RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C TY1B-JR2P47100 1755 aaKnown RBP6.13□□□□□ -1.43
EAR1YMR171C TY1B-ER2Q03619 1755 aa6.13□□□□□ -1.43
EAR1YMR171C TY1B-MR1Q04214 1755 aa6.13□□□□□ -1.43
EAR1YMR171C TY1B-MR2Q04670 1755 aaKnown RBP6.13□□□□□ -1.43
EAR1YMR171C TY1B-LR1Q12088 1755 aaKnown RBP6.13□□□□□ -1.43
EAR1YMR171C TY1B-NL1Q12112 1755 aa6.13□□□□□ -1.43
EAR1YMR171C TY1B-GR1Q12141 1755 aa6.13□□□□□ -1.43
EAR1YMR171C TY1B-BLQ12490 1755 aa6.13□□□□□ -1.43
EAR1YMR171C LEU1P07264 779 aaKnown RBP6.13□□□□□ -1.43
EAR1YMR171C MSN1P22148 382 aa6.13□□□□□ -1.43
EAR1YMR171C SMC1P32908 1225 aa6.13□□□□□ -1.43
EAR1YMR171C GCR2Q01722 534 aa6.13□□□□□ -1.43
EAR1YMR171C OPT2Q06593 877 aa6.13□□□□□ -1.43
EAR1YMR171C CDC25P04821 1589 aa6.13□□□□□ -1.43
EAR1YMR171C TY3B-GQ99315 1547 aa6.12□□□□□ -1.43
EAR1YMR171C RPC31P17890 251 aa6.12□□□□□ -1.43
EAR1YMR171C POL5P39985 1022 aaKnown RBP6.12□□□□□ -1.43
EAR1YMR171C UBP2Q01476 1272 aa6.12□□□□□ -1.43
EAR1YMR171C RGD2P43556 714 aa6.11□□□□□ -1.43
EAR1YMR171C UBP15P50101 1230 aa6.11□□□□□ -1.43
EAR1YMR171C CDC19P00549 500 aaKnown RBP6.1□□□□□ -1.43
EAR1YMR171C BSD2P38356 321 aa6.1□□□□□ -1.43
EAR1YMR171C RAD55P38953 406 aa6.1□□□□□ -1.43
EAR1YMR171C FIR1P40020 876 aa6.1□□□□□ -1.43
EAR1YMR171C YNL011CP53980 444 aa6.1□□□□□ -1.43
EAR1YMR171C YLR346CQ06139 101 aa6.1□□□□□ -1.43
EAR1YMR171C PHO4P07270 312 aaKnown RBP6.1□□□□□ -1.43
EAR1YMR171C NAB2P32505 525 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
EAR1YMR171C NTA1P40354 457 aa6.1□□□□□ -1.43
EAR1YMR171C CDC55Q00362 526 aa6.1□□□□□ -1.43
EAR1YMR171C NTE1Q04958 1679 aa6.09□□□□□ -1.43
EAR1YMR171C ISW1P38144 1129 aa6.09□□□□□ -1.43
EAR1YMR171C GIP1P38229 639 aa6.09□□□□□ -1.43
EAR1YMR171C CUS1Q02554 436 aaPredicted RBP6.09□□□□□ -1.43
EAR1YMR171C YOR296WQ08748 1289 aa6.09□□□□□ -1.43
EAR1YMR171C RGP1P16664 663 aa6.08□□□□□ -1.44
EAR1YMR171C GLY1P37303 387 aaKnown RBP6.08□□□□□ -1.44
EAR1YMR171C PAM1P37304 830 aaKnown RBP6.08□□□□□ -1.44
EAR1YMR171C MGE1P38523 228 aa6.08□□□□□ -1.44
EAR1YMR171C OSH7P38755 437 aa6.08□□□□□ -1.44
EAR1YMR171C RSC4Q02206 625 aa6.08□□□□□ -1.44
EAR1YMR171C STB3Q12427 513 aa6.08□□□□□ -1.44
EAR1YMR171C TIF6Q12522 245 aaKnown RBP6.08□□□□□ -1.44
EAR1YMR171C VPS15P22219 1454 aa6.08□□□□□ -1.44
EAR1YMR171C DNF1P32660 1571 aa6.08□□□□□ -1.44
EAR1YMR171C SNT2P53127 1403 aa6.08□□□□□ -1.44
EAR1YMR171C YJR107WP47145 328 aa6.07□□□□□ -1.44
EAR1YMR171C SKP1P52286 194 aa6.07□□□□□ -1.44
EAR1YMR171C TY1A-BLQ12266 440 aa6.07□□□□□ -1.44
EAR1YMR171C GEA2P39993 1459 aaKnown RBP6.07□□□□□ -1.44
EAR1YMR171C CAT8P39113 1433 aa6.07□□□□□ -1.44
EAR1YMR171C SEC8P32855 1065 aa6.07□□□□□ -1.44
EAR1YMR171C IRS4P36115 615 aaKnown RBP6.07□□□□□ -1.44
EAR1YMR171C ENP1P38333 483 aaKnown RBP6.07□□□□□ -1.44
EAR1YMR171C PSY2P40164 858 aa6.07□□□□□ -1.44
EAR1YMR171C DAK2P43550 591 aa6.07□□□□□ -1.44
EAR1YMR171C SCW11P53189 542 aa6.07□□□□□ -1.44
EAR1YMR171C NOP7P53261 605 aaKnown RBP6.07□□□□□ -1.44
EAR1YMR171C RPO21P04050 1733 aaKnown RBP6.07□□□□□ -1.44
EAR1YMR171C IRC20Q06554 1556 aa6.06□□□□□ -1.44
EAR1YMR171C NAM8Q00539 523 aaKnown RBP6.06□□□□□ -1.44
EAR1YMR171C OYE2Q03558 400 aaKnown RBP6.06□□□□□ -1.44
EAR1YMR171C BSC2Q05611 235 aa6.06□□□□□ -1.44
EAR1YMR171C SEC3P33332 1336 aaKnown RBP6.06□□□□□ -1.44
EAR1YMR171C GCN2P15442 1659 aa6.05□□□□□ -1.44
EAR1YMR171C GCD6P32501 712 aaKnown RBP6.05□□□□□ -1.44
EAR1YMR171C RPT1P33299 467 aaKnown RBP6.05□□□□□ -1.44
EAR1YMR171C SAM37P50110 327 aa6.05□□□□□ -1.44
EAR1YMR171C MET22P32179 357 aa6.04□□□□□ -1.44
EAR1YMR171C MRPL16P38064 232 aa6.04□□□□□ -1.44
EAR1YMR171C YBR287WP38355 427 aa6.04□□□□□ -1.44
EAR1YMR171C ITC1P53125 1264 aa6.04□□□□□ -1.44
EAR1YMR171C EMG1Q06287 252 aaKnown RBP6.04□□□□□ -1.44
EAR1YMR171C RPA190P10964 1664 aaKnown RBP6.04□□□□□ -1.44
EAR1YMR171C PDR10P51533 1564 aa6.04□□□□□ -1.44
EAR1YMR171C VPS35P34110 944 aa6.04□□□□□ -1.44
EAR1YMR171C YNR040WP53736 256 aa6.04□□□□□ -1.44
EAR1YMR171C LCB5Q06147 687 aaKnown RBP6.04□□□□□ -1.44
EAR1YMR171C NOC3Q07896 663 aaPredicted RBP6.04□□□□□ -1.44
EAR1YMR171C MET1P36150 593 aa6.03□□□□□ -1.44
EAR1YMR171C APM2P38700 605 aa6.03□□□□□ -1.44
EAR1YMR171C AIM46P38885 310 aa6.03□□□□□ -1.44
EAR1YMR171C FYV10P40492 516 aa6.03□□□□□ -1.44
EAR1YMR171C YDR444WQ04093 687 aa6.03□□□□□ -1.44
EAR1YMR171C YIL165CP40446 119 aa6.02□□□□□ -1.45
EAR1YMR171C BNI1P41832 1953 aa6.01□□□□□ -1.45
EAR1YMR171C NUP159P40477 1460 aa6.01□□□□□ -1.45
EAR1YMR171C SRB8P25648 1427 aa6.01□□□□□ -1.45
EAR1YMR171C CIC1P38779 376 aaKnown RBP6.01□□□□□ -1.45
EAR1YMR171C INP54Q08227 384 aaKnown RBP6.01□□□□□ -1.45
EAR1YMR171C MCM2P29469 868 aa6.01□□□□□ -1.45
EAR1YMR171C NCL1P38205 684 aaKnown RBP6.01□□□□□ -1.45
EAR1YMR171C CTR9P89105 1077 aa6.01□□□□□ -1.45
EAR1YMR171C MET10P39692 1035 aa6□□□□□ -1.45
EAR1YMR171C ROG3P43602 733 aa6□□□□□ -1.45
EAR1YMR171C TY1A-MR1Q04215 440 aa6□□□□□ -1.45
EAR1YMR171C TOS4Q06266 489 aa6□□□□□ -1.45
EAR1YMR171C ARO1P08566 1588 aaKnown RBP6□□□□□ -1.45
EAR1YMR171C DIT1P21623 536 aa5.99□□□□□ -1.45
EAR1YMR171C YHL008CP38750 627 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms