RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 SETBP1Q9Y6X0 1596 aa9.5□□□□□ -0.89
C11orf54-207ENST00000528288 MYO3AQ8NEV4 1616 aa9.5□□□□□ -0.89
C11orf54-207ENST00000528288 DIAPH1O60610 1272 aaKnown RBP9.5□□□□□ -0.89
C11orf54-207ENST00000528288 CAMSAP1Q5T5Y3 1602 aa9.5□□□□□ -0.89
C11orf54-207ENST00000528288 HECW2Q9P2P5 1572 aa9.49□□□□□ -0.89
C11orf54-207ENST00000528288 TERF2IPQ9NYB0 399 aa9.49□□□□□ -0.89
C11orf54-207ENST00000528288 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
C11orf54-207ENST00000528288 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
C11orf54-207ENST00000528288 PHACTR3Q96KR7 559 aa9.49□□□□□ -0.89
C11orf54-207ENST00000528288 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
C11orf54-207ENST00000528288 EMILIN1Q9Y6C2 1016 aa9.48□□□□□ -0.89
C11orf54-207ENST00000528288 NEXMIFQ5QGS0 1516 aa9.48□□□□□ -0.89
C11orf54-207ENST00000528288 NEURL4Q96JN8 1562 aa9.48□□□□□ -0.89
C11orf54-207ENST00000528288 HDGFL2Q7Z4V5 671 aaPredicted RBP9.48□□□□□ -0.89
C11orf54-207ENST00000528288 ZC3H13Q5T200 1668 aaKnown RBP9.48□□□□□ -0.89
C11orf54-207ENST00000528288 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
C11orf54-207ENST00000528288 SOX12O15370 315 aa9.47□□□□□ -0.89
C11orf54-207ENST00000528288 PLPPR3Q6T4P5 718 aa9.47□□□□□ -0.89
C11orf54-207ENST00000528288 ATF7IPQ6VMQ6 1270 aa9.47□□□□□ -0.89
C11orf54-207ENST00000528288 TBC1D2Q9BYX2 928 aa9.47□□□□□ -0.89
C11orf54-207ENST00000528288 UPF2Q9HAU5 1272 aaKnown RBP9.47□□□□□ -0.89
C11orf54-207ENST00000528288 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
C11orf54-207ENST00000528288 ABCC11Q96J66 1382 aa9.47□□□□□ -0.89
C11orf54-207ENST00000528288 RRS1Q15050 365 aaKnown RBP9.46□□□□□ -0.89
C11orf54-207ENST00000528288 NME9Q86XW9 330 aa9.46□□□□□ -0.89
C11orf54-207ENST00000528288 TSPYL6Q8N831 410 aa9.46□□□□□ -0.89
C11orf54-207ENST00000528288 ARHGEF28Q8N1W1 1705 aaKnown RBP9.46□□□□□ -0.89
C11orf54-207ENST00000528288 FAM69CQ0P6D2 419 aa9.46□□□□□ -0.89
C11orf54-207ENST00000528288 DCTN1Q14203 1278 aa9.46□□□□□ -0.89
C11orf54-207ENST00000528288 NINLQ9Y2I6 1382 aa9.46□□□□□ -0.89
C11orf54-207ENST00000528288 TXNDC2Q86VQ3 553 aa9.46□□□□□ -0.9
C11orf54-207ENST00000528288 YTHDC2Q9H6S0 1430 aaKnown RBP9.46□□□□□ -0.9
C11orf54-207ENST00000528288 MYO5BQ9ULV0 1848 aa9.46□□□□□ -0.9
C11orf54-207ENST00000528288 FAM83GA6ND36 823 aa9.46□□□□□ -0.9
C11orf54-207ENST00000528288 BECN1Q14457 450 aa9.46□□□□□ -0.9
C11orf54-207ENST00000528288 POLKQ9UBT6 870 aa9.46□□□□□ -0.9
C11orf54-207ENST00000528288 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
C11orf54-207ENST00000528288 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
C11orf54-207ENST00000528288 GZF1Q9H116 711 aaPredicted RBP9.45□□□□□ -0.9
C11orf54-207ENST00000528288 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
C11orf54-207ENST00000528288 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
C11orf54-207ENST00000528288 DIP2CQ9Y2E4 1556 aa9.44□□□□□ -0.9
C11orf54-207ENST00000528288 NSD2O96028 1365 aa9.44□□□□□ -0.9
C11orf54-207ENST00000528288 DDX19BQ9UMR2 479 aa9.44□□□□□ -0.9
C11orf54-207ENST00000528288 NLRP1Q9C000 1473 aa9.44□□□□□ -0.9
C11orf54-207ENST00000528288 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
C11orf54-207ENST00000528288 PTPRMP28827 1452 aa9.43□□□□□ -0.9
C11orf54-207ENST00000528288 C22orf23Q9BZE7 217 aa9.43□□□□□ -0.9
C11orf54-207ENST00000528288 FOXD4L1Q9NU39 408 aa9.43□□□□□ -0.9
C11orf54-207ENST00000528288 RSPH6AQ9H0K4 717 aa9.43□□□□□ -0.9
C11orf54-207ENST00000528288 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
C11orf54-207ENST00000528288 KRT24Q2M2I5 525 aa9.42□□□□□ -0.9
C11orf54-207ENST00000528288 ANKRD45Q5TZF3 282 aa9.42□□□□□ -0.9
C11orf54-207ENST00000528288 ZBTB40Q9NUA8 1239 aa9.42□□□□□ -0.9
C11orf54-207ENST00000528288 PUS7Q96PZ0 661 aaKnown RBP9.42□□□□□ -0.9
C11orf54-207ENST00000528288 COL3A1P02461 1466 aaPredicted RBP9.41□□□□□ -0.9
C11orf54-207ENST00000528288 APBB1O00213 710 aa9.41□□□□□ -0.9
C11orf54-207ENST00000528288 FCHSD2O94868 740 aa9.41□□□□□ -0.9
C11orf54-207ENST00000528288 C8orf58Q8NAV2 365 aa9.41□□□□□ -0.9
C11orf54-207ENST00000528288 ANTXR1Q9H6X2 564 aa9.41□□□□□ -0.9
C11orf54-207ENST00000528288 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
C11orf54-207ENST00000528288 IPO8O15397 1037 aaKnown RBP9.4□□□□□ -0.9
C11orf54-207ENST00000528288 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
C11orf54-207ENST00000528288 VAMP4O75379 141 aa9.4□□□□□ -0.91
C11orf54-207ENST00000528288 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.91
C11orf54-207ENST00000528288 NEO1Q92859 1461 aa9.39□□□□□ -0.91
C11orf54-207ENST00000528288 NFE2L2Q16236 605 aa9.39□□□□□ -0.91
C11orf54-207ENST00000528288 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
C11orf54-207ENST00000528288 ADGRB2O60241 1585 aa9.39□□□□□ -0.91
C11orf54-207ENST00000528288 CFAP74Q9C0B2 1584 aa9.39□□□□□ -0.91
C11orf54-207ENST00000528288 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
C11orf54-207ENST00000528288 KIF16BQ96L93 1317 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 AAMPQ13685 434 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 CHD1LQ86WJ1 897 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 NUDT16Q96DE0 195 aaKnown RBP9.38□□□□□ -0.91
C11orf54-207ENST00000528288 MIS18AQ9NYP9 233 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 TMEM131LA2VDJ0 1609 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
C11orf54-207ENST00000528288 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
C11orf54-207ENST00000528288 ARHGAP31Q2M1Z3 1444 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 IL13P35225 146 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 TWISTNBQ3B726 338 aaPredicted RBP9.38□□□□□ -0.91
C11orf54-207ENST00000528288 RBM42Q9BTD8 480 aaKnown RBP9.38□□□□□ -0.91
C11orf54-207ENST00000528288 METP08581 1390 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 LRRC7Q96NW7 1537 aa9.38□□□□□ -0.91
C11orf54-207ENST00000528288 WASLO00401 505 aaPredicted RBP9.37□□□□□ -0.91
C11orf54-207ENST00000528288 ZBTB7BO15156 539 aaPredicted RBP9.37□□□□□ -0.91
C11orf54-207ENST00000528288 NUCB1Q02818 461 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 ARHGEF40Q8TER5 1519 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 TSPOAP1O95153 1857 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 MCM10Q7L590 875 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 SIRT2Q8IXJ6 389 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 IL16Q14005 1332 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 COG3Q96JB2 828 aa9.37□□□□□ -0.91
C11orf54-207ENST00000528288 PREX1Q8TCU6 1659 aa9.36□□□□□ -0.91
C11orf54-207ENST00000528288 C16orf71Q8IYS4 520 aaPredicted RBP9.36□□□□□ -0.91
C11orf54-207ENST00000528288 PNNQ9H307 717 aaKnown RBP9.36□□□□□ -0.91
C11orf54-207ENST00000528288 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms