RNA–Protein interactions for RNA: YOL071W

SDH5, Transcript of Protein required for flavinylation of Sdh1p, yeast

Gene SDH5, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH5	YOL071W	GYP5	Q12344	894 aa		11.87	□□□□□ -0.51
SDH5	YOL071W	YIL089W	P40500	205 aa		11.86	□□□□□ -0.51
SDH5	YOL071W	AIM7	Q12156	149 aa		11.86	□□□□□ -0.51
SDH5	YOL071W	DAL5	P15365	543 aa		11.85	□□□□□ -0.51
SDH5	YOL071W	CWC15	Q03772	175 aa	Known RBP	11.85	□□□□□ -0.51
SDH5	YOL071W	PIF1	P07271	859 aa		11.84	□□□□□ -0.51
SDH5	YOL071W	HPR1	P17629	752 aa	Known RBP	11.84	□□□□□ -0.51
SDH5	YOL071W	STV1	P37296	890 aa		11.84	□□□□□ -0.51
SDH5	YOL071W	YNG2	P38806	282 aa	Known RBP	11.84	□□□□□ -0.51
SDH5	YOL071W	JJJ2	P46997	583 aa		11.84	□□□□□ -0.51
SDH5	YOL071W	VPS4	P52917	437 aa		11.84	□□□□□ -0.51
SDH5	YOL071W	GLO3	P38682	493 aa	Known RBP	11.83	□□□□□ -0.52
SDH5	YOL071W	YJL171C	P46992	396 aa		11.82	□□□□□ -0.52
SDH5	YOL071W	UTP7	P40055	554 aa	Known RBP	11.81	□□□□□ -0.52
SDH5	YOL071W	GSM1	P42950	618 aa		11.81	□□□□□ -0.52
SDH5	YOL071W	TOS4	Q06266	489 aa		11.81	□□□□□ -0.52
SDH5	YOL071W	SEC18	P18759	758 aa	Known RBP	11.8	□□□□□ -0.52
SDH5	YOL071W	YFH7	P43591	353 aa		11.8	□□□□□ -0.52
SDH5	YOL071W	RRT6	P53117	311 aa	Predicted RBP	11.8	□□□□□ -0.52
SDH5	YOL071W	SPO1	P53541	631 aa		11.8	□□□□□ -0.52
SDH5	YOL071W	SEN54	Q02825	467 aa	Predicted RBP	11.8	□□□□□ -0.52
SDH5	YOL071W	RPS7A	P26786	190 aa	Known RBP	11.79	□□□□□ -0.52
SDH5	YOL071W	AAD16	Q02895	342 aa		11.79	□□□□□ -0.52
SDH5	YOL071W	MTC3	P53077	123 aa		11.78	□□□□□ -0.52
SDH5	YOL071W	NCB2	Q92317	146 aa		11.78	□□□□□ -0.52
SDH5	YOL071W	BSD2	P38356	321 aa		11.77	□□□□□ -0.53
SDH5	YOL071W	TOM1	Q03280	3268 aa		11.77	□□□□□ -0.53
SDH5	YOL071W	HAL5	P38970	855 aa	Known RBP	11.76	□□□□□ -0.53
SDH5	YOL071W	DUS1	P53759	423 aa	Known RBP	11.76	□□□□□ -0.53
SDH5	YOL071W	FLO1	P32768	1537 aa		11.76	□□□□□ -0.53
SDH5	YOL071W	CBP1	P07252	654 aa		11.75	□□□□□ -0.53
SDH5	YOL071W	SNF3	P10870	884 aa		11.75	□□□□□ -0.53
SDH5	YOL071W	PUS6	P53294	404 aa		11.75	□□□□□ -0.53
SDH5	YOL071W	CYB2	P00175	591 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	GAL2	P13181	574 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	NPL4	P33755	580 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	GEF1	P37020	779 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	NIT1	P40447	199 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	APL6	P46682	809 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	RRI2	Q12348	645 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	CSR2	Q12734	1121 aa		11.74	□□□□□ -0.53
SDH5	YOL071W	HVG1	P0CE11	249 aa		11.73	□□□□□ -0.53
SDH5	YOL071W	POL32	P47110	350 aa		11.73	□□□□□ -0.53
SDH5	YOL071W	SRF1	Q12516	437 aa		11.73	□□□□□ -0.53
SDH5	YOL071W	AI2	P03876	854 aa		11.72	□□□□□ -0.53
SDH5	YOL071W	YNL193W	P53870	558 aa		11.72	□□□□□ -0.53
SDH5	YOL071W	TIF6	Q12522	245 aa	Known RBP	11.72	□□□□□ -0.53
SDH5	YOL071W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.71	□□□□□ -0.53	not detected
SDH5	YOL071W	ILV3	P39522	585 aa	Known RBP	11.71	□□□□□ -0.53
SDH5	YOL071W	PUF6	Q04373	656 aa	Known RBP	11.71	□□□□□ -0.53
SDH5	YOL071W	CST9	Q06032	482 aa		11.71	□□□□□ -0.53
SDH5	YOL071W	RPN7	Q06103	429 aa	Known RBP	11.71	□□□□□ -0.53
SDH5	YOL071W	SLA1	P32790	1244 aa		11.7	□□□□□ -0.54
SDH5	YOL071W	RPT3	P33298	428 aa	Known RBP	11.7	□□□□□ -0.54
SDH5	YOL071W	PTK1	P36002	662 aa	Predicted RBP	11.7	□□□□□ -0.54
SDH5	YOL071W	YGL242C	P53066	181 aa		11.7	□□□□□ -0.54
SDH5	YOL071W	INM2	Q05533	292 aa		11.7	□□□□□ -0.54
SDH5	YOL071W	NOP2	P40991	618 aa	Known RBP	11.69	□□□□□ -0.54
SDH5	YOL071W	MLC1	P53141	149 aa		11.69	□□□□□ -0.54
SDH5	YOL071W	YIR042C	P40586	236 aa		11.68	□□□□□ -0.54
SDH5	YOL071W	MSH4	P40965	878 aa	Predicted RBP	11.68	□□□□□ -0.54
SDH5	YOL071W	RSC30	P38781	883 aa		11.67	□□□□□ -0.54
SDH5	YOL071W	NMD2	P38798	1089 aa	Known RBP	11.67	□□□□□ -0.54
SDH5	YOL071W	NOT3	P06102	836 aa	Known RBP	11.66	□□□□□ -0.54
SDH5	YOL071W	MDL2	P33311	773 aa		11.66	□□□□□ -0.54
SDH5	YOL071W	BOI1	P38041	980 aa	Known RBP	11.66	□□□□□ -0.54
SDH5	YOL071W	PCL8	Q08966	492 aa		11.66	□□□□□ -0.54
SDH5	YOL071W	RAD53	P22216	821 aa		11.65	□□□□□ -0.54
SDH5	YOL071W	TFA1	P36100	482 aa		11.65	□□□□□ -0.54
SDH5	YOL071W	KTR3	P38130	404 aa	Predicted RBP	11.65	□□□□□ -0.54
SDH5	YOL071W	CDC16	P09798	840 aa		11.64	□□□□□ -0.55
SDH5	YOL071W	MOT2	P34909	587 aa	Known RBP	11.64	□□□□□ -0.55
SDH5	YOL071W	ECM21	P38167	1117 aa	Known RBP	11.64	□□□□□ -0.55
SDH5	YOL071W	RBA50	Q04418	439 aa		11.64	□□□□□ -0.55
SDH5	YOL071W	PDR18	P53756	1333 aa		11.63	□□□□□ -0.55
SDH5	YOL071W	TPS3	P38426	1054 aa	Known RBP	11.63	□□□□□ -0.55
SDH5	YOL071W	OSH3	P38713	996 aa	Known RBP	11.63	□□□□□ -0.55
SDH5	YOL071W	PNT1	P38969	423 aa		11.63	□□□□□ -0.55
SDH5	YOL071W	PIP2	P52960	996 aa		11.63	□□□□□ -0.55
SDH5	YOL071W	ADP1	P25371	1049 aa		11.62	□□□□□ -0.55
SDH5	YOL071W	APE3	P37302	537 aa	Known RBP	11.62	□□□□□ -0.55
SDH5	YOL071W	EPS1	P40557	701 aa		11.62	□□□□□ -0.55
SDH5	YOL071W	IOC3	P43596	787 aa		11.62	□□□□□ -0.55
SDH5	YOL071W	ALO1	P54783	526 aa	Known RBP	11.62	□□□□□ -0.55
SDH5	YOL071W	GIN4	Q12263	1142 aa		11.62	□□□□□ -0.55
SDH5	YOL071W	GRX7	P38068	203 aa		11.61	□□□□□ -0.55
SDH5	YOL071W	KEL1	P38853	1164 aa	Known RBP	11.61	□□□□□ -0.55
SDH5	YOL071W	SNU71	P53207	620 aa	Known RBP	11.61	□□□□□ -0.55
SDH5	YOL071W	ECM16	Q04217	1267 aa	Known RBP	11.61	□□□□□ -0.55
SDH5	YOL071W	PPM2	Q08282	695 aa		11.61	□□□□□ -0.55
SDH5	YOL071W	PMA1	P05030	918 aa	Known RBP	11.6	□□□□□ -0.55
SDH5	YOL071W	KIN1	P13185	1064 aa		11.6	□□□□□ -0.55
SDH5	YOL071W	BDP1	P46678	594 aa		11.6	□□□□□ -0.55
SDH5	YOL071W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.58	□□□□□ -0.56	not detected
SDH5	YOL071W	IRC8	P47046	822 aa		11.58	□□□□□ -0.56
SDH5	YOL071W	ENP2	P48234	707 aa	Known RBP	11.58	□□□□□ -0.56
SDH5	YOL071W	NCS6	P53088	359 aa		11.58	□□□□□ -0.56
SDH5	YOL071W	NSG2	P53898	299 aa		11.58	□□□□□ -0.56
SDH5	YOL071W	FUN12	P39730	1002 aa	Known RBP	11.57	□□□□□ -0.56
SDH5	YOL071W	KAR5	Q04746	504 aa		11.57	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms