RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C ESC2Q06340 456 aa7.85□□□□□ -1.15
SHO1YER118C ALR1Q08269 859 aa7.85□□□□□ -1.15
SHO1YER118C HSP60P19882 572 aaKnown RBP7.84□□□□□ -1.15
SHO1YER118C YBR184WP38299 523 aa7.84□□□□□ -1.15
SHO1YER118C PMT3P47190 753 aa7.84□□□□□ -1.15
SHO1YER118C HLJ1P48353 224 aa7.84□□□□□ -1.15
SHO1YER118C RSC4Q02206 625 aa7.84□□□□□ -1.15
SHO1YER118C TFB2Q02939 513 aa7.84□□□□□ -1.15
SHO1YER118C DPL1Q05567 589 aa7.84□□□□□ -1.15
SHO1YER118C BSC2Q05611 235 aa7.84□□□□□ -1.15
SHO1YER118C REC8Q12188 680 aa7.84□□□□□ -1.15
SHO1YER118C SRF1Q12516 437 aa7.84□□□□□ -1.15
SHO1YER118C BAS1P22035 811 aa7.83□□□□□ -1.16
SHO1YER118C RPL8BP29453 256 aaKnown RBP7.83□□□□□ -1.16
SHO1YER118C STE5P32917 917 aa7.83□□□□□ -1.16
SHO1YER118C YEL023CP39992 682 aa7.83□□□□□ -1.16
SHO1YER118C HOS4P40480 1083 aa7.83□□□□□ -1.16
SHO1YER118C PGI1P12709 554 aaKnown RBP7.82□□□□□ -1.16
SHO1YER118C SET4P42948 560 aa7.82□□□□□ -1.16
SHO1YER118C UBX4P54730 416 aa7.82□□□□□ -1.16
SHO1YER118C MDM1Q01846 1127 aa7.82□□□□□ -1.16
SHO1YER118C NUP145P49687 1317 aa7.81□□□□□ -1.16
SHO1YER118C SMC1P32908 1225 aa7.81□□□□□ -1.16
SHO1YER118C YKL222CP35995 705 aa7.81□□□□□ -1.16
SHO1YER118C GPP1P41277 250 aaKnown RBP7.81□□□□□ -1.16
SHO1YER118C ALO1P54783 526 aaKnown RBP7.81□□□□□ -1.16
SHO1YER118C TGL2P54857 326 aa7.81□□□□□ -1.16
SHO1YER118C UGO1Q03327 502 aa7.81□□□□□ -1.16
SHO1YER118C MSB4Q12317 492 aa7.81□□□□□ -1.16
SHO1YER118C RRI2Q12348 645 aa7.81□□□□□ -1.16
SHO1YER118C SWI5P08153 709 aa7.8□□□□□ -1.16
SHO1YER118C MPH2P0CD99 609 aa7.8□□□□□ -1.16
SHO1YER118C PRP40P33203 583 aaKnown RBP7.8□□□□□ -1.16
SHO1YER118C MAL31P38156 614 aa7.8□□□□□ -1.16
SHO1YER118C PEA2P40091 420 aa7.8□□□□□ -1.16
SHO1YER118C COG6P53959 839 aa7.8□□□□□ -1.16
SHO1YER118C FMP25Q08023 583 aa7.8□□□□□ -1.16
SHO1YER118C RTT10Q08924 1013 aa7.8□□□□□ -1.16
SHO1YER118C SNU66Q12420 587 aaPredicted RBP7.8□□□□□ -1.16
SHO1YER118C PDC1P06169 563 aaKnown RBP7.79□□□□□ -1.16
SHO1YER118C NPL4P33755 580 aa7.79□□□□□ -1.16
SHO1YER118C YPL109CQ02981 657 aa7.79□□□□□ -1.16
SHO1YER118C INP54Q08227 384 aaKnown RBP7.79□□□□□ -1.16
SHO1YER118C ISU2Q12056 156 aa7.79□□□□□ -1.16
SHO1YER118C SST2P11972 698 aaKnown RBP7.78□□□□□ -1.16
SHO1YER118C MRPL33P20084 86 aa7.78□□□□□ -1.16
SHO1YER118C TIF11P38912 153 aaKnown RBP7.78□□□□□ -1.16
SHO1YER118C RTA1P53047 317 aa7.78□□□□□ -1.16
SHO1YER118C ERP6P53198 216 aa7.78□□□□□ -1.16
SHO1YER118C EEB1Q02891 456 aa7.78□□□□□ -1.16
SHO1YER118C YCS4Q06156 1176 aa7.78□□□□□ -1.16
SHO1YER118C TRP5P00931 707 aaKnown RBP7.77□□□□□ -1.17
SHO1YER118C GCR1P07261 785 aa7.77□□□□□ -1.17
SHO1YER118C OPI1P21957 404 aa7.77□□□□□ -1.17
SHO1YER118C RAM1P22007 431 aa7.77□□□□□ -1.17
SHO1YER118C VAC17P25591 423 aa7.77□□□□□ -1.17
SHO1YER118C PEX6P33760 1030 aa7.77□□□□□ -1.17
SHO1YER118C TRZ1P36159 838 aaPredicted RBP7.77□□□□□ -1.17
SHO1YER118C YBR071WP38243 211 aa7.77□□□□□ -1.17
SHO1YER118C YAP1801P38856 637 aa7.77□□□□□ -1.17
SHO1YER118C SPC105P53148 917 aa7.77□□□□□ -1.17
SHO1YER118C UME1Q03010 460 aa7.77□□□□□ -1.17
SHO1YER118C SPP1Q03012 353 aa7.77□□□□□ -1.17
SHO1YER118C ATG20Q07528 640 aa7.77□□□□□ -1.17
SHO1YER118C THI73Q07904 523 aa7.77□□□□□ -1.17
SHO1YER118C MPC54Q08550 464 aa7.77□□□□□ -1.17
SHO1YER118C MPD2Q99316 277 aa7.77□□□□□ -1.17
SHO1YER118C HSC82P15108 705 aaKnown RBP7.76□□□□□ -1.17
SHO1YER118C KAR2P16474 682 aaKnown RBP7.76□□□□□ -1.17
SHO1YER118C NPR1P22211 790 aa7.76□□□□□ -1.17
SHO1YER118C MCM5P29496 775 aaKnown RBP7.76□□□□□ -1.17
SHO1YER118C MRS6P32864 603 aaKnown RBP7.76□□□□□ -1.17
SHO1YER118C MRP8P35719 219 aa7.76□□□□□ -1.17
SHO1YER118C HXT5P38695 592 aa7.76□□□□□ -1.17
SHO1YER118C GEM1P39722 662 aa7.76□□□□□ -1.17
SHO1YER118C IRR1P40541 1150 aa7.76□□□□□ -1.17
SHO1YER118C HUL4P40985 892 aa7.76□□□□□ -1.17
SHO1YER118C GPG1P53130 126 aa7.76□□□□□ -1.17
SHO1YER118C TAF8Q03750 510 aa7.76□□□□□ -1.17
SHO1YER118C TMA46Q12000 345 aaKnown RBP7.76□□□□□ -1.17
SHO1YER118C AGP1P25376 633 aa7.75□□□□□ -1.17
SHO1YER118C ARE1P25628 610 aa7.75□□□□□ -1.17
SHO1YER118C SSH4P32343 579 aa7.75□□□□□ -1.17
SHO1YER118C PIC2P40035 300 aa7.75□□□□□ -1.17
SHO1YER118C HXT8P40886 569 aa7.75□□□□□ -1.17
SHO1YER118C EMW1P42842 904 aaKnown RBP7.75□□□□□ -1.17
SHO1YER118C PFD1P46988 109 aa7.75□□□□□ -1.17
SHO1YER118C PEX14P53112 341 aa7.75□□□□□ -1.17
SHO1YER118C YNL193WP53870 558 aa7.75□□□□□ -1.17
SHO1YER118C YNL034WP53963 612 aa7.75□□□□□ -1.17
SHO1YER118C YNL018CP53976 612 aa7.75□□□□□ -1.17
SHO1YER118C SHE9Q04172 456 aa7.75□□□□□ -1.17
SHO1YER118C EAF1Q06337 982 aa7.75□□□□□ -1.17
SHO1YER118C EUG1P32474 517 aa7.74□□□□□ -1.17
SHO1YER118C JNM1P36224 373 aa7.74□□□□□ -1.17
SHO1YER118C PTC4P38089 393 aa7.74□□□□□ -1.17
SHO1YER118C MPP10P47083 593 aaKnown RBP7.74□□□□□ -1.17
SHO1YER118C HSV2P50079 448 aaPredicted RBP7.74□□□□□ -1.17
SHO1YER118C PIP2P52960 996 aa7.74□□□□□ -1.17
SHO1YER118C MEH1Q02205 184 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms