RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C TTI1P36097 1038 aa3.47□□□□□ -1.85
RPN1YHR027C ECM4P36156 370 aa3.47□□□□□ -1.85
RPN1YHR027C YSW1P38280 609 aa3.47□□□□□ -1.85
RPN1YHR027C IES2P40154 320 aa3.47□□□□□ -1.85
RPN1YHR027C TPO2P53283 614 aa3.47□□□□□ -1.85
RPN1YHR027C RCM1P53972 490 aa3.47□□□□□ -1.85
RPN1YHR027C OMS1Q06668 471 aa3.47□□□□□ -1.85
RPN1YHR027C YOR223WQ12015 292 aa3.47□□□□□ -1.85
RPN1YHR027C IOC2Q12072 812 aa3.47□□□□□ -1.85
RPN1YHR027C TY1B-BRQ12193 1756 aa3.47□□□□□ -1.85
RPN1YHR027C TY1B-GR3Q12316 1755 aa3.47□□□□□ -1.85
RPN1YHR027C TY1B-ORQ92393 1755 aa3.47□□□□□ -1.85
RPN1YHR027C RPA190P10964 1664 aaKnown RBP3.47□□□□□ -1.85
RPN1YHR027C PET122P10355 254 aa3.47□□□□□ -1.85
RPN1YHR027C SEC23P15303 768 aaKnown RBP3.47□□□□□ -1.85
RPN1YHR027C TUP1P16649 713 aa3.47□□□□□ -1.85
RPN1YHR027C MBR1P23493 339 aa3.47□□□□□ -1.85
RPN1YHR027C KCC4P25389 1037 aa3.47□□□□□ -1.85
RPN1YHR027C OSH3P38713 996 aaKnown RBP3.47□□□□□ -1.85
RPN1YHR027C YLF2P38746 405 aa3.47□□□□□ -1.85
RPN1YHR027C SPT8P38915 602 aa3.47□□□□□ -1.85
RPN1YHR027C VPS8P39702 1274 aa3.47□□□□□ -1.85
RPN1YHR027C VPS53P47061 822 aa3.47□□□□□ -1.85
RPN1YHR027C RRP46P53256 223 aaPredicted RBP3.47□□□□□ -1.85
RPN1YHR027C HEF3P53978 1044 aaKnown RBP3.47□□□□□ -1.85
RPN1YHR027C VTC3Q02725 835 aa3.47□□□□□ -1.85
RPN1YHR027C SYH1Q02875 849 aaKnown RBP3.47□□□□□ -1.85
RPN1YHR027C FAR8Q05040 523 aa3.47□□□□□ -1.85
RPN1YHR027C VAM6Q07468 1049 aa3.47□□□□□ -1.85
RPN1YHR027C ADE6P38972 1358 aaKnown RBP3.47□□□□□ -1.85
RPN1YHR027C BNR1P40450 1375 aa3.47□□□□□ -1.85
RPN1YHR027C SPE2P21182 396 aa3.46□□□□□ -1.86
RPN1YHR027C CLB4P24871 460 aa3.46□□□□□ -1.86
RPN1YHR027C HSM3P38348 480 aa3.46□□□□□ -1.86
RPN1YHR027C DMA1P38823 416 aa3.46□□□□□ -1.86
RPN1YHR027C FAP1P53971 965 aa3.46□□□□□ -1.86
RPN1YHR027C MFM1Q02783 413 aa3.46□□□□□ -1.86
RPN1YHR027C MCM16Q12262 181 aa3.46□□□□□ -1.86
RPN1YHR027C TY4A-HQ6Q5P6 413 aa3.46□□□□□ -1.86
RPN1YHR027C USO1P25386 1790 aa3.46□□□□□ -1.86
RPN1YHR027C LTE1P07866 1435 aa3.46□□□□□ -1.86
RPN1YHR027C NAT1P12945 854 aaKnown RBP3.46□□□□□ -1.86
RPN1YHR027C PRE10P21242 288 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
RPN1YHR027C RPN2P32565 945 aaKnown RBP3.46□□□□□ -1.86
RPN1YHR027C PTH2P34222 208 aa3.46□□□□□ -1.86
RPN1YHR027C NUP60P39705 539 aa3.46□□□□□ -1.86
RPN1YHR027C HXT13P39924 564 aa3.46□□□□□ -1.86
RPN1YHR027C SHE10P53075 577 aa3.46□□□□□ -1.86
RPN1YHR027C BNI4P53858 892 aa3.46□□□□□ -1.86
RPN1YHR027C PKH1Q03407 766 aa3.46□□□□□ -1.86
RPN1YHR027C YKU80Q04437 629 aa3.46□□□□□ -1.86
RPN1YHR027C MMR1Q06324 491 aa3.46□□□□□ -1.86
RPN1YHR027C SDH5Q08230 162 aa3.46□□□□□ -1.86
RPN1YHR027C BRR1Q99177 341 aaPredicted RBP3.46□□□□□ -1.86
RPN1YHR027C TY1B-JR2P47100 1755 aaKnown RBP3.46□□□□□ -1.86
RPN1YHR027C TY1B-ER2Q03619 1755 aa3.46□□□□□ -1.86
RPN1YHR027C TY1B-MR1Q04214 1755 aa3.46□□□□□ -1.86
RPN1YHR027C TY1B-MR2Q04670 1755 aaKnown RBP3.46□□□□□ -1.86
RPN1YHR027C TY1B-LR1Q12088 1755 aaKnown RBP3.46□□□□□ -1.86
RPN1YHR027C TY1B-NL1Q12112 1755 aa3.46□□□□□ -1.86
RPN1YHR027C TY1B-GR1Q12141 1755 aa3.46□□□□□ -1.86
RPN1YHR027C TY1B-BLQ12490 1755 aa3.46□□□□□ -1.86
RPN1YHR027C NUP192P47054 1683 aa3.45□□□□□ -1.86
RPN1YHR027C PRT1P06103 763 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C ADE3P07245 946 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C IME1P21190 360 aa3.45□□□□□ -1.86
RPN1YHR027C SWC3P31376 625 aa3.45□□□□□ -1.86
RPN1YHR027C YKR018CP36114 725 aa3.45□□□□□ -1.86
RPN1YHR027C TBS1P38114 1094 aa3.45□□□□□ -1.86
RPN1YHR027C PIH1P38768 344 aa3.45□□□□□ -1.86
RPN1YHR027C LIN1P38852 340 aaPredicted RBP3.45□□□□□ -1.86
RPN1YHR027C SDS3P40505 327 aa3.45□□□□□ -1.86
RPN1YHR027C MAD1P40957 749 aa3.45□□□□□ -1.86
RPN1YHR027C STB1P42845 420 aa3.45□□□□□ -1.86
RPN1YHR027C GCN20P43535 752 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C MRX12P47084 519 aa3.45□□□□□ -1.86
RPN1YHR027C ILM1P47155 203 aa3.45□□□□□ -1.86
RPN1YHR027C ESBP6P53918 673 aa3.45□□□□□ -1.86
RPN1YHR027C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86 RIP-Chip
RPN1YHR027C RSM28Q03430 361 aa3.45□□□□□ -1.86
RPN1YHR027C ITT1Q04638 464 aa3.45□□□□□ -1.86
RPN1YHR027C YLR177WQ06251 628 aa3.45□□□□□ -1.86
RPN1YHR027C SPN1Q06505 410 aaPredicted RBP3.45□□□□□ -1.86
RPN1YHR027C TSR1Q07381 788 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C BUD7Q08754 746 aa3.45□□□□□ -1.86
RPN1YHR027C VTH1P40438 1549 aa3.45□□□□□ -1.86
RPN1YHR027C ADH4P10127 382 aa3.45□□□□□ -1.86
RPN1YHR027C FRS2P15625 503 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C HIR2P32480 875 aa3.45□□□□□ -1.86
RPN1YHR027C ECM32P32644 1121 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C CDC27P38042 758 aa3.45□□□□□ -1.86
RPN1YHR027C RTG3P38165 486 aa3.45□□□□□ -1.86
RPN1YHR027C SYG1P40528 902 aa3.45□□□□□ -1.86
RPN1YHR027C SEC27P41811 889 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C MSN5P52918 1224 aa3.45□□□□□ -1.86
RPN1YHR027C YGL242CP53066 181 aa3.45□□□□□ -1.86
RPN1YHR027C BTN2P53286 410 aa3.45□□□□□ -1.86
RPN1YHR027C BET4Q00618 327 aa3.45□□□□□ -1.86
RPN1YHR027C CEF1Q03654 590 aaPredicted RBP3.45□□□□□ -1.86
RPN1YHR027C NKP2Q06162 153 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms