RNA–Protein interactions for RNA: YAL042W

ERV46, Transcript of Protein localized to COPII-coated vesicles, yeast

Gene ERV46, Length 1,248 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERV46	YAL042W	TUB2	P02557	457 aa	Known RBP	13.96	□□□□□ -0.17
ERV46	YAL042W	CDC16	P09798	840 aa		13.96	□□□□□ -0.17
ERV46	YAL042W	RSC30	P38781	883 aa		13.96	□□□□□ -0.17
ERV46	YAL042W	JIP4	Q03361	876 aa		13.96	□□□□□ -0.17
ERV46	YAL042W	YDL124W	Q07551	312 aa	Known RBP	13.96	□□□□□ -0.17
ERV46	YAL042W	SRF1	Q12516	437 aa		13.96	□□□□□ -0.17
ERV46	YAL042W	MSH4	P40965	878 aa	Predicted RBP	13.95	□□□□□ -0.18
ERV46	YAL042W	KAR5	Q04746	504 aa		13.95	□□□□□ -0.18
ERV46	YAL042W	ACA1	P39970	489 aa		13.94	□□□□□ -0.18
ERV46	YAL042W	IOC3	P43596	787 aa		13.94	□□□□□ -0.18
ERV46	YAL042W	YPL260W	Q08977	551 aa		13.94	□□□□□ -0.18
ERV46	YAL042W	KTR1	P27810	393 aa	Known RBP	13.93	□□□□□ -0.18
ERV46	YAL042W	NPL4	P33755	580 aa		13.93	□□□□□ -0.18
ERV46	YAL042W	MOT2	P34909	587 aa	Known RBP	13.93	□□□□□ -0.18
ERV46	YAL042W	OSH3	P38713	996 aa	Known RBP	13.93	□□□□□ -0.18
ERV46	YAL042W	STM1	P39015	273 aa	Known RBP	13.93	□□□□□ -0.18
ERV46	YAL042W	KIN1	P13185	1064 aa		13.92	□□□□□ -0.18
ERV46	YAL042W	ASH1	P34233	588 aa		13.91	□□□□□ -0.18
ERV46	YAL042W	BBC1	P47068	1157 aa		13.91	□□□□□ -0.18
ERV46	YAL042W	SNU71	P53207	620 aa	Known RBP	13.91	□□□□□ -0.18
ERV46	YAL042W	ECM16	Q04217	1267 aa	Known RBP	13.91	□□□□□ -0.18
ERV46	YAL042W	RRP8	P38961	392 aa	Known RBP	13.9	□□□□□ -0.18
ERV46	YAL042W	TAH18	Q12181	623 aa		13.9	□□□□□ -0.18
ERV46	YAL042W	LAM4	P38800	1345 aa		13.9	□□□□□ -0.19
ERV46	YAL042W	MPH3	P0CE00	602 aa		13.89	□□□□□ -0.19
ERV46	YAL042W	OCT1	P35999	772 aa		13.89	□□□□□ -0.19
ERV46	YAL042W	CST26	P38226	397 aa		13.89	□□□□□ -0.19
ERV46	YAL042W	SLN1	P39928	1220 aa	Predicted RBP	13.89	□□□□□ -0.19
ERV46	YAL042W	COQ1	P18900	473 aa		13.88	□□□□□ -0.19
ERV46	YAL042W	YHL050C	P38721	697 aa		13.88	□□□□□ -0.19
ERV46	YAL042W	NCS6	P53088	359 aa		13.88	□□□□□ -0.19
ERV46	YAL042W	PKH3	Q03306	898 aa	Predicted RBP	13.88	□□□□□ -0.19
ERV46	YAL042W	MRD1	Q06106	887 aa	Known RBP	13.88	□□□□□ -0.19
ERV46	YAL042W	LAP2	Q10740	671 aa		13.88	□□□□□ -0.19
ERV46	YAL042W	PRE8	P23639	250 aa		13.86	□□□□□ -0.19
ERV46	YAL042W	RTS1	P38903	757 aa		13.86	□□□□□ -0.19
ERV46	YAL042W	SGD1	Q06132	899 aa		13.86	□□□□□ -0.19
ERV46	YAL042W	RIM20	Q12033	661 aa		13.86	□□□□□ -0.19
ERV46	YAL042W	VAS1	P07806	1104 aa	Known RBP	13.85	□□□□□ -0.19
ERV46	YAL042W	FBP1	P09201	348 aa		13.85	□□□□□ -0.19
ERV46	YAL042W	OPI1	P21957	404 aa		13.85	□□□□□ -0.19
ERV46	YAL042W	YDJ1	P25491	409 aa	Known RBP	13.85	□□□□□ -0.19
ERV46	YAL042W	VID27	P40157	782 aa		13.85	□□□□□ -0.19
ERV46	YAL042W	SPR3	P41901	512 aa		13.85	□□□□□ -0.19
ERV46	YAL042W	RAD50	P12753	1312 aa		13.85	□□□□□ -0.19
ERV46	YAL042W	CHO2	P05374	869 aa	Known RBP	13.84	□□□□□ -0.19
ERV46	YAL042W	KRS1	P15180	591 aa	Known RBP	13.84	□□□□□ -0.19
ERV46	YAL042W	SRM1	P21827	482 aa		13.84	□□□□□ -0.19
ERV46	YAL042W	IXR1	P33417	597 aa		13.84	□□□□□ -0.19
ERV46	YAL042W	LYS14	P40971	790 aa		13.84	□□□□□ -0.19
ERV46	YAL042W	MCD4	P36051	919 aa		13.83	□□□□□ -0.2
ERV46	YAL042W	MET1	P36150	593 aa		13.83	□□□□□ -0.2
ERV46	YAL042W	NET1	P47035	1189 aa		13.83	□□□□□ -0.2
ERV46	YAL042W	RAD61	Q99359	647 aa		13.83	□□□□□ -0.2
ERV46	YAL042W	ERG7	P38604	731 aa		13.82	□□□□□ -0.2
ERV46	YAL042W	YLR225C	Q05948	407 aa	Known RBP	13.82	□□□□□ -0.2
ERV46	YAL042W	TIF4631	P39935	952 aa	Known RBP	13.81	□□□□□ -0.2
ERV46	YAL042W	VAB2	P40003	282 aa		13.81	□□□□□ -0.2
ERV46	YAL042W	UFD2	P54860	961 aa		13.81	□□□□□ -0.2
ERV46	YAL042W	FPR4	Q06205	392 aa	Predicted RBP	13.81	□□□□□ -0.2
ERV46	YAL042W	SUB2	Q07478	446 aa	Known RBP	13.8	□□□□□ -0.2
ERV46	YAL042W	CFT2	Q12102	859 aa	Predicted RBP	13.8	□□□□□ -0.2
ERV46	YAL042W	ERG12	P07277	443 aa		13.79	□□□□□ -0.2
ERV46	YAL042W	VPS8	P39702	1274 aa		13.79	□□□□□ -0.2
ERV46	YAL042W	YJL007C	P47080	104 aa		13.79	□□□□□ -0.2
ERV46	YAL042W	RPS15	Q01855	142 aa	Known RBP	13.79	□□□□□ -0.2
ERV46	YAL042W	SKG3	Q06315	1026 aa		13.79	□□□□□ -0.2
ERV46	YAL042W	SDH2	P21801	266 aa		13.78	□□□□□ -0.2
ERV46	YAL042W	CHS3	P29465	1165 aa		13.78	□□□□□ -0.2
ERV46	YAL042W	AAP1	P37898	856 aa	Known RBP	13.78	□□□□□ -0.2
ERV46	YAL042W	ACE2	P21192	770 aa		13.77	□□□□□ -0.21
ERV46	YAL042W	PRO3	P32263	286 aa	Known RBP	13.77	□□□□□ -0.21
ERV46	YAL042W	YML037C	Q03703	340 aa		13.77	□□□□□ -0.21
ERV46	YAL042W	SSF2	Q12153	453 aa	Predicted RBP	13.77	□□□□□ -0.21
ERV46	YAL042W	CDC60	P26637	1090 aa	Known RBP	13.76	□□□□□ -0.21
ERV46	YAL042W	SRS2	P12954	1174 aa		13.75	□□□□□ -0.21
ERV46	YAL042W	SAM2	P19358	384 aa	Known RBP	13.75	□□□□□ -0.21
ERV46	YAL042W	RIT1	P23796	513 aa		13.75	□□□□□ -0.21
ERV46	YAL042W	ATG1	P53104	897 aa		13.75	□□□□□ -0.21
ERV46	YAL042W	SPB4	P25808	606 aa	Predicted RBP	13.74	□□□□□ -0.21
ERV46	YAL042W	BRN1	P38170	754 aa		13.74	□□□□□ -0.21
ERV46	YAL042W	UBX5	Q06682	500 aa		13.74	□□□□□ -0.21
ERV46	YAL042W	PER1	P25625	357 aa		13.73	□□□□□ -0.21
ERV46	YAL042W	ANP1	P32629	500 aa		13.73	□□□□□ -0.21
ERV46	YAL042W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.73	□□□□□ -0.21	not detected
ERV46	YAL042W	PAM1	P37304	830 aa	Known RBP	13.72	□□□□□ -0.21
ERV46	YAL042W	SPN1	Q06505	410 aa	Predicted RBP	13.72	□□□□□ -0.21
ERV46	YAL042W	TY3A-G	Q12173	290 aa		13.72	□□□□□ -0.21
ERV46	YAL042W	TY3A-I	Q99219	290 aa		13.72	□□□□□ -0.21
ERV46	YAL042W	IMP2'	P32351	346 aa		13.71	□□□□□ -0.21
ERV46	YAL042W	MYO3	P36006	1272 aa		13.71	□□□□□ -0.21
ERV46	YAL042W	HDA1	P53973	706 aa		13.71	□□□□□ -0.21
ERV46	YAL042W	PGA3	Q12746	312 aa	Known RBP	13.71	□□□□□ -0.21
ERV46	YAL042W	TUS1	Q06412	1307 aa		13.7	□□□□□ -0.22
ERV46	YAL042W	CIC1	P38779	376 aa	Known RBP	13.7	□□□□□ -0.22
ERV46	YAL042W	UBP9	P39967	754 aa		13.7	□□□□□ -0.22
ERV46	YAL042W	VMA2	P16140	517 aa	Known RBP	13.69	□□□□□ -0.22
ERV46	YAL042W	TPM1	P17536	199 aa	Known RBP	13.69	□□□□□ -0.22
ERV46	YAL042W	RER2	P35196	286 aa		13.69	□□□□□ -0.22
ERV46	YAL042W	CRG1	P38892	291 aa	RIP-Chip data	13.69	□□□□□ -0.22	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms