RNA–Protein interactions for RNA: ENSMUST00000029682.10

Thbs3-201, Transcript of Thrombospondin-3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Thbs3, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3-201ENSMUST00000029682 NischQ80TM9 1593 aa17.6■□□□□ 0.41
Thbs3-201ENSMUST00000029682 Gm35339A0A140LHH9 1649 aa17.2■□□□□ 0.34
Thbs3-201ENSMUST00000029682 Abcc9P70170 1546 aa17.1■□□□□ 0.33
Thbs3-201ENSMUST00000029682 Abcc8B2RUS7 1588 aa16.68■□□□□ 0.26
Thbs3-201ENSMUST00000029682 Rhox8Q6VSS7 320 aa16.47■□□□□ 0.23
Thbs3-201ENSMUST00000029682 Rtl1Q7M732 1744 aa16.29■□□□□ 0.2
Thbs3-201ENSMUST00000029682 Ccdc180J3QNE4 1664 aa16.05■□□□□ 0.16
Thbs3-201ENSMUST00000029682 Zcchc6Q5BLK4 1491 aaKnown RBP15.74■□□□□ 0.11
Thbs3-201ENSMUST00000029682 Dcaf1Q80TR8 1506 aa15.59■□□□□ 0.09
Thbs3-201ENSMUST00000029682 ScribQ80U72 1612 aa15.47■□□□□ 0.07
Thbs3-201ENSMUST00000029682 Rpgrip1Q9EPQ2 1331 aa15.44■□□□□ 0.06
Thbs3-201ENSMUST00000029682 Rb1cc1Q9ESK9 1588 aa15.42■□□□□ 0.06
Thbs3-201ENSMUST00000029682 HrcG5E8J6 738 aa15.32■□□□□ 0.04
Thbs3-201ENSMUST00000029682 Ccdc136Q3TVA9 1136 aa15.26■□□□□ 0.03
Thbs3-201ENSMUST00000029682 Baz1aO88379 1555 aa15.25■□□□□ 0.03
Thbs3-201ENSMUST00000029682 Kdm5dQ62240 1548 aa15.22■□□□□ 0.03
Thbs3-201ENSMUST00000029682 Acin1Q9JIX8 1338 aaKnown RBP15.18■□□□□ 0.02
Thbs3-201ENSMUST00000029682 Ehmt2Q9Z148 1263 aaKnown RBP15.09■□□□□ 0.01
Thbs3-201ENSMUST00000029682 NacadQ5SWP3 1504 aa15.07■□□□□ 0
Thbs3-201ENSMUST00000029682 Trim41Q5NCC3 630 aa14.99□□□□□ -0.01
Thbs3-201ENSMUST00000029682 Crybg2B7ZCC2 1516 aa14.95□□□□□ -0.02
Thbs3-201ENSMUST00000029682 Smarca2Q6DIC0 1577 aa14.92□□□□□ -0.02
Thbs3-201ENSMUST00000029682 Pcgf6Q99NA9 353 aa14.86□□□□□ -0.03
Thbs3-201ENSMUST00000029682 Cep164Q5DU05 1446 aa14.82□□□□□ -0.04
Thbs3-201ENSMUST00000029682 Sycp2Q9CUU3 1500 aa14.75□□□□□ -0.05
Thbs3-201ENSMUST00000029682 Rsf1E9PWW9 1441 aaKnown RBP14.6□□□□□ -0.07
Thbs3-201ENSMUST00000029682 Brd4Q9ESU6 1400 aaKnown RBP14.59□□□□□ -0.07
Thbs3-201ENSMUST00000029682 Chic1Q8CBW7 227 aa14.58□□□□□ -0.08
Thbs3-201ENSMUST00000029682 Cngb1E1AZ71 1325 aa14.58□□□□□ -0.08
Thbs3-201ENSMUST00000029682 Cecr2E9Q2Z1 1453 aa14.55□□□□□ -0.08
Thbs3-201ENSMUST00000029682 Golga3P55937 1487 aa14.49□□□□□ -0.09
Thbs3-201ENSMUST00000029682 Gab3Q8BSM5 595 aa14.48□□□□□ -0.09
Thbs3-201ENSMUST00000029682 Supt5hO55201 1082 aaKnown RBP14.48□□□□□ -0.09
Thbs3-201ENSMUST00000029682 Ccdc88bQ4QRL3 1481 aa14.47□□□□□ -0.09
Thbs3-201ENSMUST00000029682 Neurod1Q60867 357 aa14.45□□□□□ -0.1
Thbs3-201ENSMUST00000029682 Synj1Q8CHC4 1574 aa14.44□□□□□ -0.1
Thbs3-201ENSMUST00000029682 BicraF8VPZ9 1578 aa14.4□□□□□ -0.1
Thbs3-201ENSMUST00000029682 CftrP26361 1476 aa14.35□□□□□ -0.11
Thbs3-201ENSMUST00000029682 Esf1Q3V1V3 845 aaKnown RBP14.3□□□□□ -0.12
Thbs3-201ENSMUST00000029682 Top2bQ64511 1612 aa14.28□□□□□ -0.12
Thbs3-201ENSMUST00000029682 NefmP08553 848 aa14.24□□□□□ -0.13
Thbs3-201ENSMUST00000029682 Mier1Q5UAK0 511 aa14.24□□□□□ -0.13
Thbs3-201ENSMUST00000029682 Cttnbp2B9EJA2 1648 aa14.23□□□□□ -0.13
Thbs3-201ENSMUST00000029682 Zeb1Q64318 1117 aa14.17□□□□□ -0.14
Thbs3-201ENSMUST00000029682 Smarca4Q3TKT4 1613 aaKnown RBP14.13□□□□□ -0.15
Thbs3-201ENSMUST00000029682 1700123L14RikQ3V2K7 440 aa14.13□□□□□ -0.15
Thbs3-201ENSMUST00000029682 Cc2d2aQ8CFW7 1633 aa14.13□□□□□ -0.15
Thbs3-201ENSMUST00000029682 Rapgef2Q8CHG7 1496 aa14.1□□□□□ -0.15
Thbs3-201ENSMUST00000029682 Las1lA2BE28 776 aaKnown RBP14.08□□□□□ -0.15
Thbs3-201ENSMUST00000029682 Fmn1Q05860 1466 aa14.07□□□□□ -0.16
Thbs3-201ENSMUST00000029682 Csrnp3P59055 597 aa14.07□□□□□ -0.16
Thbs3-201ENSMUST00000029682 Top2aQ01320 1528 aaKnown RBP14.03□□□□□ -0.16
Thbs3-201ENSMUST00000029682 Gm38655A0A286YDK6 273 aa14□□□□□ -0.17
Thbs3-201ENSMUST00000029682 UbtfP25976 765 aaKnown RBP13.99□□□□□ -0.17
Thbs3-201ENSMUST00000029682 Sall2Q9QX96 1004 aa13.99□□□□□ -0.17
Thbs3-201ENSMUST00000029682 Cep162Q6ZQ06 1403 aa13.98□□□□□ -0.17
Thbs3-201ENSMUST00000029682 Iqgap2Q3UQ44 1575 aa13.93□□□□□ -0.18
Thbs3-201ENSMUST00000029682 CenpbP27790 599 aa13.92□□□□□ -0.18
Thbs3-201ENSMUST00000029682 Myt1lP97500 1187 aa13.92□□□□□ -0.18
Thbs3-201ENSMUST00000029682 DiexfQ8BTT6 772 aaKnown RBP13.89□□□□□ -0.19
Thbs3-201ENSMUST00000029682 Npm2Q80W85 207 aa13.86□□□□□ -0.19
Thbs3-201ENSMUST00000029682 Atad2bE9Q166 1460 aaKnown RBP13.83□□□□□ -0.2
Thbs3-201ENSMUST00000029682 Eif4g1Q6NZJ6 1600 aaKnown RBP13.83□□□□□ -0.2
Thbs3-201ENSMUST00000029682 Aebp2Q9Z248 504 aaKnown RBP13.81□□□□□ -0.2
Thbs3-201ENSMUST00000029682 Clip1Q922J3 1391 aa13.8□□□□□ -0.2
Thbs3-201ENSMUST00000029682 Wdr66E9Q743 1299 aa13.78□□□□□ -0.2
Thbs3-201ENSMUST00000029682 TnnQ80Z71 1560 aa13.77□□□□□ -0.2
Thbs3-201ENSMUST00000029682 Ppargc1bQ8VHJ7 1014 aa13.77□□□□□ -0.21
Thbs3-201ENSMUST00000029682 Plekhg3Q4VAC9 1341 aa13.75□□□□□ -0.21
Thbs3-201ENSMUST00000029682 ClspnQ80YR7 1315 aa13.73□□□□□ -0.21
Thbs3-201ENSMUST00000029682 Pds5bQ4VA53 1446 aaKnown RBP13.73□□□□□ -0.21
Thbs3-201ENSMUST00000029682 Anks4bQ8K3X6 423 aa13.71□□□□□ -0.21
Thbs3-201ENSMUST00000029682 Arhgap35Q91YM2 1499 aa13.7□□□□□ -0.22
Thbs3-201ENSMUST00000029682 TonslQ6NZL6 1363 aa13.7□□□□□ -0.22
Thbs3-201ENSMUST00000029682 Ncapd3Q6ZQK0 1506 aa13.7□□□□□ -0.22
Thbs3-201ENSMUST00000029682 Bcl11aQ9QYE3 773 aa13.68□□□□□ -0.22
Thbs3-201ENSMUST00000029682 PtprkP35822 1457 aa13.67□□□□□ -0.22
Thbs3-201ENSMUST00000029682 NrkQ9R0G8 1455 aa13.67□□□□□ -0.22
Thbs3-201ENSMUST00000029682 Frmpd1A2AKB4 1549 aa13.65□□□□□ -0.22
Thbs3-201ENSMUST00000029682 Thoc2B1AZI6 1594 aaKnown RBP13.63□□□□□ -0.23
Thbs3-201ENSMUST00000029682 Eea1Q8BL66 1411 aa13.63□□□□□ -0.23
Thbs3-201ENSMUST00000029682 Arap1Q4LDD4 1452 aa13.62□□□□□ -0.23
Thbs3-201ENSMUST00000029682 Wdr62Q3U3T8 1523 aa13.62□□□□□ -0.23
Thbs3-201ENSMUST00000029682 Lamc3Q9R0B6 1581 aa13.62□□□□□ -0.23
Thbs3-201ENSMUST00000029682 Cdk11bP24788 784 aaKnown RBP13.61□□□□□ -0.23
Thbs3-201ENSMUST00000029682 Nop58Q6DFW4 536 aaKnown RBP13.61□□□□□ -0.23
Thbs3-201ENSMUST00000029682 Il27Q8K3I6 234 aa13.58□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Shroom4Q1W617 1475 aa13.58□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Kif15Q6P9L6 1387 aa13.57□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Arhgef5E9Q7D5 1581 aa13.57□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Myt1Q8CFC2 1127 aa13.57□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Setd5Q5XJV7 1441 aa13.56□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Map3k1P53349 1493 aa13.56□□□□□ -0.24
Thbs3-201ENSMUST00000029682 PrkcshO08795 521 aa13.55□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Ccdc18Q640L5 1455 aa13.54□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Ap3b1Q9Z1T1 1105 aa13.54□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Camsap1A2AHC3 1581 aa13.53□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Kdm5bQ80Y84 1544 aa13.52□□□□□ -0.24
Thbs3-201ENSMUST00000029682 Aplp2Q06335 707 aa13.5□□□□□ -0.25
Thbs3-201ENSMUST00000029682 Ifnlr1Q8CGK5 535 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms