RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C IRE1P32361 1115 aa6.86□□□□□ -1.31
CUS1YMR240C KAP122P32767 1081 aa6.86□□□□□ -1.31
CUS1YMR240C SHM1P37292 490 aaPredicted RBP6.86□□□□□ -1.31
CUS1YMR240C AHP1P38013 176 aaKnown RBP6.86□□□□□ -1.31
CUS1YMR240C NUP85P46673 744 aa6.86□□□□□ -1.31
CUS1YMR240C YJR115WP47152 169 aa6.86□□□□□ -1.31
CUS1YMR240C RSC4Q02206 625 aa6.86□□□□□ -1.31
CUS1YMR240C OYE2Q03558 400 aaKnown RBP6.86□□□□□ -1.31
CUS1YMR240C GCD6P32501 712 aaKnown RBP6.85□□□□□ -1.31
CUS1YMR240C SLA1P32790 1244 aa6.85□□□□□ -1.31
CUS1YMR240C SAM37P50110 327 aa6.85□□□□□ -1.31
CUS1YMR240C DLD1P32891 587 aa6.84□□□□□ -1.31
CUS1YMR240C VPS35P34110 944 aa6.84□□□□□ -1.31
CUS1YMR240C FIR1P40020 876 aa6.84□□□□□ -1.31
CUS1YMR240C NTA1P40354 457 aa6.84□□□□□ -1.31
CUS1YMR240C MSN1P22148 382 aa6.83□□□□□ -1.32
CUS1YMR240C RAD55P38953 406 aa6.83□□□□□ -1.32
CUS1YMR240C YJR098CP47139 656 aa6.83□□□□□ -1.32
CUS1YMR240C LSC2P53312 427 aa6.83□□□□□ -1.32
CUS1YMR240C TY1A-DR3Q12441 440 aa6.83□□□□□ -1.32
CUS1YMR240C YBR287WP38355 427 aa6.82□□□□□ -1.32
CUS1YMR240C RGA1P39083 1007 aa6.82□□□□□ -1.32
CUS1YMR240C DAK2P43550 591 aa6.82□□□□□ -1.32
CUS1YMR240C RGD2P43556 714 aa6.82□□□□□ -1.32
CUS1YMR240C LEU1P07264 779 aaKnown RBP6.81□□□□□ -1.32
CUS1YMR240C RPC31P17890 251 aa6.81□□□□□ -1.32
CUS1YMR240C PDC6P26263 563 aaKnown RBP6.81□□□□□ -1.32
CUS1YMR240C RPT1P33299 467 aaKnown RBP6.81□□□□□ -1.32
CUS1YMR240C IRS4P36115 615 aaKnown RBP6.81□□□□□ -1.32
CUS1YMR240C MET1P36150 593 aa6.81□□□□□ -1.32
CUS1YMR240C ISW1P38144 1129 aa6.8□□□□□ -1.32
CUS1YMR240C GIP1P38229 639 aa6.8□□□□□ -1.32
CUS1YMR240C CIC1P38779 376 aaKnown RBP6.8□□□□□ -1.32
CUS1YMR240C MTO1P53070 669 aa6.8□□□□□ -1.32
CUS1YMR240C BSC2Q05611 235 aa6.8□□□□□ -1.32
CUS1YMR240C YOR296WQ08748 1289 aa6.8□□□□□ -1.32
CUS1YMR240C PSH1Q12161 406 aa6.8□□□□□ -1.32
CUS1YMR240C NAP1P25293 417 aaKnown RBP6.79□□□□□ -1.32
CUS1YMR240C PSY2P40164 858 aa6.79□□□□□ -1.32
CUS1YMR240C FYV10P40492 516 aa6.79□□□□□ -1.32
CUS1YMR240C ORC1P54784 914 aaPredicted RBP6.79□□□□□ -1.32
CUS1YMR240C NOC3Q07896 663 aaPredicted RBP6.79□□□□□ -1.32
CUS1YMR240C TIF6Q12522 245 aaKnown RBP6.79□□□□□ -1.32
CUS1YMR240C SKP1P52286 194 aa6.78□□□□□ -1.32
CUS1YMR240C RMD1Q03441 430 aa6.78□□□□□ -1.32
CUS1YMR240C UBP15P50101 1230 aa6.77□□□□□ -1.32
CUS1YMR240C OXR1Q08952 273 aa6.77□□□□□ -1.32
CUS1YMR240C TCB1Q12466 1186 aa6.77□□□□□ -1.32
CUS1YMR240C TRK1P12685 1235 aa6.76□□□□□ -1.33
CUS1YMR240C MCM2P29469 868 aa6.76□□□□□ -1.33
CUS1YMR240C BSD2P38356 321 aa6.76□□□□□ -1.33
CUS1YMR240C AIM44Q99299 758 aa6.76□□□□□ -1.33
CUS1YMR240C RGP1P16664 663 aa6.76□□□□□ -1.33
CUS1YMR240C NAB2P32505 525 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
CUS1YMR240C YGR122WP53272 402 aa6.76□□□□□ -1.33
CUS1YMR240C UBP2Q01476 1272 aa6.76□□□□□ -1.33
CUS1YMR240C AIM46P38885 310 aa6.75□□□□□ -1.33
CUS1YMR240C CUS1Q02554 436 aaPredicted RBP6.75□□□□□ -1.33
CUS1YMR240C YLR346CQ06139 101 aa6.75□□□□□ -1.33
CUS1YMR240C CDC19P00549 500 aaKnown RBP6.74□□□□□ -1.33
CUS1YMR240C SPR28Q04921 423 aa6.74□□□□□ -1.33
CUS1YMR240C JIP5Q06214 492 aaPredicted RBP6.74□□□□□ -1.33
CUS1YMR240C FLP1P03870 423 aa6.73□□□□□ -1.33
CUS1YMR240C RPS26AP39938 119 aaKnown RBP6.73□□□□□ -1.33
CUS1YMR240C RPS26BP39939 119 aaKnown RBP6.73□□□□□ -1.33
CUS1YMR240C YCS4Q06156 1176 aa6.73□□□□□ -1.33
CUS1YMR240C EMG1Q06287 252 aaKnown RBP6.73□□□□□ -1.33
CUS1YMR240C ESF1Q06344 628 aaKnown RBP6.73□□□□□ -1.33
CUS1YMR240C INP54Q08227 384 aaKnown RBP6.73□□□□□ -1.33
CUS1YMR240C HXK1P04806 485 aaKnown RBP6.72□□□□□ -1.33
CUS1YMR240C CYC8P14922 966 aa6.72□□□□□ -1.33
CUS1YMR240C APM2P38700 605 aa6.72□□□□□ -1.33
CUS1YMR240C YHL008CP38750 627 aa6.72□□□□□ -1.33
CUS1YMR240C YIL165CP40446 119 aa6.72□□□□□ -1.33
CUS1YMR240C ITC1P53125 1264 aa6.72□□□□□ -1.33
CUS1YMR240C GCR2Q01722 534 aa6.72□□□□□ -1.33
CUS1YMR240C RPP1AP05318 106 aaPredicted RBP6.71□□□□□ -1.34
CUS1YMR240C GLY1P37303 387 aaKnown RBP6.71□□□□□ -1.34
CUS1YMR240C BRE2P43132 505 aa6.71□□□□□ -1.34
CUS1YMR240C TOS4Q06266 489 aa6.71□□□□□ -1.34
CUS1YMR240C OPT2Q06593 877 aa6.71□□□□□ -1.34
CUS1YMR240C RAD2P07276 1031 aa6.7□□□□□ -1.34
CUS1YMR240C OSH7P38755 437 aa6.7□□□□□ -1.34
CUS1YMR240C CTR9P89105 1077 aa6.7□□□□□ -1.34
CUS1YMR240C DAL4Q04895 635 aa6.7□□□□□ -1.34
CUS1YMR240C MAG2Q06436 670 aaKnown RBP6.7□□□□□ -1.34
CUS1YMR240C KAR2P16474 682 aaKnown RBP6.69□□□□□ -1.34
CUS1YMR240C PEP7P32609 515 aa6.69□□□□□ -1.34
CUS1YMR240C FAA3P39002 694 aa6.69□□□□□ -1.34
CUS1YMR240C YNR040WP53736 256 aa6.69□□□□□ -1.34
CUS1YMR240C MSH6Q03834 1242 aa6.69□□□□□ -1.34
CUS1YMR240C PRP40P33203 583 aaKnown RBP6.68□□□□□ -1.34
CUS1YMR240C MRPL16P38064 232 aa6.68□□□□□ -1.34
CUS1YMR240C NCL1P38205 684 aaKnown RBP6.68□□□□□ -1.34
CUS1YMR240C ECM2P38241 364 aaKnown RBP6.68□□□□□ -1.34
CUS1YMR240C MCD1Q12158 566 aa6.68□□□□□ -1.34
CUS1YMR240C COBP00163 385 aa6.67□□□□□ -1.34
CUS1YMR240C CLN2P20438 545 aa6.67□□□□□ -1.34
CUS1YMR240C PYC2P32327 1180 aaKnown RBP6.67□□□□□ -1.34
CUS1YMR240C MNR2P35724 969 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms