RNA–Protein interactions for RNA: ENSMUST00000222544.1

Trim27-206, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim27, Length 4,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-206ENSMUST00000222544 Exoc6bA6H5Z3 810 aa16.48■□□□□ 0.23
Trim27-206ENSMUST00000222544 Tpm3-rs7D3Z2H9 248 aa16.48■□□□□ 0.23
Trim27-206ENSMUST00000222544 FanclQ9CR14 375 aa16.48■□□□□ 0.23
Trim27-206ENSMUST00000222544 Erich3F6QRE9 1637 aa16.48■□□□□ 0.23
Trim27-206ENSMUST00000222544 Nol8Q3UHX0 1147 aaKnown RBP16.47■□□□□ 0.23
Trim27-206ENSMUST00000222544 HnrnpmQ9D0E1 729 aaKnown RBP16.47■□□□□ 0.23
Trim27-206ENSMUST00000222544 Pla2r1Q62028 1487 aa16.47■□□□□ 0.23
Trim27-206ENSMUST00000222544 4931400O07RikQ9D4M5 137 aa16.46■□□□□ 0.23
Trim27-206ENSMUST00000222544 KdrP35918 1367 aa16.46■□□□□ 0.23
Trim27-206ENSMUST00000222544 Fchsd2Q3USJ8 740 aa16.46■□□□□ 0.22
Trim27-206ENSMUST00000222544 Cchcr1Q8K2I2 770 aa16.45■□□□□ 0.22
Trim27-206ENSMUST00000222544 Arhgef12Q8R4H2 1543 aaKnown RBP16.45■□□□□ 0.22
Trim27-206ENSMUST00000222544 Ankrd44B2RXR6 993 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Ddx54Q8K4L0 874 aaKnown RBP16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Tmc1Q8R4P5 757 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Ssh2Q5SW75 1423 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 TnikP83510 1323 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 EvcP57680 1005 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Ppp1r42Q8R1Z4 357 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Cplx1P63040 134 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Hmgn5Q9JL35 406 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Mctp1E9PV86 951 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Gm156Q58A37 223 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 Bloc1s4Q8VED2 215 aa16.44■□□□□ 0.22
Trim27-206ENSMUST00000222544 IbtkQ6ZPR6 1352 aaKnown RBP16.43■□□□□ 0.22
Trim27-206ENSMUST00000222544 Cbx1P83917 185 aaKnown RBP16.43■□□□□ 0.22
Trim27-206ENSMUST00000222544 WizO88286 1684 aaKnown RBP16.43■□□□□ 0.22
Trim27-206ENSMUST00000222544 Atf7ipQ7TT18 1306 aa16.43■□□□□ 0.22
Trim27-206ENSMUST00000222544 Gm10471E9Q1C7 252 aa16.43■□□□□ 0.22
Trim27-206ENSMUST00000222544 PdcQ9QW08 244 aa16.43■□□□□ 0.22
Trim27-206ENSMUST00000222544 DroshaQ5HZJ0 1373 aaKnown RBP16.43■□□□□ 0.22
Trim27-206ENSMUST00000222544 Caskin1Q6P9K8 1431 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 Hs1bp3Q3TC93 395 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 Gpatch3Q8BIY1 525 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 TnmdQ9EP64 317 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 Brd1E9PZ26 1189 aaKnown RBP16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 Rec8Q8C5S7 591 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 HypkQ9CR41 129 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 Serpina10Q8R121 448 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 Top1mtQ8R4U6 593 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 Lmtk2Q3TYD6 1471 aa16.42■□□□□ 0.22
Trim27-206ENSMUST00000222544 ImpactO55091 318 aa16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 BcanQ61361 883 aa16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 Slc52a2Q9D8F3 450 aa16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 Prex2Q3LAC4 1598 aa16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 Trim27Q62158 513 aa16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 NaspQ99MD9 773 aaKnown RBP16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 Zranb3Q6NZP1 1069 aa16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 Cpsf1Q9EPU4 1441 aaKnown RBP16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 Gadd45bP22339 160 aa16.41■□□□□ 0.22
Trim27-206ENSMUST00000222544 Gjb2Q00977 226 aa16.4■□□□□ 0.22
Trim27-206ENSMUST00000222544 Kdm3bQ6ZPY7 1562 aa16.4■□□□□ 0.22
Trim27-206ENSMUST00000222544 Gm10093D3YYI8 482 aa16.4■□□□□ 0.22
Trim27-206ENSMUST00000222544 Hdac1O09106 482 aaKnown RBP16.4■□□□□ 0.22
Trim27-206ENSMUST00000222544 Ppfia3P60469 1194 aa16.4■□□□□ 0.22
Trim27-206ENSMUST00000222544 Gabpb2P81069 414 aa16.4■□□□□ 0.22
Trim27-206ENSMUST00000222544 GphnQ8BUV3 769 aaKnown RBP16.39■□□□□ 0.21
Trim27-206ENSMUST00000222544 Gdpd2Q9ESM6 539 aa16.39■□□□□ 0.21
Trim27-206ENSMUST00000222544 Brf1Q8CFK2 676 aa16.39■□□□□ 0.21
Trim27-206ENSMUST00000222544 NcapgE9PWG6 1004 aa16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Chrna2Q91X60 512 aa16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Nsfl1cQ9CZ44 370 aaKnown RBP16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Mapkbp1Q6NS57 1503 aa16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Cavin1O54724 392 aa16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Cdkn1cP49919 348 aa16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Fam13aQ8BGI4 693 aa16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Arid4aF8VPQ2 1261 aaKnown RBP16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Nup88Q8CEC0 753 aaKnown RBP16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 Psma5Q9Z2U1 241 aaKnown RBP16.38■□□□□ 0.21
Trim27-206ENSMUST00000222544 EappQ5BU09 281 aa16.37■□□□□ 0.21
Trim27-206ENSMUST00000222544 Ubxn4Q8VCH8 506 aa16.37■□□□□ 0.21
Trim27-206ENSMUST00000222544 Lmo7E9PYF4 1699 aaKnown RBP16.37■□□□□ 0.21
Trim27-206ENSMUST00000222544 Sf3b2Q3UJB0 878 aaKnown RBP16.37■□□□□ 0.21
Trim27-206ENSMUST00000222544 Tpm3P21107 285 aaKnown RBP16.36■□□□□ 0.21
Trim27-206ENSMUST00000222544 Gsdma3Q5Y4Y6 464 aa16.36■□□□□ 0.21
Trim27-206ENSMUST00000222544 Chd1lQ9CXF7 900 aa16.36■□□□□ 0.21
Trim27-206ENSMUST00000222544 PhaxQ9JJT9 385 aaKnown RBP16.36■□□□□ 0.21
Trim27-206ENSMUST00000222544 AI481877A2ALV5 1481 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Rapgef6Q5NCJ1 1609 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Ppp1r15aP17564 657 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Tceanc2Q8R2M0 207 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Nop14Q8R3N1 860 aaKnown RBP16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Dmrtc1Q9D9R7 182 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Map7d2A2AG50 781 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 F2rP30558 430 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Cplx2P84086 134 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Adcy10Q8C0T9 1614 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 NinlQ6ZQ12 1394 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Dennd6aQ8BH65 605 aa16.35■□□□□ 0.21
Trim27-206ENSMUST00000222544 Adcy5P84309 1262 aa16.34■□□□□ 0.21
Trim27-206ENSMUST00000222544 Pdia3P27773 505 aaKnown RBP16.34■□□□□ 0.21
Trim27-206ENSMUST00000222544 Disp1Q3TDN0 1521 aa16.34■□□□□ 0.21
Trim27-206ENSMUST00000222544 Cfap99A0A140LIX9 648 aa16.34■□□□□ 0.21
Trim27-206ENSMUST00000222544 Pmfbp1Q9WVQ0 1022 aa16.34■□□□□ 0.21
Trim27-206ENSMUST00000222544 Atp10dQ8K2X1 1416 aa16.34■□□□□ 0.21
Trim27-206ENSMUST00000222544 Anapc15-psA0A140T8L6 141 aa16.33■□□□□ 0.21
Trim27-206ENSMUST00000222544 Zpr1Q62384 459 aa16.33■□□□□ 0.21
Trim27-206ENSMUST00000222544 Smc4Q8CG47 1286 aa16.33■□□□□ 0.21
Trim27-206ENSMUST00000222544 Krt85Q9Z2T6 507 aa16.33■□□□□ 0.21
Trim27-206ENSMUST00000222544 Cnnm1Q0GA42 951 aa16.33■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms