RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	KIN1	P13185	1064 aa		11.8	□□□□□ -0.52
MRP20	YDR405W	RSC30	P38781	883 aa		11.8	□□□□□ -0.52
MRP20	YDR405W	GIN4	Q12263	1142 aa		11.8	□□□□□ -0.52
MRP20	YDR405W	FLO1	P32768	1537 aa		11.8	□□□□□ -0.52
MRP20	YDR405W	PIB2	P53191	635 aa		11.79	□□□□□ -0.52
MRP20	YDR405W	PKH3	Q03306	898 aa	Predicted RBP	11.79	□□□□□ -0.52
MRP20	YDR405W	RMD1	Q03441	430 aa		11.79	□□□□□ -0.52
MRP20	YDR405W	YPL260W	Q08977	551 aa		11.79	□□□□□ -0.52
MRP20	YDR405W	KEL3	Q08979	651 aa	Predicted RBP	11.79	□□□□□ -0.52
MRP20	YDR405W	MPH3	P0CE00	602 aa		11.78	□□□□□ -0.52
MRP20	YDR405W	YBL028C	P38202	106 aa		11.78	□□□□□ -0.52
MRP20	YDR405W	RBA50	Q04418	439 aa		11.78	□□□□□ -0.52
MRP20	YDR405W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.77	□□□□□ -0.53	not detected
MRP20	YDR405W	APE3	P37302	537 aa	Known RBP	11.77	□□□□□ -0.53
MRP20	YDR405W	RTS1	P38903	757 aa		11.77	□□□□□ -0.53
MRP20	YDR405W	STM1	P39015	273 aa	Known RBP	11.77	□□□□□ -0.53
MRP20	YDR405W	PPM2	Q08282	695 aa		11.77	□□□□□ -0.53
MRP20	YDR405W	VAS1	P07806	1104 aa	Known RBP	11.75	□□□□□ -0.53
MRP20	YDR405W	MET1	P36150	593 aa		11.75	□□□□□ -0.53
MRP20	YDR405W	YDL124W	Q07551	312 aa	Known RBP	11.75	□□□□□ -0.53
MRP20	YDR405W	TOM1	Q03280	3268 aa		11.74	□□□□□ -0.53
MRP20	YDR405W	PRE8	P23639	250 aa		11.74	□□□□□ -0.53
MRP20	YDR405W	MOT2	P34909	587 aa	Known RBP	11.74	□□□□□ -0.53
MRP20	YDR405W	CST26	P38226	397 aa		11.74	□□□□□ -0.53
MRP20	YDR405W	RRP8	P38961	392 aa	Known RBP	11.74	□□□□□ -0.53
MRP20	YDR405W	SLN1	P39928	1220 aa	Predicted RBP	11.74	□□□□□ -0.53
MRP20	YDR405W	SUB2	Q07478	446 aa	Known RBP	11.74	□□□□□ -0.53
MRP20	YDR405W	RIM20	Q12033	661 aa		11.74	□□□□□ -0.53
MRP20	YDR405W	LAM4	P38800	1345 aa		11.74	□□□□□ -0.53
MRP20	YDR405W	OCT1	P35999	772 aa		11.73	□□□□□ -0.53
MRP20	YDR405W	MRD1	Q06106	887 aa	Known RBP	11.73	□□□□□ -0.53
MRP20	YDR405W	SSF2	Q12153	453 aa	Predicted RBP	11.73	□□□□□ -0.53
MRP20	YDR405W	TPM1	P17536	199 aa	Known RBP	11.72	□□□□□ -0.53
MRP20	YDR405W	COQ1	P18900	473 aa		11.72	□□□□□ -0.53
MRP20	YDR405W	SRM1	P21827	482 aa		11.72	□□□□□ -0.53
MRP20	YDR405W	ACA1	P39970	489 aa		11.72	□□□□□ -0.53
MRP20	YDR405W	TUB2	P02557	457 aa	Known RBP	11.71	□□□□□ -0.53
MRP20	YDR405W	PES4	P39684	611 aa		11.71	□□□□□ -0.53
MRP20	YDR405W	NET1	P47035	1189 aa		11.71	□□□□□ -0.53
MRP20	YDR405W	FPR4	Q06205	392 aa	Predicted RBP	11.71	□□□□□ -0.53
MRP20	YDR405W	RAD61	Q99359	647 aa		11.71	□□□□□ -0.53
MRP20	YDR405W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	not detected
MRP20	YDR405W	VAB2	P40003	282 aa		11.7	□□□□□ -0.54
MRP20	YDR405W	LYS14	P40971	790 aa		11.7	□□□□□ -0.54
MRP20	YDR405W	SKG3	Q06315	1026 aa		11.7	□□□□□ -0.54
MRP20	YDR405W	ERG12	P07277	443 aa		11.69	□□□□□ -0.54
MRP20	YDR405W	AAP1	P37898	856 aa	Known RBP	11.69	□□□□□ -0.54
MRP20	YDR405W	SPR3	P41901	512 aa		11.69	□□□□□ -0.54
MRP20	YDR405W	JIP4	Q03361	876 aa		11.69	□□□□□ -0.54
MRP20	YDR405W	PEX29	Q03370	554 aa		11.69	□□□□□ -0.54
MRP20	YDR405W	VID27	P40157	782 aa		11.68	□□□□□ -0.54
MRP20	YDR405W	NCS6	P53088	359 aa		11.68	□□□□□ -0.54
MRP20	YDR405W	RPS15	Q01855	142 aa	Known RBP	11.68	□□□□□ -0.54
MRP20	YDR405W	LAP2	Q10740	671 aa		11.68	□□□□□ -0.54
MRP20	YDR405W	PER1	P25625	357 aa		11.67	□□□□□ -0.54
MRP20	YDR405W	ASH1	P34233	588 aa		11.67	□□□□□ -0.54
MRP20	YDR405W	YHL050C	P38721	697 aa		11.67	□□□□□ -0.54
MRP20	YDR405W	TIF4631	P39935	952 aa	Known RBP	11.67	□□□□□ -0.54
MRP20	YDR405W	GSC2	P40989	1895 aa		11.67	□□□□□ -0.54
MRP20	YDR405W	MCD4	P36051	919 aa		11.66	□□□□□ -0.54
MRP20	YDR405W	CRG1	P38892	291 aa	RIP-Chip data	11.66	□□□□□ -0.54	not detected
MRP20	YDR405W	UFD2	P54860	961 aa		11.66	□□□□□ -0.54
MRP20	YDR405W	GCR2	Q01722	534 aa		11.66	□□□□□ -0.54
MRP20	YDR405W	SPN1	Q06505	410 aa	Predicted RBP	11.66	□□□□□ -0.54
MRP20	YDR405W	SPB4	P25808	606 aa	Predicted RBP	11.65	□□□□□ -0.54
MRP20	YDR405W	SPT21	P35209	758 aa		11.65	□□□□□ -0.54
MRP20	YDR405W	VPS8	P39702	1274 aa		11.65	□□□□□ -0.54
MRP20	YDR405W	CHO2	P05374	869 aa	Known RBP	11.64	□□□□□ -0.55
MRP20	YDR405W	MYO3	P36006	1272 aa		11.64	□□□□□ -0.55
MRP20	YDR405W	BRN1	P38170	754 aa		11.64	□□□□□ -0.55
MRP20	YDR405W	SOL4	P53315	255 aa		11.64	□□□□□ -0.55
MRP20	YDR405W	CFT2	Q12102	859 aa	Predicted RBP	11.64	□□□□□ -0.55
MRP20	YDR405W	TUS1	Q06412	1307 aa		11.63	□□□□□ -0.55
MRP20	YDR405W	ERG7	P38604	731 aa		11.63	□□□□□ -0.55
MRP20	YDR405W	YLR225C	Q05948	407 aa	Known RBP	11.63	□□□□□ -0.55
MRP20	YDR405W	FBP1	P09201	348 aa		11.62	□□□□□ -0.55
MRP20	YDR405W	DIT2	P21595	489 aa		11.62	□□□□□ -0.55
MRP20	YDR405W	YDJ1	P25491	409 aa	Known RBP	11.62	□□□□□ -0.55
MRP20	YDR405W	TY3A-G	Q12173	290 aa		11.62	□□□□□ -0.55
MRP20	YDR405W	CLF1	Q12309	687 aa	Predicted RBP	11.62	□□□□□ -0.55
MRP20	YDR405W	TY3A-I	Q99219	290 aa		11.62	□□□□□ -0.55
MRP20	YDR405W	ANP1	P32629	500 aa		11.61	□□□□□ -0.55
MRP20	YDR405W	SGD1	Q06132	899 aa		11.61	□□□□□ -0.55
MRP20	YDR405W	CDC60	P26637	1090 aa	Known RBP	11.6	□□□□□ -0.55
MRP20	YDR405W	CHS3	P29465	1165 aa		11.6	□□□□□ -0.55
MRP20	YDR405W	RER2	P35196	286 aa		11.6	□□□□□ -0.55
MRP20	YDR405W	YJL007C	P47080	104 aa		11.6	□□□□□ -0.55
MRP20	YDR405W	YAF9	P53930	226 aa		11.6	□□□□□ -0.55
MRP20	YDR405W	RIT1	P23796	513 aa		11.59	□□□□□ -0.55
MRP20	YDR405W	SPO22	P40511	975 aa		11.59	□□□□□ -0.55
MRP20	YDR405W	KRS1	P15180	591 aa	Known RBP	11.58	□□□□□ -0.56
MRP20	YDR405W	PEP3	P27801	918 aa		11.58	□□□□□ -0.56
MRP20	YDR405W	DLD1	P32891	587 aa		11.58	□□□□□ -0.56
MRP20	YDR405W	IXR1	P33417	597 aa		11.58	□□□□□ -0.56
MRP20	YDR405W	ALG2	P43636	503 aa		11.58	□□□□□ -0.56
MRP20	YDR405W	FOL1	P53848	824 aa		11.58	□□□□□ -0.56
MRP20	YDR405W	YML037C	Q03703	340 aa		11.58	□□□□□ -0.56
MRP20	YDR405W	UBX5	Q06682	500 aa		11.58	□□□□□ -0.56
MRP20	YDR405W	PRO3	P32263	286 aa	Known RBP	11.57	□□□□□ -0.56
MRP20	YDR405W	YKR018C	P36114	725 aa		11.57	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms