Protein–RNA interactions for Protein: Q8R1Z4

Ppp1r42, Protein phosphatase 1 regulatory subunit 42, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r42Q8R1Z4 Gm25239-201ENSMUST00000174915 86 ntBASIC46.37■■■■■ 5.01
Ppp1r42Q8R1Z4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.68■■■■■ 4.42
Ppp1r42Q8R1Z4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Ppp1r42Q8R1Z4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.1■■■■■ 4.33
Ppp1r42Q8R1Z4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.25■■■■■ 4.19
Ppp1r42Q8R1Z4 Gm15042-201ENSMUST00000120212 883 ntBASIC40.93■■■■■ 4.14
Ppp1r42Q8R1Z4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.87■■■■■ 4.13
Ppp1r42Q8R1Z4 Gm15045-201ENSMUST00000117359 883 ntBASIC40.16■■■■■ 4.02
Ppp1r42Q8R1Z4 Gm24109-201ENSMUST00000175489 103 ntBASIC40.02■■■■■ 4
Ppp1r42Q8R1Z4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Ppp1r42Q8R1Z4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Ppp1r42Q8R1Z4 Psd-208ENSMUST00000224556 2034 ntBASIC39.19■■■■□ 3.86
Ppp1r42Q8R1Z4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.1■■■■□ 3.85
Ppp1r42Q8R1Z4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.94■■■■□ 3.82
Ppp1r42Q8R1Z4 Gm23366-201ENSMUST00000175022 89 ntBASIC38.75■■■■□ 3.79
Ppp1r42Q8R1Z4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.72■■■■□ 3.79
Ppp1r42Q8R1Z4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
Ppp1r42Q8R1Z4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
Ppp1r42Q8R1Z4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
Ppp1r42Q8R1Z4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.4■■■■□ 3.74
Ppp1r42Q8R1Z4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Ppp1r42Q8R1Z4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.23■■■■□ 3.71
Ppp1r42Q8R1Z4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Ppp1r42Q8R1Z4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.11■■■■□ 3.69
Ppp1r42Q8R1Z4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38.06■■■■□ 3.68
Ppp1r42Q8R1Z4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.98■■■■□ 3.67
Ppp1r42Q8R1Z4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Ppp1r42Q8R1Z4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Ppp1r42Q8R1Z4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Ppp1r42Q8R1Z4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.7■■■■□ 3.63
Ppp1r42Q8R1Z4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Ppp1r42Q8R1Z4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.6■■■■□ 3.61
Ppp1r42Q8R1Z4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.45■■■■□ 3.59
Ppp1r42Q8R1Z4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.57
Ppp1r42Q8R1Z4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Ppp1r42Q8R1Z4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.01■■■■□ 3.52
Ppp1r42Q8R1Z4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Ppp1r42Q8R1Z4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
Ppp1r42Q8R1Z4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Ppp1r42Q8R1Z4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Ppp1r42Q8R1Z4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.74■■■■□ 3.47
Ppp1r42Q8R1Z4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Ppp1r42Q8R1Z4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Ppp1r42Q8R1Z4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Ppp1r42Q8R1Z4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.6■■■■□ 3.45
Ppp1r42Q8R1Z4 Gm25238-201ENSMUST00000174914 89 ntBASIC36.5■■■■□ 3.43
Ppp1r42Q8R1Z4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.49■■■■□ 3.43
Ppp1r42Q8R1Z4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Ppp1r42Q8R1Z4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.37■■■■□ 3.41
Ppp1r42Q8R1Z4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36.32■■■■□ 3.41
Ppp1r42Q8R1Z4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.32■■■■□ 3.4
Ppp1r42Q8R1Z4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Ppp1r42Q8R1Z4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Ppp1r42Q8R1Z4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Ppp1r42Q8R1Z4 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.18■■■■□ 3.38
Ppp1r42Q8R1Z4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Ppp1r42Q8R1Z4 Gm27325-201ENSMUST00000175467 74 ntBASIC35.98■■■■□ 3.35
Ppp1r42Q8R1Z4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Ppp1r42Q8R1Z4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Ppp1r42Q8R1Z4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.85■■■■□ 3.33
Ppp1r42Q8R1Z4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Ppp1r42Q8R1Z4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.77■■■■□ 3.32
Ppp1r42Q8R1Z4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.77■■■■□ 3.32
Ppp1r42Q8R1Z4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Ppp1r42Q8R1Z4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.76■■■■□ 3.31
Ppp1r42Q8R1Z4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.72■■■■□ 3.31
Ppp1r42Q8R1Z4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
Ppp1r42Q8R1Z4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Ppp1r42Q8R1Z4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.59■■■■□ 3.29
Ppp1r42Q8R1Z4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.58■■■■□ 3.29
Ppp1r42Q8R1Z4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC35.55■■■■□ 3.28
Ppp1r42Q8R1Z4 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.53■■■■□ 3.28
Ppp1r42Q8R1Z4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Ppp1r42Q8R1Z4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.45■■■■□ 3.27
Ppp1r42Q8R1Z4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Ppp1r42Q8R1Z4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
Ppp1r42Q8R1Z4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.37■■■■□ 3.25
Ppp1r42Q8R1Z4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.35■■■■□ 3.25
Ppp1r42Q8R1Z4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Ppp1r42Q8R1Z4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Ppp1r42Q8R1Z4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.14■■■■□ 3.22
Ppp1r42Q8R1Z4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.11■■■■□ 3.21
Ppp1r42Q8R1Z4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Ppp1r42Q8R1Z4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Ppp1r42Q8R1Z4 Rab21-202ENSMUST00000218831 843 ntBASIC35■■■■□ 3.19
Ppp1r42Q8R1Z4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Ppp1r42Q8R1Z4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC34.9■■■■□ 3.18
Ppp1r42Q8R1Z4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ppp1r42Q8R1Z4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ppp1r42Q8R1Z4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.83■■■■□ 3.17
Ppp1r42Q8R1Z4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Ppp1r42Q8R1Z4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ppp1r42Q8R1Z4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.75■■■■□ 3.15
Ppp1r42Q8R1Z4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Ppp1r42Q8R1Z4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Ppp1r42Q8R1Z4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Ppp1r42Q8R1Z4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
Ppp1r42Q8R1Z4 Gm25262-201ENSMUST00000174934 133 ntBASIC34.65■■■■□ 3.14
Ppp1r42Q8R1Z4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ppp1r42Q8R1Z4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms