RNA–Protein interactions for RNA: YGL140C

YGL140C, Transcript of Putative protein of unknown function, yeast

Gene YGL140C, Length 3,660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL140C	YGL140C	MCM16	Q12262	181 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	OPI1	P21957	404 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	PWP2	P25635	923 aa	Known RBP	4.14	□□□□□ -1.75
YGL140C	YGL140C	CPS1	P27614	576 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	PSO2	P30620	661 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	AIM20	P40451	204 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	HUL5	P53119	910 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	RBA50	Q04418	439 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	NSE3	Q05541	303 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	HEL2	Q05580	639 aa	Known RBP	4.14	□□□□□ -1.75
YGL140C	YGL140C	CLF1	Q12309	687 aa	Predicted RBP	4.14	□□□□□ -1.75
YGL140C	YGL140C	ERP4	Q12450	207 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	PDI1	P17967	522 aa	Known RBP	4.14	□□□□□ -1.75
YGL140C	YGL140C	BUD2	P33314	1104 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	REI1	P38344	393 aa	Predicted RBP	4.14	□□□□□ -1.75
YGL140C	YGL140C	BIM1	P40013	344 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	BET4	Q00618	327 aa		4.14	□□□□□ -1.75
YGL140C	YGL140C	RTC1	Q08281	1341 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	PRP16	P15938	1071 aa	Predicted RBP	4.13	□□□□□ -1.75
YGL140C	YGL140C	ELM1	P32801	640 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	TOM71	P38825	639 aa	Known RBP	4.13	□□□□□ -1.75
YGL140C	YGL140C	MEP1	P40260	492 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	CCT5	P40413	562 aa	Known RBP	4.13	□□□□□ -1.75
YGL140C	YGL140C	IAH1	P41734	238 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	YGL242C	P53066	181 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	LCB5	Q06147	687 aa	Known RBP	4.13	□□□□□ -1.75
YGL140C	YGL140C	IRC3	Q06683	689 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	KRS1	P15180	591 aa	Known RBP	4.13	□□□□□ -1.75
YGL140C	YGL140C	KAR3	P17119	729 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
YGL140C	YGL140C	RAD16	P31244	790 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	NDC80	P40460	691 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	YNL058C	P53947	316 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	CTF4	Q01454	927 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	WAR1	Q03631	944 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	PDR18	P53756	1333 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	CDC15	P27636	974 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	HEM3	P28789	327 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	MIF2	P35201	549 aa		4.13	□□□□□ -1.75
YGL140C	YGL140C	IML1	P47170	1584 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	CMP2	P14747	604 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	ESL2	P36168	1195 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	TFG1	P41895	735 aa	Predicted RBP	4.12	□□□□□ -1.75
YGL140C	YGL140C	STR2	P47164	639 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	RMD1	Q03441	430 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	ENT2	Q05785	613 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	HIM1	Q06674	414 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	TSR3	Q12094	313 aa	Known RBP	4.12	□□□□□ -1.75
YGL140C	YGL140C	YVC1	Q12324	675 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	RNR2	P09938	399 aa	Known RBP	4.12	□□□□□ -1.75
YGL140C	YGL140C	ARG1	P22768	420 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	RAM2	P29703	316 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	NUP42	P49686	430 aa	Known RBP	4.12	□□□□□ -1.75
YGL140C	YGL140C	ALG12	P53730	551 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	DPL1	Q05567	589 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	HAT1	Q12341	374 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	LYS2	P07702	1392 aa		4.12	□□□□□ -1.75
YGL140C	YGL140C	GPA1	P08539	472 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	YBR287W	P38355	427 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	YER130C	P39959	443 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	RIO2	P40160	425 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	YRB1	P41920	201 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	VID30	P53076	958 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	YNR021W	P53723	404 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	RCM1	P53972	490 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	RAV1	P47104	1357 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	KEX2	P13134	814 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	PTC4	P38089	393 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	HYR1	P40581	163 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	RIA1	P53893	1110 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	KRE28	Q04431	385 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	RUD3	Q12234	484 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	YML133C	Q03099	1374 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	YLL067C	Q07888	1374 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	YLL066C	Q99208	1374 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	VAS1	P07806	1104 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	TRX2	P22803	104 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	RME1	P32338	300 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	GCD6	P32501	712 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	SRP40	P32583	406 aa	Predicted RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	RTG2	P32608	588 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	YKR018C	P36114	725 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	NOC2	P39744	710 aa	Known RBP	4.11	□□□□□ -1.75
YGL140C	YGL140C	OMS1	Q06668	471 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	WHI5	Q12416	295 aa		4.11	□□□□□ -1.75
YGL140C	YGL140C	SSB1	P11484	613 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	PDB1	P32473	366 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	PRX1	P34227	261 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	SET1	P38827	1080 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	BEM4	P39011	633 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	PEA2	P40091	420 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	SSB2	P40150	613 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	JIP5	Q06214	492 aa	Predicted RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	TMA16	Q08687	178 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	CFT2	Q12102	859 aa	Predicted RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	NKP1	Q12493	238 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	RPA190	P10964	1664 aa	Known RBP	4.1	□□□□□ -1.75
YGL140C	YGL140C	JIP3	O13555	125 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	PET111	P08468	800 aa		4.1	□□□□□ -1.75
YGL140C	YGL140C	RDS1	P25611	832 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms