RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C ESL2P36168 1195 aa4.38□□□□□ -1.71
SPT23YKL020C INP52P50942 1183 aa4.38□□□□□ -1.71
SPT23YKL020C IST1P53843 298 aaPredicted RBP4.38□□□□□ -1.71
SPT23YKL020C SPO19Q03029 223 aa4.38□□□□□ -1.71
SPT23YKL020C MSH6Q03834 1242 aa4.38□□□□□ -1.71
SPT23YKL020C TAP42Q04372 366 aa4.38□□□□□ -1.71
SPT23YKL020C YKL068W-AQ3E826 78 aa4.38□□□□□ -1.71
SPT23YKL020C DOP1Q03921 1698 aa4.38□□□□□ -1.71
SPT23YKL020C UBP13P38187 747 aa4.38□□□□□ -1.71
SPT23YKL020C TOM71P38825 639 aaKnown RBP4.38□□□□□ -1.71
SPT23YKL020C MVP1P40959 511 aaKnown RBP4.38□□□□□ -1.71
SPT23YKL020C UBX2Q04228 584 aa4.38□□□□□ -1.71
SPT23YKL020C VPS20Q04272 221 aa4.38□□□□□ -1.71
SPT23YKL020C VTI1Q04338 217 aa4.38□□□□□ -1.71
SPT23YKL020C SSF2Q12153 453 aaPredicted RBP4.38□□□□□ -1.71
SPT23YKL020C RPO21P04050 1733 aaKnown RBP4.37□□□□□ -1.71
SPT23YKL020C YML133CQ03099 1374 aa4.37□□□□□ -1.71
SPT23YKL020C YLL067CQ07888 1374 aa4.37□□□□□ -1.71
SPT23YKL020C YLL066CQ99208 1374 aa4.37□□□□□ -1.71
SPT23YKL020C DLD1P32891 587 aa4.37□□□□□ -1.71
SPT23YKL020C RFC1P38630 861 aaKnown RBP4.37□□□□□ -1.71
SPT23YKL020C SAP1P39955 897 aaKnown RBP4.37□□□□□ -1.71
SPT23YKL020C POL32P47110 350 aa4.37□□□□□ -1.71
SPT23YKL020C YGL082WP53155 381 aa4.37□□□□□ -1.71
SPT23YKL020C YAF9P53930 226 aa4.37□□□□□ -1.71
SPT23YKL020C SPO71Q03868 1245 aa4.37□□□□□ -1.71
SPT23YKL020C SSQ1Q05931 657 aaPredicted RBP4.37□□□□□ -1.71
SPT23YKL020C PET494P07390 489 aaPredicted RBP4.37□□□□□ -1.71
SPT23YKL020C MAK16P10962 306 aaPredicted RBP4.37□□□□□ -1.71
SPT23YKL020C MER1P16523 270 aa4.37□□□□□ -1.71
SPT23YKL020C RPB4P20433 221 aaPredicted RBP4.37□□□□□ -1.71
SPT23YKL020C PEP12P32854 288 aa4.37□□□□□ -1.71
SPT23YKL020C YRB1P41920 201 aaKnown RBP4.37□□□□□ -1.71
SPT23YKL020C OCA1P50946 238 aaPredicted RBP4.37□□□□□ -1.71
SPT23YKL020C ARP5P53946 755 aa4.37□□□□□ -1.71
SPT23YKL020C SMD2Q06217 110 aaKnown RBP4.37□□□□□ -1.71
SPT23YKL020C YPL225WQ08971 146 aaKnown RBP4.37□□□□□ -1.71
SPT23YKL020C PSK1P31374 1356 aa4.37□□□□□ -1.71
SPT23YKL020C CDC25P04821 1589 aa4.37□□□□□ -1.71
SPT23YKL020C PAM1P37304 830 aaKnown RBP4.36□□□□□ -1.71
SPT23YKL020C TBS1P38114 1094 aa4.36□□□□□ -1.71
SPT23YKL020C ETP1P38748 585 aaKnown RBP4.36□□□□□ -1.71
SPT23YKL020C BUD27P43573 796 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SPT23YKL020C DSL1P53847 754 aa4.36□□□□□ -1.71
SPT23YKL020C SEC15P22224 910 aa4.36□□□□□ -1.71
SPT23YKL020C CDC3P32457 520 aaKnown RBP4.36□□□□□ -1.71
SPT23YKL020C NIP100P33420 868 aa4.36□□□□□ -1.71
SPT23YKL020C YEL1P34225 687 aa4.36□□□□□ -1.71
SPT23YKL020C PEX21P50091 288 aa4.36□□□□□ -1.71
SPT23YKL020C ARO80Q04052 950 aa4.36□□□□□ -1.71
SPT23YKL020C ERB1Q04660 807 aaKnown RBP4.36□□□□□ -1.71
SPT23YKL020C ARV1Q06541 321 aa4.36□□□□□ -1.71
SPT23YKL020C DNL4Q08387 944 aaPredicted RBP4.36□□□□□ -1.71
SPT23YKL020C NTE1Q04958 1679 aa4.36□□□□□ -1.71
SPT23YKL020C TFC3P34111 1160 aa4.36□□□□□ -1.71
SPT23YKL020C ATG19P35193 415 aa4.36□□□□□ -1.71
SPT23YKL020C ILV3P39522 585 aaKnown RBP4.36□□□□□ -1.71
SPT23YKL020C MET18P40469 1032 aa4.36□□□□□ -1.71
SPT23YKL020C ENP2P48234 707 aaKnown RBP4.36□□□□□ -1.71
SPT23YKL020C HST1P53685 503 aa4.36□□□□□ -1.71
SPT23YKL020C TIM50Q02776 476 aa4.36□□□□□ -1.71
SPT23YKL020C GYL1Q04322 720 aa4.36□□□□□ -1.71
SPT23YKL020C HSP104P31539 908 aaKnown RBP4.35□□□□□ -1.71
SPT23YKL020C MEF2P39677 819 aa4.35□□□□□ -1.71
SPT23YKL020C ARB1P40024 610 aaKnown RBP4.35□□□□□ -1.71
SPT23YKL020C YIL092WP40497 633 aa4.35□□□□□ -1.71
SPT23YKL020C NPA3P47122 385 aa4.35□□□□□ -1.71
SPT23YKL020C RTC4P53850 401 aa4.35□□□□□ -1.71
SPT23YKL020C SNZ1Q03148 297 aa4.35□□□□□ -1.71
SPT23YKL020C AOS1Q06624 347 aa4.35□□□□□ -1.71
SPT23YKL020C CIR2Q08822 631 aa4.35□□□□□ -1.71
SPT23YKL020C SWI1P09547 1314 aa4.35□□□□□ -1.71
SPT23YKL020C RRP5Q05022 1729 aaKnown RBP4.35□□□□□ -1.71
SPT23YKL020C MNR2P35724 969 aa4.35□□□□□ -1.71
SPT23YKL020C HYR1P40581 163 aaKnown RBP4.35□□□□□ -1.71
SPT23YKL020C TIM54P47045 478 aa4.35□□□□□ -1.71
SPT23YKL020C PRP31P49704 494 aaPredicted RBP4.35□□□□□ -1.71
SPT23YKL020C STE20Q03497 939 aaKnown RBP4.35□□□□□ -1.71
SPT23YKL020C INP2Q03824 705 aa4.35□□□□□ -1.71
SPT23YKL020C YRF1-4O13559 1382 aa4.35□□□□□ -1.71
SPT23YKL020C KEX1P09620 729 aa4.34□□□□□ -1.71
SPT23YKL020C STE11P23561 717 aa4.34□□□□□ -1.71
SPT23YKL020C SMY1P32364 656 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C CIC1P38779 376 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C SPC72P39723 622 aa4.34□□□□□ -1.71
SPT23YKL020C YER034WP40022 185 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C CKB1P43639 278 aa4.34□□□□□ -1.71
SPT23YKL020C RTF1P53064 558 aa4.34□□□□□ -1.71
SPT23YKL020C LSC1P53598 329 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C SLK19Q08581 821 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C MLP1Q02455 1875 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C RTG2P32608 588 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C MRE11P32829 692 aa4.34□□□□□ -1.71
SPT23YKL020C YME2P32843 850 aa4.34□□□□□ -1.71
SPT23YKL020C SAS3P34218 831 aa4.34□□□□□ -1.71
SPT23YKL020C PPX1P38698 397 aa4.34□□□□□ -1.71
SPT23YKL020C UTP18P40362 594 aaPredicted RBP4.34□□□□□ -1.71
SPT23YKL020C ALD4P46367 519 aaKnown RBP4.34□□□□□ -1.71
SPT23YKL020C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SPT23YKL020C FMP30Q02883 468 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms