RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C CTI6Q08923 506 aa10.72□□□□□ -0.69
SPT20YOL148C PUS1Q12211 544 aaKnown RBP10.72□□□□□ -0.69
SPT20YOL148C ECM21P38167 1117 aaKnown RBP10.72□□□□□ -0.69
SPT20YOL148C FYV10P40492 516 aa10.72□□□□□ -0.69
SPT20YOL148C YPT11P48559 417 aa10.72□□□□□ -0.69
SPT20YOL148C DOS2P54858 310 aa10.72□□□□□ -0.69
SPT20YOL148C VMS1Q04311 632 aaKnown RBP10.72□□□□□ -0.69
SPT20YOL148C OMS1Q06668 471 aa10.72□□□□□ -0.69
SPT20YOL148C NCB2Q92317 146 aa10.72□□□□□ -0.69
SPT20YOL148C GSY2P27472 705 aa10.71□□□□□ -0.69
SPT20YOL148C CTK3P46963 296 aaPredicted RBP10.71□□□□□ -0.69
SPT20YOL148C PDR18P53756 1333 aa10.71□□□□□ -0.7
SPT20YOL148C MRP7P12687 371 aa10.7□□□□□ -0.7
SPT20YOL148C NOC2P39744 710 aaKnown RBP10.7□□□□□ -0.7
SPT20YOL148C APT1P49435 187 aaKnown RBP10.7□□□□□ -0.7
SPT20YOL148C PRP43P53131 767 aaKnown RBP10.7□□□□□ -0.7
SPT20YOL148C YPL225WQ08971 146 aaKnown RBP10.7□□□□□ -0.7
SPT20YOL148C SEC39Q12745 709 aa10.7□□□□□ -0.7
SPT20YOL148C DPB3P27344 201 aa10.7□□□□□ -0.7
SPT20YOL148C SAP190P36123 1033 aa10.7□□□□□ -0.7
SPT20YOL148C MAL33P38157 468 aa10.7□□□□□ -0.7
SPT20YOL148C CCT4P39078 528 aaKnown RBP10.7□□□□□ -0.7
SPT20YOL148C CAJ1P39101 391 aa10.7□□□□□ -0.7
SPT20YOL148C RIO2P40160 425 aaKnown RBP10.7□□□□□ -0.7
SPT20YOL148C VPS4P52917 437 aa10.7□□□□□ -0.7
SPT20YOL148C YGL242CP53066 181 aa10.7□□□□□ -0.7
SPT20YOL148C MCM16Q12262 181 aa10.7□□□□□ -0.7
SPT20YOL148C UBC1P21734 215 aaKnown RBP10.69□□□□□ -0.7
SPT20YOL148C CBF5P33322 483 aaKnown RBP RIP-Chip data10.69□□□□□ -0.7not detected
SPT20YOL148C PCH2P38126 564 aa10.69□□□□□ -0.7
SPT20YOL148C RGD1P38339 666 aa10.69□□□□□ -0.7
SPT20YOL148C REI1P38344 393 aaPredicted RBP10.69□□□□□ -0.7
SPT20YOL148C NSE3Q05541 303 aa10.69□□□□□ -0.7
SPT20YOL148C AOS1Q06624 347 aa10.69□□□□□ -0.7
SPT20YOL148C SWC3P31376 625 aa10.68□□□□□ -0.7
SPT20YOL148C YOL057WQ08225 711 aa10.68□□□□□ -0.7
SPT20YOL148C SRP40P32583 406 aaPredicted RBP10.68□□□□□ -0.7
SPT20YOL148C YHL017WP38745 532 aa10.68□□□□□ -0.7
SPT20YOL148C NDC80P40460 691 aa10.68□□□□□ -0.7
SPT20YOL148C MAL13P53338 473 aa10.68□□□□□ -0.7
SPT20YOL148C VPS75P53853 264 aa10.68□□□□□ -0.7
SPT20YOL148C APL4Q12028 832 aa10.68□□□□□ -0.7
SPT20YOL148C RPO26P20435 155 aa10.67□□□□□ -0.7
SPT20YOL148C CDC15P27636 974 aa10.67□□□□□ -0.7
SPT20YOL148C TAN1P53072 289 aaPredicted RBP10.67□□□□□ -0.7
SPT20YOL148C YNL035CP53962 389 aaKnown RBP10.67□□□□□ -0.7
SPT20YOL148C YNL011CP53980 444 aa10.67□□□□□ -0.7
SPT20YOL148C YRF1-2P40105 1681 aa10.66□□□□□ -0.7
SPT20YOL148C YEL043WP32618 956 aa10.66□□□□□ -0.7
SPT20YOL148C YKT6P36015 200 aaKnown RBP10.66□□□□□ -0.7
SPT20YOL148C MRPS35P53292 345 aa10.66□□□□□ -0.7
SPT20YOL148C HSP82P02829 709 aaKnown RBP10.65□□□□□ -0.7
SPT20YOL148C UGA3P26370 528 aa10.65□□□□□ -0.7
SPT20YOL148C MUD2P36084 527 aaKnown RBP10.65□□□□□ -0.7
SPT20YOL148C RUD3Q12234 484 aaKnown RBP10.65□□□□□ -0.7
SPT20YOL148C TFC8Q12308 588 aa10.65□□□□□ -0.7
SPT20YOL148C ATG9Q12142 997 aa10.65□□□□□ -0.71
SPT20YOL148C ARD1P07347 238 aaPredicted RBP10.64□□□□□ -0.71
SPT20YOL148C RFC5P38251 354 aa10.64□□□□□ -0.71
SPT20YOL148C SPT8P38915 602 aa10.64□□□□□ -0.71
SPT20YOL148C STR2P47164 639 aa10.64□□□□□ -0.71
SPT20YOL148C MLC1P53141 149 aa10.64□□□□□ -0.71
SPT20YOL148C RAD3P06839 778 aa10.63□□□□□ -0.71
SPT20YOL148C ZUO1P32527 433 aaKnown RBP10.63□□□□□ -0.71
SPT20YOL148C RFT1P38206 574 aaPredicted RBP10.63□□□□□ -0.71
SPT20YOL148C VID28P40547 921 aa10.63□□□□□ -0.71
SPT20YOL148C NNF2P53253 936 aa10.63□□□□□ -0.71
SPT20YOL148C CAF130P53280 1122 aaPredicted RBP10.63□□□□□ -0.71
SPT20YOL148C ALF1P53904 254 aa10.63□□□□□ -0.71
SPT20YOL148C YDR306CQ06640 478 aa10.63□□□□□ -0.71
SPT20YOL148C ATG23Q06671 453 aa10.63□□□□□ -0.71
SPT20YOL148C RAD4P14736 754 aa10.62□□□□□ -0.71
SPT20YOL148C YKE2P52553 114 aa10.62□□□□□ -0.71
SPT20YOL148C CTF4Q01454 927 aa10.62□□□□□ -0.71
SPT20YOL148C RRP43P25359 394 aaPredicted RBP10.61□□□□□ -0.71
SPT20YOL148C KTR1P27810 393 aaKnown RBP10.61□□□□□ -0.71
SPT20YOL148C SSF1P38789 453 aaPredicted RBP10.61□□□□□ -0.71
SPT20YOL148C SAP1P39955 897 aaKnown RBP10.61□□□□□ -0.71
SPT20YOL148C VPS30Q02948 557 aa10.61□□□□□ -0.71
SPT20YOL148C STO1P34160 861 aaKnown RBP10.61□□□□□ -0.71
SPT20YOL148C PSY4P38193 441 aa10.61□□□□□ -0.71
SPT20YOL148C STM1P39015 273 aaKnown RBP10.61□□□□□ -0.71
SPT20YOL148C BUD6P41697 788 aa10.61□□□□□ -0.71
SPT20YOL148C MDM38Q08179 573 aa10.61□□□□□ -0.71
SPT20YOL148C SPT5P27692 1063 aaKnown RBP10.6□□□□□ -0.71
SPT20YOL148C VPS38Q05919 439 aa10.6□□□□□ -0.71
SPT20YOL148C PLP2Q12017 286 aa10.6□□□□□ -0.71
SPT20YOL148C PDC1P06169 563 aaKnown RBP10.59□□□□□ -0.71
SPT20YOL148C PHO13P19881 312 aa10.59□□□□□ -0.71
SPT20YOL148C URB1P34241 1764 aaKnown RBP10.59□□□□□ -0.71
SPT20YOL148C NFU1P32860 256 aa10.58□□□□□ -0.72
SPT20YOL148C HUL4P40985 892 aa10.58□□□□□ -0.72
SPT20YOL148C ALO1P54783 526 aaKnown RBP10.58□□□□□ -0.72
SPT20YOL148C OSH2Q12451 1283 aa10.58□□□□□ -0.72
SPT20YOL148C TOP1P04786 769 aa10.58□□□□□ -0.72
SPT20YOL148C MATALPHA2P0CY08 210 aa10.58□□□□□ -0.72
SPT20YOL148C HMLALPHA2P0CY09 210 aa10.58□□□□□ -0.72
SPT20YOL148C ECM32P32644 1121 aaKnown RBP10.58□□□□□ -0.72
SPT20YOL148C SEC9P40357 651 aa10.58□□□□□ -0.72
SPT20YOL148C PGI1P12709 554 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms