RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C PEP7P32609 515 aa3.05□□□□□ -1.92
AFI1YOR129C SSN3P39073 555 aa3.05□□□□□ -1.92
AFI1YOR129C RGD2P43556 714 aa3.05□□□□□ -1.92
AFI1YOR129C CLA4P48562 842 aa3.05□□□□□ -1.92
AFI1YOR129C SAM37P50110 327 aa3.05□□□□□ -1.92
AFI1YOR129C YGR122WP53272 402 aa3.05□□□□□ -1.92
AFI1YOR129C BSC2Q05611 235 aa3.05□□□□□ -1.92
AFI1YOR129C RPS31P05759 152 aaKnown RBP3.04□□□□□ -1.92
AFI1YOR129C MSN1P22148 382 aa3.04□□□□□ -1.92
AFI1YOR129C FAA3P39002 694 aa3.04□□□□□ -1.92
AFI1YOR129C HED1Q03937 162 aa3.04□□□□□ -1.92
AFI1YOR129C NOC3Q07896 663 aaPredicted RBP3.04□□□□□ -1.92
AFI1YOR129C MET32Q12041 191 aa3.04□□□□□ -1.92
AFI1YOR129C YOL098CQ12496 1037 aa3.04□□□□□ -1.92
AFI1YOR129C RPP2BP02400 110 aaKnown RBP3.04□□□□□ -1.92
AFI1YOR129C HXK1P04806 485 aaKnown RBP3.04□□□□□ -1.92
AFI1YOR129C NAB2P32505 525 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
AFI1YOR129C SMC1P32908 1225 aa3.04□□□□□ -1.92
AFI1YOR129C SPC42P36094 363 aa3.04□□□□□ -1.92
AFI1YOR129C LDH1P38139 375 aa3.04□□□□□ -1.92
AFI1YOR129C DLD3P39976 496 aaKnown RBP3.04□□□□□ -1.92
AFI1YOR129C QDR2P40474 542 aa3.04□□□□□ -1.92
AFI1YOR129C MAD1P40957 749 aa3.04□□□□□ -1.92
AFI1YOR129C UTP4Q06679 776 aaKnown RBP3.04□□□□□ -1.92
AFI1YOR129C TIF6Q12522 245 aaKnown RBP3.04□□□□□ -1.92
AFI1YOR129C SHM1P37292 490 aaPredicted RBP3.03□□□□□ -1.92
AFI1YOR129C RAD55P38953 406 aa3.03□□□□□ -1.92
AFI1YOR129C IOC3P43596 787 aa3.03□□□□□ -1.92
AFI1YOR129C MTO1P53070 669 aa3.03□□□□□ -1.92
AFI1YOR129C RMD1Q03441 430 aa3.03□□□□□ -1.92
AFI1YOR129C INP54Q08227 384 aaKnown RBP3.03□□□□□ -1.92
AFI1YOR129C SSF2Q12153 453 aaPredicted RBP3.03□□□□□ -1.92
AFI1YOR129C RAD2P07276 1031 aa3.03□□□□□ -1.92
AFI1YOR129C DYS1P38791 387 aa3.03□□□□□ -1.92
AFI1YOR129C NTA1P40354 457 aa3.03□□□□□ -1.92
AFI1YOR129C ALA1P40825 983 aaKnown RBP3.03□□□□□ -1.92
AFI1YOR129C FPR4Q06205 392 aaPredicted RBP3.03□□□□□ -1.92
AFI1YOR129C OXR1Q08952 273 aa3.03□□□□□ -1.92
AFI1YOR129C CTR9P89105 1077 aa3.02□□□□□ -1.93
AFI1YOR129C ESF1Q06344 628 aaKnown RBP3.02□□□□□ -1.93
AFI1YOR129C UGA4P32837 571 aa3.02□□□□□ -1.93
AFI1YOR129C PET112P33893 541 aa3.02□□□□□ -1.93
AFI1YOR129C BRN1P38170 754 aa3.02□□□□□ -1.93
AFI1YOR129C BSD2P38356 321 aa3.02□□□□□ -1.93
AFI1YOR129C CIC1P38779 376 aaKnown RBP3.02□□□□□ -1.93
AFI1YOR129C PSY2P40164 858 aa3.02□□□□□ -1.93
AFI1YOR129C JJJ2P46997 583 aa3.02□□□□□ -1.93
AFI1YOR129C DAL4Q04895 635 aa3.02□□□□□ -1.93
AFI1YOR129C RPC31P17890 251 aa3.01□□□□□ -1.93
AFI1YOR129C IRS4P36115 615 aaKnown RBP3.01□□□□□ -1.93
AFI1YOR129C FIR1P40020 876 aa3.01□□□□□ -1.93
AFI1YOR129C RTT106P40161 455 aa3.01□□□□□ -1.93
AFI1YOR129C TY1A-DR3Q12441 440 aa3.01□□□□□ -1.93
AFI1YOR129C CLN2P20438 545 aa3.01□□□□□ -1.93
AFI1YOR129C AIR1P40507 360 aaKnown RBP3.01□□□□□ -1.93
AFI1YOR129C MSN5P52918 1224 aa3.01□□□□□ -1.93
AFI1YOR129C RNH70P53331 553 aa3.01□□□□□ -1.93
AFI1YOR129C DOS2P54858 310 aa3.01□□□□□ -1.93
AFI1YOR129C COBP00163 385 aa3□□□□□ -1.93
AFI1YOR129C AMS1P22855 1083 aa3□□□□□ -1.93
AFI1YOR129C SRP40P32583 406 aaPredicted RBP3□□□□□ -1.93
AFI1YOR129C KAP122P32767 1081 aa3□□□□□ -1.93
AFI1YOR129C SLA1P32790 1244 aa3□□□□□ -1.93
AFI1YOR129C MNR2P35724 969 aa3□□□□□ -1.93
AFI1YOR129C MNN4P36044 1178 aa3□□□□□ -1.93
AFI1YOR129C YHL008CP38750 627 aa3□□□□□ -1.93
AFI1YOR129C TAT2P38967 592 aa3□□□□□ -1.93
AFI1YOR129C YAF9P53930 226 aa3□□□□□ -1.93
AFI1YOR129C YCS4Q06156 1176 aa3□□□□□ -1.93
AFI1YOR129C WRS1Q12109 432 aaKnown RBP3□□□□□ -1.93
AFI1YOR129C FLP1P03870 423 aa3□□□□□ -1.93
AFI1YOR129C PRE9P23638 258 aaKnown RBP3□□□□□ -1.93
AFI1YOR129C UGA3P26370 528 aa3□□□□□ -1.93
AFI1YOR129C IRE1P32361 1115 aa3□□□□□ -1.93
AFI1YOR129C DUR3P33413 735 aa3□□□□□ -1.93
AFI1YOR129C ISW1P38144 1129 aa3□□□□□ -1.93
AFI1YOR129C GIP1P38229 639 aa3□□□□□ -1.93
AFI1YOR129C AAD14P42884 376 aa3□□□□□ -1.93
AFI1YOR129C MSB3P48566 633 aaPredicted RBP3□□□□□ -1.93
AFI1YOR129C EMG1Q06287 252 aaKnown RBP3□□□□□ -1.93
AFI1YOR129C RAS1P01119 309 aa2.99□□□□□ -1.93
AFI1YOR129C CIT2P08679 460 aa2.99□□□□□ -1.93
AFI1YOR129C PRP40P33203 583 aaKnown RBP2.99□□□□□ -1.93
AFI1YOR129C NMD2P38798 1089 aaKnown RBP2.99□□□□□ -1.93
AFI1YOR129C DUT1P33317 147 aa2.99□□□□□ -1.93
AFI1YOR129C MRPS18P42847 217 aa2.99□□□□□ -1.93
AFI1YOR129C FAA4P47912 694 aaKnown RBP2.99□□□□□ -1.93
AFI1YOR129C CWC24P53769 259 aa2.99□□□□□ -1.93
AFI1YOR129C NSE3Q05541 303 aa2.99□□□□□ -1.93
AFI1YOR129C YOR296WQ08748 1289 aa2.99□□□□□ -1.93
AFI1YOR129C PSH1Q12161 406 aa2.99□□□□□ -1.93
AFI1YOR129C GRX1P25373 110 aaKnown RBP2.98□□□□□ -1.93
AFI1YOR129C MCM5P29496 775 aaKnown RBP2.98□□□□□ -1.93
AFI1YOR129C DLD1P32891 587 aa2.98□□□□□ -1.93
AFI1YOR129C PIC2P40035 300 aa2.98□□□□□ -1.93
AFI1YOR129C BUD6P41697 788 aa2.98□□□□□ -1.93
AFI1YOR129C ULP1Q02724 621 aa2.98□□□□□ -1.93
AFI1YOR129C GDE1Q02979 1223 aa2.98□□□□□ -1.93
AFI1YOR129C MCD1Q12158 566 aa2.98□□□□□ -1.93
AFI1YOR129C CDC34P14682 295 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms