Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Gm25239-201ENSMUST00000174915 86 ntBASIC54.85■■■■■ 6.37
Cntnap1O54991 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC51.27■■■■■ 5.8
Cntnap1O54991 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC50.3■■■■■ 5.64
Cntnap1O54991 Gm24109-201ENSMUST00000175489 103 ntBASIC48.13■■■■■ 5.29
Cntnap1O54991 Gm15042-201ENSMUST00000120212 883 ntBASIC46.86■■■■■ 5.09
Cntnap1O54991 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC46.4■■■■■ 5.02
Cntnap1O54991 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC46.32■■■■■ 5.01
Cntnap1O54991 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC46.17■■■■■ 4.98
Cntnap1O54991 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.8■■■■■ 4.92
Cntnap1O54991 Gm15045-201ENSMUST00000117359 883 ntBASIC45.71■■■■■ 4.91
Cntnap1O54991 Gm23366-201ENSMUST00000175022 89 ntBASIC45.61■■■■■ 4.89
Cntnap1O54991 AC153911.1-202ENSMUST00000218534 1034 ntBASIC45.25■■■■■ 4.83
Cntnap1O54991 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC44.92■■■■■ 4.78
Cntnap1O54991 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC44.86■■■■■ 4.77
Cntnap1O54991 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC44.82■■■■■ 4.76
Cntnap1O54991 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC44.69■■■■■ 4.74
Cntnap1O54991 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.87■■■■■ 4.61
Cntnap1O54991 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.8■■■■■ 4.6
Cntnap1O54991 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC43.7■■■■■ 4.59
Cntnap1O54991 Gm25238-201ENSMUST00000174914 89 ntBASIC43.67■■■■■ 4.58
Cntnap1O54991 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC43.59■■■■■ 4.57
Cntnap1O54991 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43.42■■■■■ 4.54
Cntnap1O54991 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC42.75■■■■■ 4.43
Cntnap1O54991 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC42.7■■■■■ 4.43
Cntnap1O54991 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC42.56■■■■■ 4.4
Cntnap1O54991 Gm25262-201ENSMUST00000174934 133 ntBASIC42.3■■■■■ 4.36
Cntnap1O54991 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC42.06■■■■■ 4.32
Cntnap1O54991 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC41.95■■■■■ 4.31
Cntnap1O54991 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC41.84■■■■■ 4.29
Cntnap1O54991 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.82■■■■■ 4.29
Cntnap1O54991 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.77■■■■■ 4.28
Cntnap1O54991 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC41.73■■■■■ 4.27
Cntnap1O54991 Gm26115-201ENSMUST00000175605 87 ntBASIC41.71■■■■■ 4.27
Cntnap1O54991 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC41.6■■■■■ 4.25
Cntnap1O54991 Gm8109-201ENSMUST00000194076 746 ntBASIC41.39■■■■■ 4.22
Cntnap1O54991 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC41.37■■■■■ 4.21
Cntnap1O54991 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
Cntnap1O54991 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
Cntnap1O54991 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.2
Cntnap1O54991 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Cntnap1O54991 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.18
Cntnap1O54991 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
Cntnap1O54991 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Cntnap1O54991 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.97■■■■■ 4.15
Cntnap1O54991 Gm27325-201ENSMUST00000175467 74 ntBASIC40.86■■■■■ 4.13
Cntnap1O54991 Rab21-202ENSMUST00000218831 843 ntBASIC40.84■■■■■ 4.13
Cntnap1O54991 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.84■■■■■ 4.13
Cntnap1O54991 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.75■■■■■ 4.11
Cntnap1O54991 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC40.75■■■■■ 4.11
Cntnap1O54991 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.64■■■■■ 4.1
Cntnap1O54991 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
Cntnap1O54991 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC40.61■■■■■ 4.09
Cntnap1O54991 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC40.61■■■■■ 4.09
Cntnap1O54991 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC40.4■■■■■ 4.06
Cntnap1O54991 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.35■■■■■ 4.05
Cntnap1O54991 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.32■■■■■ 4.05
Cntnap1O54991 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC40.29■■■■■ 4.04
Cntnap1O54991 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC40.22■■■■■ 4.03
Cntnap1O54991 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Cntnap1O54991 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
Cntnap1O54991 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Cntnap1O54991 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Cntnap1O54991 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Cntnap1O54991 Gm24804-201ENSMUST00000174982 85 ntBASIC39.95■■■■□ 3.99
Cntnap1O54991 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Cntnap1O54991 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
Cntnap1O54991 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Cntnap1O54991 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.74■■■■□ 3.95
Cntnap1O54991 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.58■■■■□ 3.93
Cntnap1O54991 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39.47■■■■□ 3.91
Cntnap1O54991 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.45■■■■□ 3.91
Cntnap1O54991 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39.43■■■■□ 3.9
Cntnap1O54991 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC39.38■■■■□ 3.89
Cntnap1O54991 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC39.37■■■■□ 3.89
Cntnap1O54991 Zfp131-205ENSMUST00000223812 663 ntBASIC39.32■■■■□ 3.88
Cntnap1O54991 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC39.27■■■■□ 3.88
Cntnap1O54991 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
Cntnap1O54991 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC39.22■■■■□ 3.87
Cntnap1O54991 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Cntnap1O54991 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Cntnap1O54991 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC39.18■■■■□ 3.86
Cntnap1O54991 Gm27322-201ENSMUST00000184007 104 ntBASIC39.08■■■■□ 3.85
Cntnap1O54991 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Cntnap1O54991 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Cntnap1O54991 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Cntnap1O54991 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Cntnap1O54991 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Cntnap1O54991 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.02■■■■□ 3.84
Cntnap1O54991 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Cntnap1O54991 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38.97■■■■□ 3.83
Cntnap1O54991 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Cntnap1O54991 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Cntnap1O54991 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38.91■■■■□ 3.82
Cntnap1O54991 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.9■■■■□ 3.82
Cntnap1O54991 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.81■■■■□ 3.8
Cntnap1O54991 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC38.75■■■■□ 3.79
Cntnap1O54991 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC38.74■■■■□ 3.79
Cntnap1O54991 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.7■■■■□ 3.78
Cntnap1O54991 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC38.68■■■■□ 3.78
Cntnap1O54991 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms