RNA–Protein interactions for RNA: ENSMUST00000029682.10

Thbs3-201, Transcript of Thrombospondin-3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Thbs3, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3-201ENSMUST00000029682 Rrp9Q91WM3 475 aaKnown RBP11.65□□□□□ -0.54
Thbs3-201ENSMUST00000029682 Map3k19E9Q3S4 1311 aa11.65□□□□□ -0.54
Thbs3-201ENSMUST00000029682 Q3UPC7 1272 aa11.65□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Cdc37l1Q9CZP7 335 aa11.65□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Naip7Q9JIB3 1402 aa11.65□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Vamp4O70480 141 aa11.64□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Nsd3Q6P2L6 1439 aa11.64□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Ythdc1E9Q5K9 736 aaKnown RBP11.64□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Birc3O08863 600 aa11.64□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Terf2O35144 541 aa11.64□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Ppp1r15aP17564 657 aa11.63□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Afap1Q80YS6 731 aa11.63□□□□□ -0.55
Thbs3-201ENSMUST00000029682 KnstrnQ9D9Z1 312 aaKnown RBP11.63□□□□□ -0.55
Thbs3-201ENSMUST00000029682 MvpQ9EQK5 861 aa11.63□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Aplp1Q03157 653 aa11.62□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Wwc1Q5SXA9 1104 aa11.62□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Vsig10D3YX43 558 aa11.61□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Gnai1B2RSH2 354 aa11.61□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Ankrd44B2RXR6 993 aa11.61□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Gnai3Q9DC51 354 aa11.61□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Synj2Q9D2G5 1434 aa11.61□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Kif13aQ9EQW7 1749 aa11.6□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Itsn1Q9Z0R4 1714 aa11.6□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Rsph4aQ8BYM7 716 aa11.6□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Senp3Q9EP97 568 aaKnown RBP11.6□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Uhrf1bp1lA2RSJ4 1457 aa11.6□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Gm10093D3YYI8 482 aa11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Hdac1O09106 482 aaKnown RBP11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 LifrP42703 1092 aa11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Scaf1Q5U4C3 1256 aaKnown RBP11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Cetn4Q8K4K1 168 aa11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Chmp4bQ9D8B3 224 aaKnown RBP11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 TimelessQ9R1X4 1197 aa11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Asxl2Q8BZ32 1370 aa11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Wdr63B2RY71 923 aa11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Znf316Q6PGE4 1016 aa11.59□□□□□ -0.55
Thbs3-201ENSMUST00000029682 Nwd1A6H603 1563 aa11.58□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Irf5P56477 497 aa11.58□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Mcm10Q0VBD2 885 aa11.58□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Rsph6aQ8CDR2 708 aa11.58□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Cabp2Q9JLK4 216 aa11.58□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Ssh1Q76I79 1042 aa11.57□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Usp16Q99LG0 825 aa11.57□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Mcm4P49717 862 aa11.57□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Nsfl1cQ9CZ44 370 aaKnown RBP11.57□□□□□ -0.56
Thbs3-201ENSMUST00000029682 PplQ9R269 1755 aa11.57□□□□□ -0.56
Thbs3-201ENSMUST00000029682 4933402E13RikQ9D4D2 429 aa11.57□□□□□ -0.56
Thbs3-201ENSMUST00000029682 CarsQ9ER72 831 aaKnown RBP11.57□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Cavin2Q63918 418 aaKnown RBP11.56□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Idi2Q8BFZ6 227 aa11.56□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Tbc1d9Q3UYK3 1264 aa11.56□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Trim27Q62158 513 aa11.56□□□□□ -0.56
Thbs3-201ENSMUST00000029682 U2surpQ6NV83 1029 aaKnown RBP11.56□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Rfx1P48377 963 aa11.55□□□□□ -0.56
Thbs3-201ENSMUST00000029682 MarsQ68FL6 902 aaKnown RBP11.55□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Tfip11Q9ERA6 838 aaKnown RBP11.55□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Sos1Q62245 1319 aa11.55□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Ercc6l2Q9JIM3 1537 aa11.55□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Lmod3E9QA62 571 aa11.55□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Nek4Q9Z1J2 792 aa11.55□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Ddit3P35639 168 aa11.54□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Arid3aQ62431 601 aa11.54□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Klhdc4Q921I2 584 aa11.54□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Spef2Q8C9J3 1734 aa11.54□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Ncapd2Q8K2Z4 1392 aa11.54□□□□□ -0.56
Thbs3-201ENSMUST00000029682 PtpruB1AUH1 1446 aa11.54□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Ric3Q8BPM6 367 aa11.53□□□□□ -0.56
Thbs3-201ENSMUST00000029682 GorabQ8BRM2 368 aa11.53□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Plin1Q8CGN5 517 aa11.53□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Dip2aQ8BWT5 1523 aa11.53□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Plcb2A3KGF7 1181 aa11.53□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Hoxb7P09024 217 aa11.53□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Rsph3aQ3UFY4 516 aa11.53□□□□□ -0.56
Thbs3-201ENSMUST00000029682 Il4rP16382 810 aa11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Cgnl1Q6AW69 1298 aa11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Ppp1r18Q8BQ30 594 aa11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Zc3h13E9Q784 1729 aaKnown RBP11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 SlkO54988 1233 aa11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Psme1P97371 249 aa11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Aldh8a1Q8BH00 487 aa11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Kdm4cQ8VCD7 1054 aa11.52□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Kif1aP33173 1695 aa11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 CatipB9EKE5 520 aa11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Eif4g2Q62448 906 aaKnown RBP11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 HnrnpuQ8VEK3 800 aaKnown RBP11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Kif24Q6NWW5 1356 aa11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Stk31Q99MW1 1018 aa11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Ccdc146E9Q9F7 977 aa11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Eif4a2P10630 407 aa11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Phf14Q9D4H9 881 aa11.51□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Txndc2Q6P902 515 aa11.5□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Rab11fip3Q8CHD8 1047 aa11.5□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Aldh1l2Q8K009 923 aa11.5□□□□□ -0.57
Thbs3-201ENSMUST00000029682 NpatQ8BMA5 1420 aa11.5□□□□□ -0.57
Thbs3-201ENSMUST00000029682 BccipQ9CWI3 316 aa11.5□□□□□ -0.57
Thbs3-201ENSMUST00000029682 CenppQ9CZ92 286 aa11.5□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Aifm3Q3TY86 605 aa11.49□□□□□ -0.57
Thbs3-201ENSMUST00000029682 FanclQ9CR14 375 aa11.49□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Gemin5Q8BX17 1502 aaKnown RBP11.49□□□□□ -0.57
Thbs3-201ENSMUST00000029682 Triml2E9PW10 424 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 551.2 ms