RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B UBP3Q01477 912 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
YNL054W-BYNL054W-B AIM7Q12156 149 aa1.17□□□□□ -2.22
YNL054W-BYNL054W-B AFT2Q08957 416 aa1.17□□□□□ -2.22
YNL054W-BYNL054W-B TRP3P00937 484 aa1.17□□□□□ -2.22
YNL054W-BYNL054W-B SEG2P34250 1132 aa1.17□□□□□ -2.22
YNL054W-BYNL054W-B SOK2P53438 785 aaPredicted RBP1.17□□□□□ -2.22
YNL054W-BYNL054W-B KIN2P13186 1147 aaKnown RBP1.16□□□□□ -2.22
YNL054W-BYNL054W-B VAN1P23642 535 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B OAR1P35731 278 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B HSP78P33416 811 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B APM2P38700 605 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B YER156CP40093 338 aaKnown RBP1.16□□□□□ -2.22
YNL054W-BYNL054W-B SUT1P53032 299 aaKnown RBP1.16□□□□□ -2.22
YNL054W-BYNL054W-B MDL2P33311 773 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B CUE2P36075 443 aaKnown RBP1.16□□□□□ -2.22
YNL054W-BYNL054W-B LDH1P38139 375 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B NEO1P40527 1151 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B NAR1P23503 491 aaKnown RBP1.16□□□□□ -2.22
YNL054W-BYNL054W-B HCM1P25364 564 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B YHL008CP38750 627 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B SSN3P39073 555 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B YNR063WP53749 607 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B YNR065CP53751 1116 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B CDC55Q00362 526 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B AIM39Q08223 395 aa1.16□□□□□ -2.22
YNL054W-BYNL054W-B CYT1P07143 309 aa1.15□□□□□ -2.22
YNL054W-BYNL054W-B SPR3P41901 512 aa1.15□□□□□ -2.22
YNL054W-BYNL054W-B DAS1P47005 663 aa1.15□□□□□ -2.22
YNL054W-BYNL054W-B MNN10P50108 393 aaKnown RBP1.15□□□□□ -2.23
YNL054W-BYNL054W-B SPT20P50875 604 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B SKP1P52286 194 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B CTF4Q01454 927 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B PUS9Q12069 462 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B SLA1P32790 1244 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B NNK1P36003 928 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B RSB1Q08417 382 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B TY4B-PA0A0B7P3V8 1104 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B ARL1P38116 183 aaKnown RBP1.15□□□□□ -2.23
YNL054W-BYNL054W-B CCZ1P38273 704 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B SLX8P40072 274 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B YML083CQ04526 418 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B RXT3Q07458 294 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B TY4A-HQ6Q5P6 413 aa1.15□□□□□ -2.23
YNL054W-BYNL054W-B TY1B-DR4Q07793 1604 aa1.14□□□□□ -2.23
YNL054W-BYNL054W-B DED1P06634 604 aaKnown RBP1.14□□□□□ -2.23
YNL054W-BYNL054W-B PEP7P32609 515 aa1.14□□□□□ -2.23
YNL054W-BYNL054W-B SHM2P37291 469 aaKnown RBP1.14□□□□□ -2.23
YNL054W-BYNL054W-B ORC3P54790 616 aa1.14□□□□□ -2.23
YNL054W-BYNL054W-B HCA4P20448 770 aaKnown RBP1.14□□□□□ -2.23
YNL054W-BYNL054W-B FET4P40988 552 aa1.14□□□□□ -2.23
YNL054W-BYNL054W-B TY1A-NL1Q12391 440 aaKnown RBP1.14□□□□□ -2.23
YNL054W-BYNL054W-B HAP4P14064 554 aa1.14□□□□□ -2.23
YNL054W-BYNL054W-B RPL34AP87262 121 aaPredicted RBP1.14□□□□□ -2.23
YNL054W-BYNL054W-B ENT2Q05785 613 aa1.14□□□□□ -2.23
YNL054W-BYNL054W-B TIF6Q12522 245 aaKnown RBP1.14□□□□□ -2.23
YNL054W-BYNL054W-B SRO9P25567 434 aaKnown RBP1.14□□□□□ -2.23
YNL054W-BYNL054W-B TED1P40533 473 aa1.14□□□□□ -2.23
YNL054W-BYNL054W-B RPS6AP0CX37 236 aaKnown RBP1.13□□□□□ -2.23
YNL054W-BYNL054W-B RPS6BP0CX38 236 aaPredicted RBP1.13□□□□□ -2.23
YNL054W-BYNL054W-B TOD6P34219 525 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B ISW1P38144 1129 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B CTH1P47976 325 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B SOG2Q08817 791 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B GFA1P14742 717 aaKnown RBP1.13□□□□□ -2.23
YNL054W-BYNL054W-B AIM3P38266 947 aaKnown RBP1.13□□□□□ -2.23
YNL054W-BYNL054W-B MRPL22P53881 309 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B TRE1Q08919 783 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B BIO2P32451 375 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B YAP1801P38856 637 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B MTR4P47047 1073 aaKnown RBP1.13□□□□□ -2.23
YNL054W-BYNL054W-B RSM24Q03976 319 aa1.13□□□□□ -2.23
YNL054W-BYNL054W-B CTS1P29029 562 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B PRO1P32264 428 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B GCV1P48015 400 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B DOT1Q04089 582 aaKnown RBP1.12□□□□□ -2.23
YNL054W-BYNL054W-B LAP2Q10740 671 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B TMT1P32643 299 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B AIM9P40053 627 aaKnown RBP1.12□□□□□ -2.23
YNL054W-BYNL054W-B ENO1P00924 437 aaKnown RBP1.12□□□□□ -2.23
YNL054W-BYNL054W-B RDS2P19541 446 aaKnown RBP1.12□□□□□ -2.23
YNL054W-BYNL054W-B CDA2Q06703 312 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B TOM1Q03280 3268 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B NMD3P38861 518 aaKnown RBP1.12□□□□□ -2.23
YNL054W-BYNL054W-B KRI1P42846 591 aaKnown RBP1.12□□□□□ -2.23
YNL054W-BYNL054W-B PPT1P53043 513 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B HBT1Q07653 1046 aaKnown RBP1.12□□□□□ -2.23
YNL054W-BYNL054W-B CBC2Q08920 208 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
YNL054W-BYNL054W-B ICT1Q12385 394 aa1.12□□□□□ -2.23
YNL054W-BYNL054W-B NOP1P15646 327 aaKnown RBP1.11□□□□□ -2.23
YNL054W-BYNL054W-B PAN5P38787 379 aa1.11□□□□□ -2.23
YNL054W-BYNL054W-B YOR296WQ08748 1289 aa1.11□□□□□ -2.23
YNL054W-BYNL054W-B PRE10P21242 288 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
YNL054W-BYNL054W-B SMC1P32908 1225 aa1.11□□□□□ -2.23
YNL054W-BYNL054W-B WHI3P34761 661 aaKnown RBP1.11□□□□□ -2.23
YNL054W-BYNL054W-B STB2P46679 850 aa1.11□□□□□ -2.23
YNL054W-BYNL054W-B NUP42P49686 430 aaKnown RBP1.11□□□□□ -2.23
YNL054W-BYNL054W-B YAP7Q08182 245 aa1.11□□□□□ -2.23
YNL054W-BYNL054W-B THS1P04801 734 aaKnown RBP1.11□□□□□ -2.23
YNL054W-BYNL054W-B RPS13P05756 151 aaKnown RBP1.11□□□□□ -2.23
YNL054W-BYNL054W-B DMC1P25453 334 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms