RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-214ENST00000488128 FRMPD1Q5SYB0 1578 aa17.77■□□□□ 0.44
COL16A1-214ENST00000488128 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
COL16A1-214ENST00000488128 NCLP19338 710 aaKnown RBP17.77■□□□□ 0.43
COL16A1-214ENST00000488128 SSFA2P28290 1259 aa17.77■□□□□ 0.43
COL16A1-214ENST00000488128 KIAA1210Q9ULL0 1709 aa17.76■□□□□ 0.43
COL16A1-214ENST00000488128 NRXN1Q9ULB1 1477 aa17.76■□□□□ 0.43
COL16A1-214ENST00000488128 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
COL16A1-214ENST00000488128 STK26Q9P289 416 aa17.75■□□□□ 0.43
COL16A1-214ENST00000488128 ADGRB3O60242 1522 aa17.75■□□□□ 0.43
COL16A1-214ENST00000488128 GBP4Q96PP9 640 aa17.75■□□□□ 0.43
COL16A1-214ENST00000488128 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
COL16A1-214ENST00000488128 MLH3Q9UHC1 1453 aa17.74■□□□□ 0.43
COL16A1-214ENST00000488128 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
COL16A1-214ENST00000488128 NEURL4Q96JN8 1562 aa17.73■□□□□ 0.43
COL16A1-214ENST00000488128 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-214ENST00000488128 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
COL16A1-214ENST00000488128 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
COL16A1-214ENST00000488128 DDIT3P35638 169 aa17.73■□□□□ 0.43
COL16A1-214ENST00000488128 CABP2Q9NPB3 220 aa17.73■□□□□ 0.43
COL16A1-214ENST00000488128 DDX49Q9Y6V7 483 aaKnown RBP17.73■□□□□ 0.43
COL16A1-214ENST00000488128 AAMPQ13685 434 aa17.72■□□□□ 0.43
COL16A1-214ENST00000488128 IDI1Q13907 227 aa17.72■□□□□ 0.43
COL16A1-214ENST00000488128 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
COL16A1-214ENST00000488128 DDX19BQ9UMR2 479 aa17.72■□□□□ 0.43
COL16A1-214ENST00000488128 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
COL16A1-214ENST00000488128 GAS2L2Q8NHY3 880 aa17.71■□□□□ 0.43
COL16A1-214ENST00000488128 SMC5Q8IY18 1101 aa17.71■□□□□ 0.43
COL16A1-214ENST00000488128 ABCC3O15438 1527 aa17.7■□□□□ 0.42
COL16A1-214ENST00000488128 HDAC1Q13547 482 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-214ENST00000488128 KIF2CQ99661 725 aa17.7■□□□□ 0.42
COL16A1-214ENST00000488128 SBNO2Q9Y2G9 1366 aa17.7■□□□□ 0.42
COL16A1-214ENST00000488128 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
COL16A1-214ENST00000488128 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
COL16A1-214ENST00000488128 HECW2Q9P2P5 1572 aa17.7■□□□□ 0.42
COL16A1-214ENST00000488128 RBM25P49756 843 aaKnown RBP17.69■□□□□ 0.42
COL16A1-214ENST00000488128 VGFO15240 615 aaPredicted RBP17.69■□□□□ 0.42
COL16A1-214ENST00000488128 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
COL16A1-214ENST00000488128 FAM13BQ9NYF5 915 aa17.69■□□□□ 0.42
COL16A1-214ENST00000488128 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
COL16A1-214ENST00000488128 CHD1LQ86WJ1 897 aa17.69■□□□□ 0.42
COL16A1-214ENST00000488128 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
COL16A1-214ENST00000488128 ZBTB40Q9NUA8 1239 aa17.68■□□□□ 0.42
COL16A1-214ENST00000488128 ADGRB1O14514 1584 aa17.68■□□□□ 0.42
COL16A1-214ENST00000488128 MCTP1Q6DN14 999 aa17.67■□□□□ 0.42
COL16A1-214ENST00000488128 CYB5RLQ6IPT4 315 aa17.67■□□□□ 0.42
COL16A1-214ENST00000488128 R3HCC1Q9Y3T6 440 aaKnown RBP17.67■□□□□ 0.42
COL16A1-214ENST00000488128 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
COL16A1-214ENST00000488128 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
COL16A1-214ENST00000488128 NUCB1Q02818 461 aa17.66■□□□□ 0.42
COL16A1-214ENST00000488128 ANP32BQ92688 251 aaKnown RBP17.66■□□□□ 0.42
COL16A1-214ENST00000488128 PKP1Q13835 747 aa17.66■□□□□ 0.42
COL16A1-214ENST00000488128 SNX21Q969T3 373 aa17.66■□□□□ 0.42
COL16A1-214ENST00000488128 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
COL16A1-214ENST00000488128 YEATS2Q9ULM3 1422 aa17.66■□□□□ 0.42
COL16A1-214ENST00000488128 K7ELQ4 463 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-214ENST00000488128 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
COL16A1-214ENST00000488128 EVC2Q86UK5 1308 aa17.65■□□□□ 0.42
COL16A1-214ENST00000488128 ZMYM3Q14202 1370 aa17.65■□□□□ 0.42
COL16A1-214ENST00000488128 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
COL16A1-214ENST00000488128 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-214ENST00000488128 FBXO31Q5XUX0 539 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-214ENST00000488128 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-214ENST00000488128 TRIM35Q9UPQ4 493 aa17.65■□□□□ 0.42
COL16A1-214ENST00000488128 SRPK2P78362 688 aaKnown RBP17.65■□□□□ 0.42
COL16A1-214ENST00000488128 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-214ENST00000488128 IQSEC2Q5JU85 1478 aa17.65■□□□□ 0.42
COL16A1-214ENST00000488128 SETBP1Q9Y6X0 1596 aa17.65■□□□□ 0.42
COL16A1-214ENST00000488128 RIPK4P57078 832 aa17.64■□□□□ 0.41
COL16A1-214ENST00000488128 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
COL16A1-214ENST00000488128 SKOR2Q2VWA4 1001 aaPredicted RBP17.64■□□□□ 0.41
COL16A1-214ENST00000488128 ZSCAN30Q86W11 494 aa17.64■□□□□ 0.41
COL16A1-214ENST00000488128 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
COL16A1-214ENST00000488128 ISY1Q9ULR0 285 aaKnown RBP17.64■□□□□ 0.41
COL16A1-214ENST00000488128 SHPRHQ149N8 1683 aa17.63■□□□□ 0.41
COL16A1-214ENST00000488128 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
COL16A1-214ENST00000488128 PPLO60437 1756 aa17.63■□□□□ 0.41
COL16A1-214ENST00000488128 GOLGA6L22H0YM25 854 aa17.63■□□□□ 0.41
COL16A1-214ENST00000488128 TPM2P07951 284 aa17.63■□□□□ 0.41
COL16A1-214ENST00000488128 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
COL16A1-214ENST00000488128 MYO3AQ8NEV4 1616 aa17.63■□□□□ 0.41
COL16A1-214ENST00000488128 MINK1Q8N4C8 1332 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-214ENST00000488128 FBLN1P23142 703 aa17.62■□□□□ 0.41
COL16A1-214ENST00000488128 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
COL16A1-214ENST00000488128 SIGLEC1Q9BZZ2 1709 aa17.62■□□□□ 0.41
COL16A1-214ENST00000488128 QRICH2Q9H0J4 1663 aa17.62■□□□□ 0.41
COL16A1-214ENST00000488128 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
COL16A1-214ENST00000488128 PDCL3Q9H2J4 239 aa17.62■□□□□ 0.41
COL16A1-214ENST00000488128 RBM27Q9P2N5 1060 aaKnown RBP17.62■□□□□ 0.41
COL16A1-214ENST00000488128 CIZ1Q9ULV3 898 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-214ENST00000488128 APBB1O00213 710 aa17.61■□□□□ 0.41
COL16A1-214ENST00000488128 MPNDQ8N594 471 aa17.6■□□□□ 0.41
COL16A1-214ENST00000488128 CAMSAP1Q5T5Y3 1602 aa17.6■□□□□ 0.41
COL16A1-214ENST00000488128 NEO1Q92859 1461 aa17.6■□□□□ 0.41
COL16A1-214ENST00000488128 BMP2KLQ5H9B9 411 aa17.59■□□□□ 0.41
COL16A1-214ENST00000488128 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
COL16A1-214ENST00000488128 RBSNQ9H1K0 784 aa17.59■□□□□ 0.41
COL16A1-214ENST00000488128 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
COL16A1-214ENST00000488128 GLI2P10070 1586 aa17.58■□□□□ 0.41
COL16A1-214ENST00000488128 OFD1O75665 1012 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms