RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	GFD1	Q04839	188 aa	Known RBP	11.59	□□□□□ -0.55
YCL074W	YCL074W	VPS1	P21576	704 aa	Known RBP	11.58	□□□□□ -0.56
YCL074W	YCL074W	RNR3	P21672	869 aa	Known RBP	11.58	□□□□□ -0.56
YCL074W	YCL074W	ADE17	P38009	592 aa	Known RBP	11.58	□□□□□ -0.56
YCL074W	YCL074W	PSY4	P38193	441 aa		11.58	□□□□□ -0.56
YCL074W	YCL074W	JJJ2	P46997	583 aa		11.58	□□□□□ -0.56
YCL074W	YCL074W	NAF1	P53919	492 aa	Known RBP	11.58	□□□□□ -0.56
YCL074W	YCL074W	YCG1	Q06680	1035 aa		11.58	□□□□□ -0.56
YCL074W	YCL074W	PMD1	P32634	1753 aa		11.58	□□□□□ -0.56
YCL074W	YCL074W	SIT4	P20604	311 aa		11.57	□□□□□ -0.56
YCL074W	YCL074W	YHL050C	P38721	697 aa		11.57	□□□□□ -0.56
YCL074W	YCL074W	PCI8	P40512	444 aa		11.57	□□□□□ -0.56
YCL074W	YCL074W	ALD2	P47771	506 aa		11.57	□□□□□ -0.56
YCL074W	YCL074W	VPS60	Q03390	229 aa		11.57	□□□□□ -0.56
YCL074W	YCL074W	MMR1	Q06324	491 aa		11.57	□□□□□ -0.56
YCL074W	YCL074W	YOR111W	Q99210	232 aa		11.57	□□□□□ -0.56
YCL074W	YCL074W	RIT1	P23796	513 aa		11.56	□□□□□ -0.56
YCL074W	YCL074W	BUD31	P25337	157 aa	Predicted RBP	11.56	□□□□□ -0.56
YCL074W	YCL074W	RTC4	P53850	401 aa		11.56	□□□□□ -0.56
YCL074W	YCL074W	YPL260W	Q08977	551 aa		11.56	□□□□□ -0.56
YCL074W	YCL074W	RAD61	Q99359	647 aa		11.56	□□□□□ -0.56
YCL074W	YCL074W	CAF20	P12962	161 aa	Known RBP	11.55	□□□□□ -0.56
YCL074W	YCL074W	CDC15	P27636	974 aa		11.55	□□□□□ -0.56
YCL074W	YCL074W	SAP190	P36123	1033 aa		11.55	□□□□□ -0.56
YCL074W	YCL074W	CSM2	P40465	213 aa		11.55	□□□□□ -0.56
YCL074W	YCL074W	MGA2	P40578	1113 aa		11.55	□□□□□ -0.56
YCL074W	YCL074W	EIS1	Q05050	843 aa	Known RBP	11.55	□□□□□ -0.56
YCL074W	YCL074W	TMA16	Q08687	178 aa		11.55	□□□□□ -0.56
YCL074W	YCL074W	TIP41	Q12199	356 aa		11.55	□□□□□ -0.56
YCL074W	YCL074W	HKR1	P41809	1802 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	PET111	P08468	800 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	SNF3	P10870	884 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	LTV1	P34078	463 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	PFF1	P38244	976 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	OSW7	P43611	510 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	MYO5	Q04439	1219 aa	Known RBP	11.54	□□□□□ -0.56
YCL074W	YCL074W	YDR341C	Q05506	607 aa	Known RBP	11.54	□□□□□ -0.56
YCL074W	YCL074W	TOS4	Q06266	489 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	YOR296W	Q08748	1289 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	PTC5	Q12511	572 aa		11.54	□□□□□ -0.56
YCL074W	YCL074W	MET6	P05694	767 aa	Known RBP	11.53	□□□□□ -0.56
YCL074W	YCL074W	PHO13	P19881	312 aa		11.53	□□□□□ -0.56
YCL074W	YCL074W	VID27	P40157	782 aa		11.53	□□□□□ -0.56
YCL074W	YCL074W	COG4	Q06096	861 aa		11.53	□□□□□ -0.56
YCL074W	YCL074W	AFT2	Q08957	416 aa		11.53	□□□□□ -0.56
YCL074W	YCL074W	WRS1	Q12109	432 aa	Known RBP	11.53	□□□□□ -0.56
YCL074W	YCL074W	QCR6	P00127	147 aa		11.52	□□□□□ -0.57
YCL074W	YCL074W	HIS4	P00815	799 aa	Known RBP	11.52	□□□□□ -0.57
YCL074W	YCL074W	PDC1	P06169	563 aa	Known RBP	11.52	□□□□□ -0.57
YCL074W	YCL074W	ALG1	P16661	449 aa		11.52	□□□□□ -0.57
YCL074W	YCL074W	YGL138C	P53122	345 aa		11.52	□□□□□ -0.57
YCL074W	YCL074W	FAP1	P53971	965 aa		11.52	□□□□□ -0.57
YCL074W	YCL074W	RPT6	Q01939	405 aa	Known RBP	11.52	□□□□□ -0.57
YCL074W	YCL074W	APL4	Q12028	832 aa		11.52	□□□□□ -0.57
YCL074W	YCL074W	FLO1	P32768	1537 aa		11.51	□□□□□ -0.57
YCL074W	YCL074W	MSH3	P25336	1018 aa		11.51	□□□□□ -0.57
YCL074W	YCL074W	APL6	P46682	809 aa		11.51	□□□□□ -0.57
YCL074W	YCL074W	STR2	P47164	639 aa		11.51	□□□□□ -0.57
YCL074W	YCL074W	CIT1	P00890	479 aa		11.5	□□□□□ -0.57
YCL074W	YCL074W	PET123	P17558	318 aa		11.5	□□□□□ -0.57
YCL074W	YCL074W	VPS8	P39702	1274 aa		11.5	□□□□□ -0.57
YCL074W	YCL074W	ERO1	Q03103	563 aa		11.5	□□□□□ -0.57
YCL074W	YCL074W	CLF1	Q12309	687 aa	Predicted RBP	11.5	□□□□□ -0.57
YCL074W	YCL074W	CDC37	P06101	506 aa	Known RBP	11.49	□□□□□ -0.57
YCL074W	YCL074W	MRC1	P25588	1096 aa		11.49	□□□□□ -0.57
YCL074W	YCL074W	PRO3	P32263	286 aa	Known RBP	11.49	□□□□□ -0.57
YCL074W	YCL074W	HIR1	P32479	840 aa		11.49	□□□□□ -0.57
YCL074W	YCL074W	PCH2	P38126	564 aa		11.49	□□□□□ -0.57
YCL074W	YCL074W	TOM71	P38825	639 aa	Known RBP	11.49	□□□□□ -0.57
YCL074W	YCL074W	CAJ1	P39101	391 aa		11.49	□□□□□ -0.57
YCL074W	YCL074W	DAK2	P43550	591 aa		11.49	□□□□□ -0.57
YCL074W	YCL074W	FYV8	P46949	817 aa	Known RBP	11.49	□□□□□ -0.57
YCL074W	YCL074W	GIS4	Q04233	774 aa		11.49	□□□□□ -0.57
YCL074W	YCL074W	PSR2	Q07949	397 aa		11.49	□□□□□ -0.57
YCL074W	YCL074W	RPL8B	P29453	256 aa	Known RBP	11.48	□□□□□ -0.57
YCL074W	YCL074W	BCD1	P38772	366 aa		11.48	□□□□□ -0.57
YCL074W	YCL074W	APT1	P49435	187 aa	Known RBP	11.48	□□□□□ -0.57
YCL074W	YCL074W	ALF1	P53904	254 aa		11.48	□□□□□ -0.57
YCL074W	YCL074W	THR4	P16120	514 aa	Known RBP	11.47	□□□□□ -0.57
YCL074W	YCL074W	MAK11	P20484	414 aa	Known RBP	11.47	□□□□□ -0.57
YCL074W	YCL074W	GLN1	P32288	370 aa	Known RBP	11.47	□□□□□ -0.57
YCL074W	YCL074W	PXL1	P36166	706 aa		11.47	□□□□□ -0.57
YCL074W	YCL074W	SPT8	P38915	602 aa		11.47	□□□□□ -0.57
YCL074W	YCL074W	GTT3	P39996	337 aa		11.47	□□□□□ -0.57
YCL074W	YCL074W	LYS14	P40971	790 aa		11.47	□□□□□ -0.57
YCL074W	YCL074W	YGR237C	P50089	785 aa		11.47	□□□□□ -0.57
YCL074W	YCL074W	VPS38	Q05919	439 aa		11.47	□□□□□ -0.57
YCL074W	YCL074W	ARG82	P07250	355 aa		11.46	□□□□□ -0.57
YCL074W	YCL074W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.46	□□□□□ -0.57	not detected
YCL074W	YCL074W	SEC65	P29478	273 aa		11.46	□□□□□ -0.57
YCL074W	YCL074W	SMY1	P32364	656 aa	Known RBP	11.46	□□□□□ -0.57
YCL074W	YCL074W	YET1	P35723	206 aa		11.46	□□□□□ -0.57
YCL074W	YCL074W	CTM1	P38818	585 aa		11.46	□□□□□ -0.57
YCL074W	YCL074W	PUS6	P53294	404 aa		11.46	□□□□□ -0.57
YCL074W	YCL074W	PRP42	Q03776	544 aa	Known RBP	11.46	□□□□□ -0.57
YCL074W	YCL074W	KEL3	Q08979	651 aa	Predicted RBP	11.46	□□□□□ -0.57
YCL074W	YCL074W	RRP43	P25359	394 aa	Predicted RBP	11.45	□□□□□ -0.58
YCL074W	YCL074W	EFM2	P38347	419 aa		11.45	□□□□□ -0.58
YCL074W	YCL074W	RTT107	P38850	1070 aa		11.45	□□□□□ -0.58
YCL074W	YCL074W	TIF4632	P39936	914 aa	Known RBP	11.45	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms