN1P38764 993 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C RTS1P38903 757 aa2.39□□□□□ -2.03
BRE1YDL074C ICP55P40051 511 aa2.39□□□□□ -2.03
BRE1YDL074C STU2P46675 888 aa2.39□□□□□ -2.03
BRE1YDL074C KRE33P53914 1056 aaKnown RBP2.39□□□□□ -2.03
BRE1YDL074C UBP16Q02863 499 aa2.39□□□□□ -2.03
BRE1YDL074C SGD1Q06132 899 aa2.39□□□□□ -2.03
BRE1YDL074C GRX6Q12438 231 aa2.39□□□□□ -2.03
BRE1YDL074C CYC8P14922 966 aa2.38□□□□□ -2.03
BRE1YDL074C RDS1P25611 832 aa2.38□□□□□ -2.03
BRE1YDL074C RER2P35196 286 aa2.38□□□□□ -2.03
BRE1YDL074C DID4P36108 232 aa2.38□□□□□ -2.03
BRE1YDL074C TCD1P38756 429 aa2.38□□□□□ -2.03
BRE1YDL074C NPR2P39923 615 aa2.38□□□□□ -2.03
BRE1YDL074C YMR147WP40218 223 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C TPM2P40414 161 aa2.38□□□□□ -2.03
BRE1YDL074C VID28P40547 921 aa2.38□□□□□ -2.03
BRE1YDL074C YPT11P48559 417 aa2.38□□□□□ -2.03
BRE1YDL074C NAF1P53919 492 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C UFD2P54860 961 aa2.38□□□□□ -2.03
BRE1YDL074C RPS15Q01855 142 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C PKH3Q03306 898 aaPredicted RBP2.38□□□□□ -2.03
BRE1YDL074C KAR5Q04746 504 aa2.38□□□□□ -2.03
BRE1YDL074C INM2Q05533 292 aa2.38□□□□□ -2.03
BRE1YDL074C YLR407WQ06070 228 aa2.38□□□□□ -2.03
BRE1YDL074C TIP41Q12199 356 aa2.38□□□□□ -2.03
BRE1YDL074C PUS1Q12211 544 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C HKR1P41809 1802 aa2.38□□□□□ -2.03
BRE1YDL074C HSP82P02829 709 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C BMH1P29311 267 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C RAM2P29703 316 aa2.38□□□□□ -2.03
BRE1YDL074C SLA1P32790 1244 aa2.38□□□□□ -2.03
BRE1YDL074C GLO3P38682 493 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C TOM71P38825 639 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C HAL5P38970 855 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C HXT10P43581 546 aa2.38□□□□□ -2.03
BRE1YDL074C YFH7P43591 353 aa2.38□□□□□ -2.03
BRE1YDL074C PIB2P53191 635 aa2.38□□□□□ -2.03
BRE1YDL074C ERO1Q03103 563 aa2.38□□□□□ -2.03
BRE1YDL074C HCR1Q05775 265 aaKnown RBP2.38□□□□□ -2.03
BRE1YDL074C ACK1Q07622 623 aaPredicted RBP2.38□□□□□ -2.03
BRE1YDL074C CTI6Q08923 506 aa2.38□□□□□ -2.03
BRE1YDL074C LAM4P38800 1345 aa2.37□□□□□ -2.03
BRE1YDL074C FIG2P25653 1609 aa2.37□□□□□ -2.03
BRE1YDL074C RGP1P16664 663 aa2.37□□□□□ -2.03
BRE1YDL074C MCM3P24279 971 aaKnown RBP2.37□□□□□ -2.03
BRE1YDL074C KRE2P27809 442 aa2.37□□□□□ -2.03
BRE1YDL074C FRD1P32614 470 aaKnown RBP2.37□□□□□ -2.03
BRE1YDL074C MDL2P33311 773 aa2.37□□□□□ -2.03
BRE1YDL074C SAS3P34218 831 aa2.37□□□□□ -2.03
BRE1YDL074C YKL222CP35995 705 aa2.37□□□□□ -2.03
BRE1YDL074C SAP190P36123 1033 aa2.37□□□□□ -2.03
BRE1YDL074C TOS1P38288 455 aa2.37□□□□□ -2.03
BRE1YDL074C LEO1P38439 464 aa2.37□□□□□ -2.03
BRE1YDL074C MSH4P40965 878 aaPredicted RBP2.37□□□□□ -2.03
BRE1YDL074C APL6P46682 809 aa2.37□□□□□ -2.03
BRE1YDL074C ECM23Q02710 187 aa2.37□□□□□ -2.03
BRE1YDL074C YCG1Q06680 1035 aa2.37□□□□□ -2.03
BRE1YDL074C YPL260WQ08977 551 aa2.37□□□□□ -2.03
BRE1YDL074C PGA3Q12746 312 aaKnown RBP2.37□□□□□ -2.03
BRE1YDL074C RAD61Q99359 647 aa2.37□□□□□ -2.03
BRE1YDL074C SES1P07284 462 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C GPA1P08539 472 aa2.36□□□□□ -2.03
BRE1YDL074C FRS2P15625 503 aaKnown RBP2.36□□□□□ -2.03
BRE1YDL074C ATE1P16639 503 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms