RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Rapgef3Q8VCC8 918 aa28.4■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Camta1A2A891 1682 aa28.4■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Eif4a2P10630 407 aa28.39■■■□□ 2.14
Ptx3-201ENSMUST00000029421 PaskQ8CEE6 1383 aa28.39■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Gm21190A0A0G2JGJ6 266 aa28.38■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Col18a1P39061 1774 aa28.36■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Cabp4Q8VHC5 271 aa28.35■■■□□ 2.13
Ptx3-201ENSMUST00000029421 FancaQ9JL70 1439 aa28.35■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Nckap5lQ6GQX2 1323 aa28.35■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Swt1Q9DBQ9 907 aa28.34■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Scaf1Q5U4C3 1256 aaKnown RBP28.34■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Znf521Q6KAS7 1311 aa28.33■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Evi5lH3BKQ3 813 aa28.33■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Ipo8Q7TMY7 1010 aa28.33■■■□□ 2.13
Ptx3-201ENSMUST00000029421 Ksr2Q3UVC0 959 aa28.32■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Trim58Q5NCC9 485 aa28.32■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Ltbp4Q8K4G1 1666 aa28.3■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Atp7bQ64446 1462 aa28.3■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Irx3P81067 507 aa28.3■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Mcm10Q0VBD2 885 aa28.29■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Wdr17E9Q271 1322 aa28.29■■■□□ 2.12
Ptx3-201ENSMUST00000029421 MpripP97434 1024 aa28.28■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Rad17Q6NXW6 688 aa28.28■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Ano8Q6PB70 1060 aa28.28■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Fyb1O35601 819 aa28.27■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Ecm2Q5FW85 670 aa28.27■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Pip4k2bQ80XI4 416 aa28.27■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Sart3Q9JLI8 962 aaKnown RBP28.27■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Ccar1Q8CH18 1146 aaKnown RBP28.27■■■□□ 2.12
Ptx3-201ENSMUST00000029421 Apbb1Q9QXJ1 710 aa28.27■■■□□ 2.12
Ptx3-201ENSMUST00000029421 PtprvP70289 1705 aa28.26■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Ncapd2Q8K2Z4 1392 aa28.26■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Ttc21aQ8C0S4 1314 aa28.26■■■□□ 2.11
Ptx3-201ENSMUST00000029421 DaxxO35613 739 aa28.26■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Ncoa4Q5U4H9 625 aa28.26■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Kcna6Q61923 529 aa28.25■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Dbr1Q923B1 550 aa28.25■■■□□ 2.11
Ptx3-201ENSMUST00000029421 TimelessQ9R1X4 1197 aa28.25■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Wnk3Q80XP9 1757 aa28.24■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Cabp2Q9JLK4 216 aa28.24■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Parp14Q2EMV9 1817 aa28.24■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Gimap6Q8K349 305 aa28.23■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Ankrd50F7BE84 1390 aa28.23■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Zfp777B9EKF4 885 aa28.23■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Stk31Q99MW1 1018 aa28.22■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Hoxc9P09633 260 aa28.21■■■□□ 2.11
Ptx3-201ENSMUST00000029421 4933416C03RikQ3V063 378 aa28.21■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Farp2Q91VS8 1065 aa28.21■■■□□ 2.11
Ptx3-201ENSMUST00000029421 Plin1Q8CGN5 517 aa28.19■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Trim30dE9PWL0 497 aa28.19■■■□□ 2.1
Ptx3-201ENSMUST00000029421 CastP51125 788 aa28.19■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Rbm25B2RY56 838 aaKnown RBP28.18■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Ccdc183A2AJB1 534 aa28.17■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Eya1P97767 591 aa28.17■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Atf3Q60765 181 aa28.17■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Polr3glQ8R0C0 218 aa28.17■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Amigo3Q8C2S7 508 aa28.17■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Trim26Q99PN3 545 aa28.17■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Ak7Q9D2H2 614 aa28.17■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Nfat5Q9WV30 1534 aa28.16■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Slit2Q9R1B9 1521 aa28.16■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Gtf3c3Q3TMP1 882 aa28.16■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Robo1O89026 1612 aa28.15■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Hsp90ab1P11499 724 aaKnown RBP28.15■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Ccne1Q61457 408 aa28.15■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Ppp1r9bQ6R891 817 aaKnown RBP28.15■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Tmem132eQ6IEE6 982 aa28.14■■■□□ 2.1
Ptx3-201ENSMUST00000029421 Atl3Q91YH5 541 aa28.14■■■□□ 2.1
Ptx3-201ENSMUST00000029421 GnpatP98192 678 aa28.13■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Tspyl2Q7TQI8 677 aa28.13■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Pdlim2Q8R1G6 349 aa28.13■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Ptpn23Q6PB44 1692 aa28.13■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Htatsf1Q8BGC0 757 aa28.12■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Kcnh5Q920E3 988 aa28.12■■■□□ 2.09
Ptx3-201ENSMUST00000029421 PrkcshO08795 521 aa28.12■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Cdc37l1Q9CZP7 335 aa28.12■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Gnai1B2RSH2 354 aa28.1■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Gnai3Q9DC51 354 aa28.1■■■□□ 2.09
Ptx3-201ENSMUST00000029421 TatQ8QZR1 454 aa28.1■■■□□ 2.09
Ptx3-201ENSMUST00000029421 TmpoQ61033 693 aaKnown RBP28.09■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Pank1Q8K4K6 548 aa28.09■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Hs1bp3Q3TC93 395 aa28.08■■■□□ 2.09
Ptx3-201ENSMUST00000029421 Siglec1Q62230 1695 aa28.08■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Ccdc171E9Q1U1 1324 aa28.06■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Ppp2r3aB2RXC8 1150 aa28.06■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Duxf3A0A0N4SV92 674 aa28.05■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Dnajc10Q9DC23 793 aa28.05■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Fmnl2A2APV2 1086 aa28.04■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Dzip1Q8BMD2 852 aa28.04■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Ccdc60Q8C4J0 545 aa28.04■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Eif2s2Q99L45 331 aaKnown RBP28.04■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Ddx17Q501J6 650 aaKnown RBP28.03■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Rab11fip3Q8CHD8 1047 aa28.02■■■□□ 2.08
Ptx3-201ENSMUST00000029421 Trpm3Q5F4S9 1721 aa28.01■■■□□ 2.07
Ptx3-201ENSMUST00000029421 Dixdc1Q80Y83 711 aa28■■■□□ 2.07
Ptx3-201ENSMUST00000029421 Vamp4O70480 141 aa28■■■□□ 2.07
Ptx3-201ENSMUST00000029421 G3bp1P97855 465 aaKnown RBP27.99■■■□□ 2.07
Ptx3-201ENSMUST00000029421 TnrQ8BYI9 1358 aa27.98■■■□□ 2.07
Ptx3-201ENSMUST00000029421 Usp16Q99LG0 825 aa27.98■■■□□ 2.07
Ptx3-201ENSMUST00000029421 Sos1Q62245 1319 aa27.98■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms