RNA–Protein interactions for RNA: YBR195C

MSI1, Transcript of Subunit of chromatin assembly factor I (CAF-1), yeastyeast

Gene MSI1, Length 1,269 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSI1YBR195C YJL171CP46992 396 aa8.69□□□□□ -1.02
MSI1YBR195C RRT6P53117 311 aaPredicted RBP8.69□□□□□ -1.02
MSI1YBR195C MRPS35P53292 345 aa8.69□□□□□ -1.02
MSI1YBR195C KTR1P27810 393 aaKnown RBP8.68□□□□□ -1.02
MSI1YBR195C NPL4P33755 580 aa8.68□□□□□ -1.02
MSI1YBR195C IOC3P43596 787 aa8.68□□□□□ -1.02
MSI1YBR195C TYW1Q08960 810 aaKnown RBP8.68□□□□□ -1.02
MSI1YBR195C PMA1P05030 918 aaKnown RBP8.67□□□□□ -1.02
MSI1YBR195C VAS1P07806 1104 aaKnown RBP8.67□□□□□ -1.02
MSI1YBR195C ADP1P25371 1049 aa8.67□□□□□ -1.02
MSI1YBR195C RRP8P38961 392 aaKnown RBP8.67□□□□□ -1.02
MSI1YBR195C PNT1P38969 423 aa8.67□□□□□ -1.02
MSI1YBR195C NOP2P40991 618 aaKnown RBP8.67□□□□□ -1.02
MSI1YBR195C PIB2P53191 635 aa8.67□□□□□ -1.02
MSI1YBR195C CSR2Q12734 1121 aa8.67□□□□□ -1.02
MSI1YBR195C RAD50P12753 1312 aa8.66□□□□□ -1.02
MSI1YBR195C RAD53P22216 821 aa8.66□□□□□ -1.02
MSI1YBR195C TPS3P38426 1054 aaKnown RBP8.66□□□□□ -1.02
MSI1YBR195C NSG2P53898 299 aa8.66□□□□□ -1.02
MSI1YBR195C BSD2P38356 321 aa8.65□□□□□ -1.02
MSI1YBR195C ETP1P38748 585 aaKnown RBP8.65□□□□□ -1.02
MSI1YBR195C MSH4P40965 878 aaPredicted RBP8.65□□□□□ -1.02
MSI1YBR195C PCL8Q08966 492 aa8.65□□□□□ -1.02
MSI1YBR195C YPL260WQ08977 551 aa8.65□□□□□ -1.02
MSI1YBR195C KEL3Q08979 651 aaPredicted RBP8.65□□□□□ -1.02
MSI1YBR195C PCS60P38137 543 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
MSI1YBR195C YBL028CP38202 106 aa8.64□□□□□ -1.03
MSI1YBR195C KEL1P38853 1164 aaKnown RBP8.64□□□□□ -1.03
MSI1YBR195C SLN1P39928 1220 aaPredicted RBP8.64□□□□□ -1.03
MSI1YBR195C SNU71P53207 620 aaKnown RBP8.64□□□□□ -1.03
MSI1YBR195C FPR4Q06205 392 aaPredicted RBP8.64□□□□□ -1.03
MSI1YBR195C RIM20Q12033 661 aa8.64□□□□□ -1.03
MSI1YBR195C TAH18Q12181 623 aa8.64□□□□□ -1.03
MSI1YBR195C FLO1P32768 1537 aa8.64□□□□□ -1.03
MSI1YBR195C PFK2P16862 959 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
MSI1YBR195C OPI1P21957 404 aa8.63□□□□□ -1.03
MSI1YBR195C KAR5Q04746 504 aa8.63□□□□□ -1.03
MSI1YBR195C MRD1Q06106 887 aaKnown RBP8.63□□□□□ -1.03
MSI1YBR195C GIN4Q12263 1142 aa8.63□□□□□ -1.03
MSI1YBR195C TPM1P17536 199 aaKnown RBP8.62□□□□□ -1.03
MSI1YBR195C MRM1P25270 412 aa8.62□□□□□ -1.03
MSI1YBR195C MET1P36150 593 aa8.62□□□□□ -1.03
MSI1YBR195C TGL3P40308 642 aa8.62□□□□□ -1.03
MSI1YBR195C YDL124WQ07551 312 aaKnown RBP8.62□□□□□ -1.03
MSI1YBR195C RTS1P38903 757 aa8.61□□□□□ -1.03
MSI1YBR195C DUS1P53759 423 aaKnown RBP8.61□□□□□ -1.03
MSI1YBR195C PKH3Q03306 898 aaPredicted RBP8.61□□□□□ -1.03
MSI1YBR195C PEX29Q03370 554 aa8.61□□□□□ -1.03
MSI1YBR195C TIF6Q12522 245 aaKnown RBP8.61□□□□□ -1.03
MSI1YBR195C LAM4P38800 1345 aa8.6□□□□□ -1.03
MSI1YBR195C MPH3P0CE00 602 aa8.6□□□□□ -1.03
MSI1YBR195C HVG1P0CE11 249 aa8.6□□□□□ -1.03
MSI1YBR195C KIN1P13185 1064 aa8.6□□□□□ -1.03
MSI1YBR195C CST26P38226 397 aa8.6□□□□□ -1.03
MSI1YBR195C DMA1P38823 416 aa8.6□□□□□ -1.03
MSI1YBR195C COQ1P18900 473 aa8.59□□□□□ -1.03
MSI1YBR195C RSC30P38781 883 aa8.59□□□□□ -1.03
MSI1YBR195C ACA1P39970 489 aa8.59□□□□□ -1.03
MSI1YBR195C RBA50Q04418 439 aa8.59□□□□□ -1.03
MSI1YBR195C PPM2Q08282 695 aa8.59□□□□□ -1.03
MSI1YBR195C SSF2Q12153 453 aaPredicted RBP8.59□□□□□ -1.03
MSI1YBR195C TUB2P02557 457 aaKnown RBP8.58□□□□□ -1.04
MSI1YBR195C SRM1P21827 482 aa8.58□□□□□ -1.04
MSI1YBR195C PRE8P23639 250 aa8.58□□□□□ -1.04
MSI1YBR195C AAP1P37898 856 aaKnown RBP8.58□□□□□ -1.04
MSI1YBR195C BRN1P38170 754 aa8.58□□□□□ -1.04
MSI1YBR195C VID27P40157 782 aa8.58□□□□□ -1.04
MSI1YBR195C UFD2P54860 961 aa8.58□□□□□ -1.04
MSI1YBR195C JIP4Q03361 876 aa8.58□□□□□ -1.04
MSI1YBR195C LAP2Q10740 671 aa8.58□□□□□ -1.04
MSI1YBR195C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
MSI1YBR195C OCT1P35999 772 aa8.57□□□□□ -1.04
MSI1YBR195C APE3P37302 537 aaKnown RBP8.57□□□□□ -1.04
MSI1YBR195C VPS8P39702 1274 aa8.57□□□□□ -1.04
MSI1YBR195C RAD61Q99359 647 aa8.57□□□□□ -1.04
MSI1YBR195C CHO2P05374 869 aaKnown RBP8.56□□□□□ -1.04
MSI1YBR195C YHL050CP38721 697 aa8.56□□□□□ -1.04
MSI1YBR195C LYS14P40971 790 aa8.56□□□□□ -1.04
MSI1YBR195C GCR2Q01722 534 aa8.56□□□□□ -1.04
MSI1YBR195C RPS15Q01855 142 aaKnown RBP8.56□□□□□ -1.04
MSI1YBR195C MCD4P36051 919 aa8.55□□□□□ -1.04
MSI1YBR195C SUB2Q07478 446 aaKnown RBP8.55□□□□□ -1.04
MSI1YBR195C SRF1Q12516 437 aa8.55□□□□□ -1.04
MSI1YBR195C IMP2'P32351 346 aa8.54□□□□□ -1.04
MSI1YBR195C DLD1P32891 587 aa8.54□□□□□ -1.04
MSI1YBR195C SIS2P36024 562 aa8.54□□□□□ -1.04
MSI1YBR195C VAB2P40003 282 aa8.54□□□□□ -1.04
MSI1YBR195C KRI1P42846 591 aaKnown RBP8.54□□□□□ -1.04
MSI1YBR195C ESF1Q06344 628 aaKnown RBP8.54□□□□□ -1.04
MSI1YBR195C SPN1Q06505 410 aaPredicted RBP8.54□□□□□ -1.04
MSI1YBR195C ERG12P07277 443 aa8.53□□□□□ -1.04
MSI1YBR195C RIT1P23796 513 aa8.53□□□□□ -1.04
MSI1YBR195C ASH1P34233 588 aa8.53□□□□□ -1.04
MSI1YBR195C CIC1P38779 376 aaKnown RBP8.53□□□□□ -1.04
MSI1YBR195C CRG1P38892 291 aaRIP-Chip data8.53□□□□□ -1.04not detected
MSI1YBR195C SPR3P41901 512 aa8.53□□□□□ -1.04
MSI1YBR195C HXT17P53631 564 aa8.53□□□□□ -1.04
MSI1YBR195C GSC2P40989 1895 aa8.52□□□□□ -1.05
MSI1YBR195C KRS1P15180 591 aaKnown RBP8.52□□□□□ -1.05
MSI1YBR195C CHS3P29465 1165 aa8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms