Protein–RNA interactions for Protein: Q8BX32

Slx1b, Structure-specific endonuclease subunit SLX1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx1bQ8BX32 Gm25239-201ENSMUST00000174915 86 ntBASIC52.8■■■■■ 6.04
Slx1bQ8BX32 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC49.04■■■■■ 5.44
Slx1bQ8BX32 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC48.29■■■■■ 5.32
Slx1bQ8BX32 Gm24109-201ENSMUST00000175489 103 ntBASIC46.03■■■■■ 4.96
Slx1bQ8BX32 Gm15042-201ENSMUST00000120212 883 ntBASIC45.65■■■■■ 4.9
Slx1bQ8BX32 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC44.66■■■■■ 4.74
Slx1bQ8BX32 Gm15045-201ENSMUST00000117359 883 ntBASIC44.63■■■■■ 4.74
Slx1bQ8BX32 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC44.43■■■■■ 4.7
Slx1bQ8BX32 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC44.43■■■■■ 4.7
Slx1bQ8BX32 Gm23366-201ENSMUST00000175022 89 ntBASIC44.02■■■■■ 4.64
Slx1bQ8BX32 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC43.9■■■■■ 4.62
Slx1bQ8BX32 AC153911.1-202ENSMUST00000218534 1034 ntBASIC43.04■■■■■ 4.48
Slx1bQ8BX32 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC42.71■■■■■ 4.43
Slx1bQ8BX32 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC42.64■■■■■ 4.42
Slx1bQ8BX32 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC42.61■■■■■ 4.41
Slx1bQ8BX32 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC42.58■■■■■ 4.41
Slx1bQ8BX32 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.45■■■■■ 4.39
Slx1bQ8BX32 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC42.29■■■■■ 4.36
Slx1bQ8BX32 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC42.24■■■■■ 4.35
Slx1bQ8BX32 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42.13■■■■■ 4.33
Slx1bQ8BX32 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC42.04■■■■■ 4.32
Slx1bQ8BX32 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC41.92■■■■■ 4.3
Slx1bQ8BX32 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC41.87■■■■■ 4.29
Slx1bQ8BX32 Gm25238-201ENSMUST00000174914 89 ntBASIC41.87■■■■■ 4.29
Slx1bQ8BX32 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.47■■■■■ 4.23
Slx1bQ8BX32 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.21■■■■■ 4.19
Slx1bQ8BX32 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.18
Slx1bQ8BX32 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC41.07■■■■■ 4.17
Slx1bQ8BX32 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41.07■■■■■ 4.16
Slx1bQ8BX32 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.16
Slx1bQ8BX32 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
Slx1bQ8BX32 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
Slx1bQ8BX32 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC40.75■■■■■ 4.11
Slx1bQ8BX32 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.67■■■■■ 4.1
Slx1bQ8BX32 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.65■■■■■ 4.1
Slx1bQ8BX32 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC40.54■■■■■ 4.08
Slx1bQ8BX32 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC40.5■■■■■ 4.07
Slx1bQ8BX32 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.47■■■■■ 4.07
Slx1bQ8BX32 Gm25262-201ENSMUST00000174934 133 ntBASIC40.3■■■■■ 4.04
Slx1bQ8BX32 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Slx1bQ8BX32 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC40.04■■■■■ 4
Slx1bQ8BX32 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Slx1bQ8BX32 Gm27325-201ENSMUST00000175467 74 ntBASIC39.97■■■■□ 3.99
Slx1bQ8BX32 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC39.84■■■■□ 3.97
Slx1bQ8BX32 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Slx1bQ8BX32 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.62■■■■□ 3.93
Slx1bQ8BX32 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.59■■■■□ 3.93
Slx1bQ8BX32 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC39.58■■■■□ 3.93
Slx1bQ8BX32 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC39.56■■■■□ 3.92
Slx1bQ8BX32 Rab21-202ENSMUST00000218831 843 ntBASIC39.55■■■■□ 3.92
Slx1bQ8BX32 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Slx1bQ8BX32 Gm26115-201ENSMUST00000175605 87 ntBASIC39.5■■■■□ 3.91
Slx1bQ8BX32 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC39.48■■■■□ 3.91
Slx1bQ8BX32 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.43■■■■□ 3.9
Slx1bQ8BX32 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
Slx1bQ8BX32 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Slx1bQ8BX32 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
Slx1bQ8BX32 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC39.25■■■■□ 3.87
Slx1bQ8BX32 Gm8109-201ENSMUST00000194076 746 ntBASIC39.19■■■■□ 3.86
Slx1bQ8BX32 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Slx1bQ8BX32 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
Slx1bQ8BX32 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC39.08■■■■□ 3.85
Slx1bQ8BX32 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC39.04■■■■□ 3.84
Slx1bQ8BX32 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC38.99■■■■□ 3.83
Slx1bQ8BX32 Psd-208ENSMUST00000224556 2034 ntBASIC38.84■■■■□ 3.81
Slx1bQ8BX32 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.81■■■■□ 3.8
Slx1bQ8BX32 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC38.75■■■■□ 3.79
Slx1bQ8BX32 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.7■■■■□ 3.79
Slx1bQ8BX32 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
Slx1bQ8BX32 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Slx1bQ8BX32 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC38.62■■■■□ 3.77
Slx1bQ8BX32 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.62■■■■□ 3.77
Slx1bQ8BX32 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
Slx1bQ8BX32 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.43■■■■□ 3.74
Slx1bQ8BX32 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC38.4■■■■□ 3.74
Slx1bQ8BX32 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Slx1bQ8BX32 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Slx1bQ8BX32 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC38.38■■■■□ 3.73
Slx1bQ8BX32 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.35■■■■□ 3.73
Slx1bQ8BX32 Gm17082-201ENSMUST00000166043 1091 ntBASIC38.28■■■■□ 3.72
Slx1bQ8BX32 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC38.26■■■■□ 3.72
Slx1bQ8BX32 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
Slx1bQ8BX32 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Slx1bQ8BX32 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.11■■■■□ 3.69
Slx1bQ8BX32 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Slx1bQ8BX32 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Slx1bQ8BX32 Gm24804-201ENSMUST00000174982 85 ntBASIC37.97■■■■□ 3.67
Slx1bQ8BX32 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC37.93■■■■□ 3.66
Slx1bQ8BX32 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Slx1bQ8BX32 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC37.89■■■■□ 3.66
Slx1bQ8BX32 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC37.88■■■■□ 3.66
Slx1bQ8BX32 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC37.88■■■■□ 3.65
Slx1bQ8BX32 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC37.84■■■■□ 3.65
Slx1bQ8BX32 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37.81■■■■□ 3.64
Slx1bQ8BX32 Gm27322-201ENSMUST00000184007 104 ntBASIC37.8■■■■□ 3.64
Slx1bQ8BX32 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
Slx1bQ8BX32 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC37.7■■■■□ 3.63
Slx1bQ8BX32 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
Slx1bQ8BX32 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC37.63■■■■□ 3.61
Slx1bQ8BX32 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC37.63■■■■□ 3.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms