RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W VPS64Q03944 604 aa6.4□□□□□ -1.38
RPN12YFR052W BMS1Q08965 1183 aaKnown RBP6.4□□□□□ -1.38
RPN12YFR052W PHM7Q12252 991 aa6.4□□□□□ -1.38
RPN12YFR052W LYS2P07702 1392 aa6.4□□□□□ -1.39
RPN12YFR052W KIP2P28743 706 aa6.39□□□□□ -1.39
RPN12YFR052W IXR1P33417 597 aa6.39□□□□□ -1.39
RPN12YFR052W NUP85P46673 744 aa6.39□□□□□ -1.39
RPN12YFR052W CWH41P53008 833 aa6.39□□□□□ -1.39
RPN12YFR052W HEF3P53978 1044 aaKnown RBP6.39□□□□□ -1.39
RPN12YFR052W SSP2Q08646 371 aa6.39□□□□□ -1.39
RPN12YFR052W LPD1P09624 499 aaKnown RBP6.38□□□□□ -1.39
RPN12YFR052W MDG1P53885 366 aa6.38□□□□□ -1.39
RPN12YFR052W KIN4Q01919 800 aa6.38□□□□□ -1.39
RPN12YFR052W IOC4Q04213 475 aa6.38□□□□□ -1.39
RPN12YFR052W CAF20P12962 161 aaKnown RBP6.37□□□□□ -1.39
RPN12YFR052W MAM1P40065 302 aa6.37□□□□□ -1.39
RPN12YFR052W YER156CP40093 338 aaKnown RBP6.37□□□□□ -1.39
RPN12YFR052W TBF1Q02457 562 aa6.37□□□□□ -1.39
RPN12YFR052W YLR346CQ06139 101 aa6.37□□□□□ -1.39
RPN12YFR052W YPR204WQ08995 1032 aa6.37□□□□□ -1.39
RPN12YFR052W CTT1P06115 562 aa6.36□□□□□ -1.39
RPN12YFR052W SUI2P20459 304 aaKnown RBP6.36□□□□□ -1.39
RPN12YFR052W SMY1P32364 656 aaKnown RBP6.36□□□□□ -1.39
RPN12YFR052W ERT1P38140 529 aa6.36□□□□□ -1.39
RPN12YFR052W GYP7P48365 746 aa6.36□□□□□ -1.39
RPN12YFR052W YNR021WP53723 404 aaKnown RBP6.36□□□□□ -1.39
RPN12YFR052W YKL222CP35995 705 aa6.35□□□□□ -1.39
RPN12YFR052W YIR007WP40566 764 aa6.35□□□□□ -1.39
RPN12YFR052W RAT1Q02792 1006 aaKnown RBP6.35□□□□□ -1.39
RPN12YFR052W SRT1Q03175 343 aa6.35□□□□□ -1.39
RPN12YFR052W TY1A-BLQ12266 440 aa6.35□□□□□ -1.39
RPN12YFR052W SRF1Q12516 437 aa6.35□□□□□ -1.39
RPN12YFR052W PFF1P38244 976 aa6.34□□□□□ -1.39
RPN12YFR052W YGR122WP53272 402 aa6.34□□□□□ -1.39
RPN12YFR052W FCP1Q03254 732 aa6.34□□□□□ -1.39
RPN12YFR052W BDF2Q07442 638 aa6.34□□□□□ -1.39
RPN12YFR052W YOL057WQ08225 711 aa6.34□□□□□ -1.39
RPN12YFR052W MMP1Q12372 583 aa6.34□□□□□ -1.39
RPN12YFR052W GSC2P40989 1895 aa6.34□□□□□ -1.39
RPN12YFR052W SWI1P09547 1314 aa6.33□□□□□ -1.4
RPN12YFR052W VAC17P25591 423 aa6.33□□□□□ -1.4
RPN12YFR052W TRK2P28584 889 aa6.33□□□□□ -1.4
RPN12YFR052W SQS1P53866 767 aaKnown RBP6.33□□□□□ -1.4
RPN12YFR052W TOP1P04786 769 aa6.32□□□□□ -1.4
RPN12YFR052W IRC3Q06683 689 aa6.32□□□□□ -1.4
RPN12YFR052W TYW1Q08960 810 aaKnown RBP6.32□□□□□ -1.4
RPN12YFR052W FIG2P25653 1609 aa6.32□□□□□ -1.4
RPN12YFR052W MRP7P12687 371 aa6.31□□□□□ -1.4
RPN12YFR052W MIP1P15801 1254 aa6.31□□□□□ -1.4
RPN12YFR052W ICL1P28240 557 aaPredicted RBP6.31□□□□□ -1.4
RPN12YFR052W NUP133P36161 1157 aa6.31□□□□□ -1.4
RPN12YFR052W SCW11P53189 542 aa6.31□□□□□ -1.4
RPN12YFR052W YGR035CP53222 116 aa6.31□□□□□ -1.4
RPN12YFR052W ERO1Q03103 563 aa6.31□□□□□ -1.4
RPN12YFR052W PKH1Q03407 766 aa6.31□□□□□ -1.4
RPN12YFR052W YDR306CQ06640 478 aa6.31□□□□□ -1.4
RPN12YFR052W ESS1P22696 170 aa6.3□□□□□ -1.4
RPN12YFR052W FRD1P32614 470 aaKnown RBP6.3□□□□□ -1.4
RPN12YFR052W RPN1P38764 993 aaKnown RBP6.3□□□□□ -1.4
RPN12YFR052W RSC30P38781 883 aa6.3□□□□□ -1.4
RPN12YFR052W VPS27P40343 622 aaKnown RBP6.3□□□□□ -1.4
RPN12YFR052W AAD14P42884 376 aa6.3□□□□□ -1.4
RPN12YFR052W DNM1P54861 757 aa6.3□□□□□ -1.4
RPN12YFR052W UBP16Q02863 499 aa6.3□□□□□ -1.4
RPN12YFR052W MTC5Q03897 1148 aa6.3□□□□□ -1.4
RPN12YFR052W HPF1Q05164 967 aa6.3□□□□□ -1.4
RPN12YFR052W HAT1Q12341 374 aa6.3□□□□□ -1.4
RPN12YFR052W RPP0P05317 312 aaKnown RBP6.29□□□□□ -1.4
RPN12YFR052W YJU3P28321 313 aa6.29□□□□□ -1.4
RPN12YFR052W SWC3P31376 625 aa6.29□□□□□ -1.4
RPN12YFR052W RAD24P32641 659 aa6.29□□□□□ -1.4
RPN12YFR052W DIB1Q06819 143 aaPredicted RBP6.29□□□□□ -1.4
RPN12YFR052W RVB2Q12464 471 aaKnown RBP6.29□□□□□ -1.4
RPN12YFR052W SSK22P25390 1331 aaPredicted RBP6.28□□□□□ -1.4
RPN12YFR052W AIM7Q12156 149 aa6.28□□□□□ -1.4
RPN12YFR052W ARG82P07250 355 aa6.27□□□□□ -1.41
RPN12YFR052W FUN12P39730 1002 aaKnown RBP6.27□□□□□ -1.41
RPN12YFR052W SYF1Q04048 859 aaPredicted RBP6.27□□□□□ -1.41
RPN12YFR052W CDC45Q08032 650 aa6.27□□□□□ -1.41
RPN12YFR052W GLC3P32775 704 aa6.26□□□□□ -1.41
RPN12YFR052W EMW1P42842 904 aaKnown RBP6.26□□□□□ -1.41
RPN12YFR052W YJR008WP47085 338 aa6.26□□□□□ -1.41
RPN12YFR052W LSC2P53312 427 aa6.26□□□□□ -1.41
RPN12YFR052W CSI1Q04368 295 aa6.26□□□□□ -1.41
RPN12YFR052W PSH1Q12161 406 aa6.26□□□□□ -1.41
RPN12YFR052W DAL5P15365 543 aa6.25□□□□□ -1.41
RPN12YFR052W RET1P22276 1149 aaKnown RBP6.25□□□□□ -1.41
RPN12YFR052W YKU70P32807 602 aa6.25□□□□□ -1.41
RPN12YFR052W YJR098CP47139 656 aa6.25□□□□□ -1.41
RPN12YFR052W ITC1P53125 1264 aa6.25□□□□□ -1.41
RPN12YFR052W ATF2P53296 535 aa6.25□□□□□ -1.41
RPN12YFR052W ATG20Q07528 640 aa6.25□□□□□ -1.41
RPN12YFR052W NOP8Q08287 484 aaPredicted RBP6.25□□□□□ -1.41
RPN12YFR052W KTR1P27810 393 aaKnown RBP6.24□□□□□ -1.41
RPN12YFR052W PRS1P32895 427 aaKnown RBP6.24□□□□□ -1.41
RPN12YFR052W LEO1P38439 464 aa6.24□□□□□ -1.41
RPN12YFR052W YPP1P46951 817 aa6.24□□□□□ -1.41
RPN12YFR052W GRX6Q12438 231 aa6.24□□□□□ -1.41
RPN12YFR052W THS1P04801 734 aaKnown RBP6.23□□□□□ -1.41
RPN12YFR052W SLA1P32790 1244 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms