RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B MSH4P40965 878 aaPredicted RBP16.84■□□□□ 0.29
YER088W-BYER088W-B TIF6Q12522 245 aaKnown RBP16.84■□□□□ 0.29
YER088W-BYER088W-B ENP2P48234 707 aaKnown RBP16.83■□□□□ 0.28
YER088W-BYER088W-B PEX29Q03370 554 aa16.83■□□□□ 0.28
YER088W-BYER088W-B PPM2Q08282 695 aa16.83■□□□□ 0.28
YER088W-BYER088W-B GIN4Q12263 1142 aa16.83■□□□□ 0.28
YER088W-BYER088W-B LAM4P38800 1345 aa16.82■□□□□ 0.28
YER088W-BYER088W-B KIN1P13185 1064 aa16.82■□□□□ 0.28
YER088W-BYER088W-B CST9Q06032 482 aa16.82■□□□□ 0.28
YER088W-BYER088W-B TAH18Q12181 623 aa16.82■□□□□ 0.28
YER088W-BYER088W-B YPL260WQ08977 551 aa16.81■□□□□ 0.28
YER088W-BYER088W-B STM1P39015 273 aaKnown RBP16.8■□□□□ 0.28
YER088W-BYER088W-B YDL124WQ07551 312 aaKnown RBP16.8■□□□□ 0.28
YER088W-BYER088W-B RAD50P12753 1312 aa16.79■□□□□ 0.28
YER088W-BYER088W-B TUB2P02557 457 aaKnown RBP16.79■□□□□ 0.28
YER088W-BYER088W-B OPI1P21957 404 aa16.79■□□□□ 0.28
YER088W-BYER088W-B RIM20Q12033 661 aa16.79■□□□□ 0.28
YER088W-BYER088W-B COQ1P18900 473 aa16.78■□□□□ 0.28
YER088W-BYER088W-B SPT21P35209 758 aa16.78■□□□□ 0.28
YER088W-BYER088W-B APE3P37302 537 aaKnown RBP16.78■□□□□ 0.28
YER088W-BYER088W-B RBA50Q04418 439 aa16.77■□□□□ 0.28
YER088W-BYER088W-B VAS1P07806 1104 aaKnown RBP16.76■□□□□ 0.27
YER088W-BYER088W-B ACA1P39970 489 aa16.76■□□□□ 0.27
YER088W-BYER088W-B SNU71P53207 620 aaKnown RBP16.76■□□□□ 0.27
YER088W-BYER088W-B SRF1Q12516 437 aa16.76■□□□□ 0.27
YER088W-BYER088W-B MOT2P34909 587 aaKnown RBP16.75■□□□□ 0.27
YER088W-BYER088W-B YHL050CP38721 697 aa16.75■□□□□ 0.27
YER088W-BYER088W-B RTS1P38903 757 aa16.75■□□□□ 0.27
YER088W-BYER088W-B MPH3P0CE00 602 aa16.74■□□□□ 0.27
YER088W-BYER088W-B MET1P36150 593 aa16.74■□□□□ 0.27
YER088W-BYER088W-B CST26P38226 397 aa16.74■□□□□ 0.27
YER088W-BYER088W-B SLN1P39928 1220 aaPredicted RBP16.74■□□□□ 0.27
YER088W-BYER088W-B CHO2P05374 869 aaKnown RBP16.73■□□□□ 0.27
YER088W-BYER088W-B PRE8P23639 250 aa16.73■□□□□ 0.27
YER088W-BYER088W-B RSC30P38781 883 aa16.73■□□□□ 0.27
YER088W-BYER088W-B AAP1P37898 856 aaKnown RBP16.72■□□□□ 0.27
YER088W-BYER088W-B RRP8P38961 392 aaKnown RBP16.72■□□□□ 0.27
YER088W-BYER088W-B JIP4Q03361 876 aa16.72■□□□□ 0.27
YER088W-BYER088W-B MRD1Q06106 887 aaKnown RBP16.72■□□□□ 0.27
YER088W-BYER088W-B SRM1P21827 482 aa16.71■□□□□ 0.27
YER088W-BYER088W-B VID27P40157 782 aa16.71■□□□□ 0.27
YER088W-BYER088W-B FPR4Q06205 392 aaPredicted RBP16.71■□□□□ 0.27
YER088W-BYER088W-B LAP2Q10740 671 aa16.71■□□□□ 0.27
YER088W-BYER088W-B ASH1P34233 588 aa16.7■□□□□ 0.26
YER088W-BYER088W-B RAD61Q99359 647 aa16.7■□□□□ 0.26
YER088W-BYER088W-B OCT1P35999 772 aa16.69■□□□□ 0.26
YER088W-BYER088W-B RPS15Q01855 142 aaKnown RBP16.68■□□□□ 0.26
YER088W-BYER088W-B YDJ1P25491 409 aaKnown RBP16.67■□□□□ 0.26
YER088W-BYER088W-B BRN1P38170 754 aa16.67■□□□□ 0.26
YER088W-BYER088W-B SKG3Q06315 1026 aa16.67■□□□□ 0.26
YER088W-BYER088W-B FBP1P09201 348 aa16.66■□□□□ 0.26
YER088W-BYER088W-B KRS1P15180 591 aaKnown RBP16.66■□□□□ 0.26
YER088W-BYER088W-B TIF4631P39935 952 aaKnown RBP16.66■□□□□ 0.26
YER088W-BYER088W-B UFD2P54860 961 aa16.66■□□□□ 0.26
YER088W-BYER088W-B LYS14P40971 790 aa16.65■□□□□ 0.26
YER088W-BYER088W-B NET1P47035 1189 aa16.65■□□□□ 0.26
YER088W-BYER088W-B SSF2Q12153 453 aaPredicted RBP16.65■□□□□ 0.26
YER088W-BYER088W-B NCS6P53088 359 aa16.64■□□□□ 0.25
YER088W-BYER088W-B SUB2Q07478 446 aaKnown RBP16.64■□□□□ 0.25
YER088W-BYER088W-B ERG12P07277 443 aa16.63■□□□□ 0.25
YER088W-BYER088W-B SKI2P35207 1287 aaKnown RBP RIP-Chip data16.63■□□□□ 0.25not detected
YER088W-BYER088W-B SPR3P41901 512 aa16.63■□□□□ 0.25
YER088W-BYER088W-B CHS3P29465 1165 aa16.62■□□□□ 0.25
YER088W-BYER088W-B PRO3P32263 286 aaKnown RBP16.62■□□□□ 0.25
YER088W-BYER088W-B IXR1P33417 597 aa16.62■□□□□ 0.25
YER088W-BYER088W-B VPS8P39702 1274 aa16.62■□□□□ 0.25
YER088W-BYER088W-B YJL007CP47080 104 aa16.62■□□□□ 0.25
YER088W-BYER088W-B GCR2Q01722 534 aa16.62■□□□□ 0.25
YER088W-BYER088W-B MYO3P36006 1272 aa16.61■□□□□ 0.25
YER088W-BYER088W-B MCD4P36051 919 aa16.61■□□□□ 0.25
YER088W-BYER088W-B SPB4P25808 606 aaPredicted RBP16.6■□□□□ 0.25
YER088W-BYER088W-B VAB2P40003 282 aa16.6■□□□□ 0.25
YER088W-BYER088W-B HXT17P53631 564 aa16.6■□□□□ 0.25
YER088W-BYER088W-B ACE2P21192 770 aa16.59■□□□□ 0.25
YER088W-BYER088W-B ANP1P32629 500 aa16.59■□□□□ 0.25
YER088W-BYER088W-B ERG7P38604 731 aa16.59■□□□□ 0.25
YER088W-BYER088W-B YLR225CQ05948 407 aaKnown RBP16.59■□□□□ 0.25
YER088W-BYER088W-B SGD1Q06132 899 aa16.59■□□□□ 0.25
YER088W-BYER088W-B SPN1Q06505 410 aaPredicted RBP16.59■□□□□ 0.25
YER088W-BYER088W-B CFT2Q12102 859 aaPredicted RBP16.59■□□□□ 0.25
YER088W-BYER088W-B RIT1P23796 513 aa16.58■□□□□ 0.24
YER088W-BYER088W-B CRG1P38892 291 aaRIP-Chip data16.58■□□□□ 0.24not detected
YER088W-BYER088W-B HDA1P53973 706 aa16.58■□□□□ 0.24
YER088W-BYER088W-B TUS1Q06412 1307 aa16.57■□□□□ 0.24
YER088W-BYER088W-B SAM2P19358 384 aaKnown RBP16.57■□□□□ 0.24
YER088W-BYER088W-B RER2P35196 286 aa16.57■□□□□ 0.24
YER088W-BYER088W-B HXT13P39924 564 aa16.57■□□□□ 0.24
YER088W-BYER088W-B PGA3Q12746 312 aaKnown RBP16.57■□□□□ 0.24
YER088W-BYER088W-B PER1P25625 357 aa16.56■□□□□ 0.24
YER088W-BYER088W-B DLD1P32891 587 aa16.56■□□□□ 0.24
YER088W-BYER088W-B CIC1P38779 376 aaKnown RBP16.56■□□□□ 0.24
YER088W-BYER088W-B YML037CQ03703 340 aa16.56■□□□□ 0.24
YER088W-BYER088W-B TPM1P17536 199 aaKnown RBP16.55■□□□□ 0.24
YER088W-BYER088W-B IMP2'P32351 346 aa16.55■□□□□ 0.24
YER088W-BYER088W-B PTK2P47116 818 aaKnown RBP16.55■□□□□ 0.24
YER088W-BYER088W-B UBX5Q06682 500 aa16.55■□□□□ 0.24
YER088W-BYER088W-B CDC60P26637 1090 aaKnown RBP16.53■□□□□ 0.24
YER088W-BYER088W-B UBP9P39967 754 aa16.52■□□□□ 0.24
YER088W-BYER088W-B SOL4P53315 255 aa16.52■□□□□ 0.24
YER088W-BYER088W-B FOL1P53848 824 aa16.52■□□□□ 0.24
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms