RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Dcaf11Q91VU6 549 aa25.68■■□□□ 1.7
Scn1b-203ENSMUST00000211945 TimelessQ9R1X4 1197 aa25.68■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Cypt1Q8CH20 168 aa25.67■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Slc5a4bQ91ZP4 660 aa25.67■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Atp10bB1AWN4 1474 aa25.66■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Mdc1Q5PSV9 1707 aa25.65■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Qtrt2B8ZXI1 415 aa25.64■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Scaf1Q5U4C3 1256 aaKnown RBP25.64■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Ncoa4Q5U4H9 625 aa25.64■■□□□ 1.7
Scn1b-203ENSMUST00000211945 Sall2Q9QX96 1004 aa25.64■■□□□ 1.7
Scn1b-203ENSMUST00000211945 CemipQ8BI06 1361 aa25.64■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Ybx3Q9JKB3 361 aaKnown RBP25.63■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Kif7B7ZNG0 1348 aa25.63■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Abca15E9PWH4 1668 aa25.63■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Gimap6Q8K349 305 aa25.62■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Cypt2Q6P924 180 aa25.61■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Cadps2Q8BYR5 1297 aa25.61■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Zmym3Q9JLM4 1370 aa25.61■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Cdk12Q14AX6 1484 aaKnown RBP25.6■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Znf526Q8BI66 675 aa25.59■■□□□ 1.69
Scn1b-203ENSMUST00000211945 IbtkQ6ZPR6 1352 aaKnown RBP25.59■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Dixdc1Q80Y83 711 aa25.58■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Ubr1O70481 1757 aa25.58■■□□□ 1.69
Scn1b-203ENSMUST00000211945 Fam135bQ9DAI6 1403 aa25.57■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Ncapd2Q8K2Z4 1392 aa25.57■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Nlgn1Q99K10 843 aa25.57■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Bcl9lQ67FY2 1494 aa25.55■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Prdm10Q3UTQ7 1184 aa25.55■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Dennd6aQ8BH65 605 aa25.55■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Hoxb7P09024 217 aa25.54■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Tet3Q8BG87 1668 aa25.54■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Bcl2l12Q9D3J3 255 aa25.53■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Ano8Q6PB70 1060 aa25.53■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Scn7aB1AYL1 1681 aa25.52■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Map2P20357 1828 aa25.52■■□□□ 1.68
Scn1b-203ENSMUST00000211945 Sema6bO54951 886 aa25.51■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Siglec1Q62230 1695 aa25.51■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Slit2Q9R1B9 1521 aa25.5■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Dzip1Q8BMD2 852 aa25.49■■□□□ 1.67
Scn1b-203ENSMUST00000211945 PaskQ8CEE6 1383 aa25.48■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Gm21190A0A0G2JGJ6 266 aa25.47■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Cald1E9QA15 768 aaKnown RBP25.47■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Fnbp4Q6ZQ03 1031 aa25.47■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Nfat5Q9WV30 1534 aa25.46■■□□□ 1.67
Scn1b-203ENSMUST00000211945 Kcnh5Q920E3 988 aa25.45■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Ppp2r1aQ76MZ3 589 aa25.44■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Nckap5lQ6GQX2 1323 aa25.44■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Cntnap1O54991 1385 aa25.44■■□□□ 1.66
Scn1b-203ENSMUST00000211945 ZgpatQ8VDM1 511 aa25.42■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Cabp4Q8VHC5 271 aa25.42■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Rab3gap2Q8BMG7 1366 aa25.42■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Robo1O89026 1612 aa25.42■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Nid2O88322 1403 aa25.42■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Rad17Q6NXW6 688 aa25.42■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Supt5hO55201 1082 aaKnown RBP25.41■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Arhgef1Q61210 920 aaKnown RBP25.41■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Smim5Q8BT42 78 aa25.41■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Lrrc59Q922Q8 307 aaKnown RBP25.41■■□□□ 1.66
Scn1b-203ENSMUST00000211945 PtprvP70289 1705 aa25.4■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Nhsl1Q8CAF4 1587 aa25.4■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Cdhr2E9Q7P9 1308 aa25.39■■□□□ 1.66
Scn1b-203ENSMUST00000211945 Birc3O08863 600 aa25.38■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Trim28Q62318 834 aa25.38■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Ggt6Q6PDE7 497 aa25.38■■□□□ 1.65
Scn1b-203ENSMUST00000211945 FancaQ9JL70 1439 aa25.37■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Tex14Q7M6U3 1450 aa25.37■■□□□ 1.65
Scn1b-203ENSMUST00000211945 MypopQ8R4U1 393 aa25.37■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Acsbg1Q99PU5 721 aa25.36■■□□□ 1.65
Scn1b-203ENSMUST00000211945 TnrQ8BYI9 1358 aa25.35■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Anp32bQ9EST5 272 aaKnown RBP25.35■■□□□ 1.65
Scn1b-203ENSMUST00000211945 HdgfP51859 237 aaKnown RBP25.34■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Card10P58660 1021 aa25.34■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Fmnl2A2APV2 1086 aa25.33■■□□□ 1.65
Scn1b-203ENSMUST00000211945 Dnajc10Q9DC23 793 aa25.33■■□□□ 1.65
Scn1b-203ENSMUST00000211945 TatQ8QZR1 454 aa25.32■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Gm21698A0A087WQP8 267 aa25.32■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Gm21671G3UY31 267 aa25.32■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Wwc2Q6NXJ0 1187 aa25.32■■□□□ 1.64
Scn1b-203ENSMUST00000211945 P2rx7Q9Z1M0 595 aa25.32■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Txnrd1Q9JMH6 613 aa25.31■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Exoc6Q8R313 802 aa25.3■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Dmrt2Q8BG36 561 aa25.29■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Slx1bQ8BX32 270 aa25.29■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Lrp6O88572 1613 aa25.29■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Ppp1r15aP17564 657 aa25.28■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Hoxc9P09633 260 aa25.27■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Amotl2Q8K371 772 aa25.27■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Ddx54Q8K4L0 874 aaKnown RBP25.27■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Rpgrip1lQ8CG73 1264 aa25.27■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Ptpn23Q6PB44 1692 aa25.27■■□□□ 1.64
Scn1b-203ENSMUST00000211945 Pard3Q99NH2 1333 aa25.25■■□□□ 1.63
Scn1b-203ENSMUST00000211945 Q7TT23 1179 aa25.24■■□□□ 1.63
Scn1b-203ENSMUST00000211945 Nol11Q8BJW5 723 aaKnown RBP25.24■■□□□ 1.63
Scn1b-203ENSMUST00000211945 Emilin2Q8K482 1074 aa25.23■■□□□ 1.63
Scn1b-203ENSMUST00000211945 Atf7ipQ7TT18 1306 aa25.23■■□□□ 1.63
Scn1b-203ENSMUST00000211945 PnisrA2AJT4 805 aaKnown RBP25.22■■□□□ 1.63
Scn1b-203ENSMUST00000211945 Tmem132eQ6IEE6 982 aa25.22■■□□□ 1.63
Scn1b-203ENSMUST00000211945 Rtl5Q5DTT4 599 aa25.21■■□□□ 1.63
Scn1b-203ENSMUST00000211945 Uhrf1bp1lA2RSJ4 1457 aa25.2■■□□□ 1.62
Scn1b-203ENSMUST00000211945 Nlrp6Q91WS2 869 aa25.2■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 127 ms