RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B POL1P13382 1468 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B UGA3P26370 528 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B DAP1Q12091 152 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
YLR227W-BYLR227W-B RRP15Q06511 250 aaPredicted RBP4.16□□□□□ -1.74
YLR227W-BYLR227W-B PIB1Q06651 286 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B RPP0P05317 312 aaKnown RBP4.15□□□□□ -1.74
YLR227W-BYLR227W-B PRP9P19736 530 aaKnown RBP4.15□□□□□ -1.74
YLR227W-BYLR227W-B YGR117CP53270 476 aa4.15□□□□□ -1.74
YLR227W-BYLR227W-B MRD1Q06106 887 aaKnown RBP4.15□□□□□ -1.74
YLR227W-BYLR227W-B GAP1P19145 602 aaPredicted RBP4.15□□□□□ -1.74
YLR227W-BYLR227W-B PEX29Q03370 554 aa4.15□□□□□ -1.74
YLR227W-BYLR227W-B PMI40P29952 429 aaKnown RBP4.15□□□□□ -1.75
YLR227W-BYLR227W-B RRP6Q12149 733 aaKnown RBP4.15□□□□□ -1.75
YLR227W-BYLR227W-B POL3P15436 1097 aa4.15□□□□□ -1.75
YLR227W-BYLR227W-B YER158CP40095 573 aa4.15□□□□□ -1.75
YLR227W-BYLR227W-B MET13P53128 600 aa4.15□□□□□ -1.75
YLR227W-BYLR227W-B YNR061CP53747 219 aa4.15□□□□□ -1.75
YLR227W-BYLR227W-B ACA1P39970 489 aa4.14□□□□□ -1.75
YLR227W-BYLR227W-B PRP42Q03776 544 aaKnown RBP4.14□□□□□ -1.75
YLR227W-BYLR227W-B ECM30Q06673 1274 aa4.14□□□□□ -1.75
YLR227W-BYLR227W-B AIR2Q12476 344 aaKnown RBP4.14□□□□□ -1.75
YLR227W-BYLR227W-B SFB3P38810 929 aa4.14□□□□□ -1.75
YLR227W-BYLR227W-B STM1P39015 273 aaKnown RBP4.14□□□□□ -1.75
YLR227W-BYLR227W-B HOM2P13663 365 aaKnown RBP4.14□□□□□ -1.75
YLR227W-BYLR227W-B GRS1P38088 690 aaKnown RBP4.14□□□□□ -1.75
YLR227W-BYLR227W-B SLN1P39928 1220 aaPredicted RBP4.14□□□□□ -1.75
YLR227W-BYLR227W-B RPN3P40016 523 aaKnown RBP4.14□□□□□ -1.75
YLR227W-BYLR227W-B PHM7Q12252 991 aa4.14□□□□□ -1.75
YLR227W-BYLR227W-B BUD16P39988 312 aa4.14□□□□□ -1.75
YLR227W-BYLR227W-B MPH3P0CE00 602 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B STE4P18851 423 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B RAD53P22216 821 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B HCM1P25364 564 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B MOB1P40484 314 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B HRQ1Q05549 1077 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B SEG2P34250 1132 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B RVB2Q12464 471 aaKnown RBP4.13□□□□□ -1.75
YLR227W-BYLR227W-B ARO1P08566 1588 aaKnown RBP4.13□□□□□ -1.75
YLR227W-BYLR227W-B VPS35P34110 944 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B PSP2P50109 593 aaKnown RBP4.13□□□□□ -1.75
YLR227W-BYLR227W-B APL6P46682 809 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B MDM1Q01846 1127 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B HFI1Q12060 488 aa4.13□□□□□ -1.75
YLR227W-BYLR227W-B RAD3P06839 778 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B CSL4P53859 292 aaPredicted RBP4.12□□□□□ -1.75
YLR227W-BYLR227W-B YBT1P32386 1661 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B GPB2P39717 880 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B SHQ1P40486 507 aaPredicted RBP4.12□□□□□ -1.75
YLR227W-BYLR227W-B MSH4P40965 878 aaPredicted RBP4.12□□□□□ -1.75
YLR227W-BYLR227W-B YRR1Q12172 810 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B PRE10P21242 288 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
YLR227W-BYLR227W-B YNL050CP53952 270 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B VPS72Q03388 795 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B YML083CQ04526 418 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B CLF1Q12309 687 aaPredicted RBP4.12□□□□□ -1.75
YLR227W-BYLR227W-B BET2P20133 325 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B VPS4P52917 437 aa4.12□□□□□ -1.75
YLR227W-BYLR227W-B TFC4P33339 1025 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B EUG1P32474 517 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B TOS1P38288 455 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B MDR1P53258 950 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B GUT1P32190 709 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B CST26P38226 397 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B UBP12P39538 1254 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B NPA3P47122 385 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B SGM1P47166 707 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B CWC21Q03375 135 aaKnown RBP4.11□□□□□ -1.75
YLR227W-BYLR227W-B ESC2Q06340 456 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B YHR131CP38835 850 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B VPS45P38932 577 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B YML020WQ03722 664 aa4.11□□□□□ -1.75
YLR227W-BYLR227W-B SMY1P32364 656 aaKnown RBP4.1□□□□□ -1.75
YLR227W-BYLR227W-B HEF3P53978 1044 aaKnown RBP4.1□□□□□ -1.75
YLR227W-BYLR227W-B PPE1P38796 400 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B ADY4Q05955 493 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B SGF29P25554 259 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B MCM4P30665 933 aaKnown RBP4.1□□□□□ -1.75
YLR227W-BYLR227W-B PEX28P38848 579 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B FAU1P40099 211 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B SOL4P53315 255 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B NUP145P49687 1317 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B COY1P34237 679 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B RRP14P36080 434 aaKnown RBP4.1□□□□□ -1.75
YLR227W-BYLR227W-B YKR075CP36155 307 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B IML2P47031 731 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B GPR1Q12361 961 aa4.1□□□□□ -1.75
YLR227W-BYLR227W-B MDM20Q12387 796 aaKnown RBP4.1□□□□□ -1.75
YLR227W-BYLR227W-B PDC1P06169 563 aaKnown RBP4.09□□□□□ -1.75
YLR227W-BYLR227W-B PCF11P39081 626 aaPredicted RBP4.09□□□□□ -1.75
YLR227W-BYLR227W-B YJR061WP40355 935 aa4.09□□□□□ -1.75
YLR227W-BYLR227W-B FAF1P40546 346 aaPredicted RBP4.09□□□□□ -1.75
YLR227W-BYLR227W-B NSE1Q07913 336 aa4.09□□□□□ -1.75
YLR227W-BYLR227W-B MRF1P30775 413 aaPredicted RBP4.09□□□□□ -1.75
YLR227W-BYLR227W-B YKL023WP36103 277 aaKnown RBP4.09□□□□□ -1.75
YLR227W-BYLR227W-B HAL5P38970 855 aaKnown RBP4.09□□□□□ -1.75
YLR227W-BYLR227W-B IRC4Q03036 179 aa4.09□□□□□ -1.75
YLR227W-BYLR227W-B HIF1Q12373 385 aa4.09□□□□□ -1.75
YLR227W-BYLR227W-B SEC14P24280 304 aaKnown RBP4.09□□□□□ -1.75
YLR227W-BYLR227W-B YHL026CP38740 315 aa4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms