RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	DNM1	P54861	757 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	YML082W	Q04533	649 aa	Known RBP	4.68	□□□□□ -1.66
YSH1	YLR277C	PCL8	Q08966	492 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	TRS33	Q99394	268 aa		4.68	□□□□□ -1.66
YSH1	YLR277C	SWI6	P09959	803 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	ALD4	P46367	519 aa	Known RBP	4.67	□□□□□ -1.66
YSH1	YLR277C	MDM1	Q01846	1127 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	SRP1	Q02821	542 aa	Known RBP	4.67	□□□□□ -1.66
YSH1	YLR277C	VPS30	Q02948	557 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	HEH2	Q03281	663 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	SPO71	Q03868	1245 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	YDR338C	Q05497	695 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	MRD1	Q06106	887 aa	Known RBP	4.67	□□□□□ -1.66
YSH1	YLR277C	RKM4	Q12504	494 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	PRS1	P32895	427 aa	Known RBP	4.67	□□□□□ -1.66
YSH1	YLR277C	YLF2	P38746	405 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	BTN2	P53286	410 aa		4.67	□□□□□ -1.66
YSH1	YLR277C	CLP1	Q08685	445 aa	Predicted RBP	4.67	□□□□□ -1.66
YSH1	YLR277C	NUF2	P33895	451 aa		4.66	□□□□□ -1.66
YSH1	YLR277C	ATG19	P35193	415 aa		4.66	□□□□□ -1.66
YSH1	YLR277C	RPC37	P36121	282 aa		4.66	□□□□□ -1.66
YSH1	YLR277C	UBP13	P38187	747 aa		4.66	□□□□□ -1.66
YSH1	YLR277C	GUA1	P38625	525 aa	Known RBP	4.66	□□□□□ -1.66
YSH1	YLR277C	ARB1	P40024	610 aa	Known RBP	4.66	□□□□□ -1.66
YSH1	YLR277C	CYB2	P00175	591 aa		4.66	□□□□□ -1.66
YSH1	YLR277C	SEC26	P41810	973 aa	Known RBP	4.66	□□□□□ -1.66
YSH1	YLR277C	KEL2	P50090	882 aa		4.66	□□□□□ -1.66
YSH1	YLR277C	PXR1	P53335	271 aa	Predicted RBP	4.66	□□□□□ -1.66
YSH1	YLR277C	PHM6	Q05637	104 aa		4.66	□□□□□ -1.66
YSH1	YLR277C	CFT1	Q06632	1357 aa	Known RBP	4.65	□□□□□ -1.66
YSH1	YLR277C	FAR1	P21268	830 aa		4.65	□□□□□ -1.66
YSH1	YLR277C	PEP12	P32854	288 aa		4.65	□□□□□ -1.66
YSH1	YLR277C	VPS20	Q04272	221 aa		4.65	□□□□□ -1.66
YSH1	YLR277C	ENT2	Q05785	613 aa		4.65	□□□□□ -1.66
YSH1	YLR277C	PMT7	Q06644	662 aa		4.65	□□□□□ -1.66
YSH1	YLR277C	PET123	P17558	318 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	ELM1	P32801	640 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	TTI1	P36097	1038 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	UBP12	P39538	1254 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	PEX21	P50091	288 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	VTI1	Q04338	217 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	YOL057W	Q08225	711 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	THR4	P16120	514 aa	Known RBP	4.64	□□□□□ -1.67
YSH1	YLR277C	VPS41	P38959	992 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	HPC2	Q01448	625 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	YPR097W	Q06839	1073 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	NKP1	Q12493	238 aa		4.64	□□□□□ -1.67
YSH1	YLR277C	RPC31	P17890	251 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	SIT4	P20604	311 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	CLB1	P24868	471 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	ROX1	P25042	368 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	RTG2	P32608	588 aa	Known RBP	4.63	□□□□□ -1.67
YSH1	YLR277C	SWH1	P35845	1188 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	EXO84	P38261	753 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	CIC1	P38779	376 aa	Known RBP	4.63	□□□□□ -1.67
YSH1	YLR277C	HGH1	P48362	394 aa	Known RBP	4.63	□□□□□ -1.67
YSH1	YLR277C	PEX19	Q07418	342 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	HMG1	P12683	1054 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	RGR1	P19263	1082 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	RRN6	P32786	894 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	DLD1	P32891	587 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	NIP100	P33420	868 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	COY1	P34237	679 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	MET1	P36150	593 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	SLN1	P39928	1220 aa	Predicted RBP	4.63	□□□□□ -1.67
YSH1	YLR277C	IAH1	P41734	238 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	SPO19	Q03029	223 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	PUF6	Q04373	656 aa	Known RBP	4.63	□□□□□ -1.67
YSH1	YLR277C	ARR2	Q06597	130 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	IRC3	Q06683	689 aa		4.63	□□□□□ -1.67
YSH1	YLR277C	TPM1	P17536	199 aa	Known RBP	4.62	□□□□□ -1.67
YSH1	YLR277C	BUD14	P27637	709 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	EFB1	P32471	206 aa	Known RBP	4.62	□□□□□ -1.67
YSH1	YLR277C	TIF3	P34167	436 aa	Known RBP	4.62	□□□□□ -1.67
YSH1	YLR277C	YEL1	P34225	687 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	MEF2	P39677	819 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	SWD1	P39706	426 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	SDS3	P40505	327 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
YSH1	YLR277C	YNL050C	P53952	270 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	ARV1	Q06541	321 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	SPA2	P23201	1466 aa	Known RBP	4.62	□□□□□ -1.67
YSH1	YLR277C	DPS1	P04802	557 aa	Known RBP	4.62	□□□□□ -1.67
YSH1	YLR277C	TOM71	P38825	639 aa	Known RBP	4.62	□□□□□ -1.67
YSH1	YLR277C	CHZ1	P40019	153 aa	Predicted RBP	4.62	□□□□□ -1.67
YSH1	YLR277C	YDL073W	Q07454	984 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	YPR015C	Q12531	247 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	YIL002W-A	Q3E7Z5	69 aa		4.62	□□□□□ -1.67
YSH1	YLR277C	RAD3	P06839	778 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	RAM1	P22007	431 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	APN1	P22936	367 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	MRPL25	P23369	157 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	PSE1	P32337	1089 aa	Known RBP	4.61	□□□□□ -1.67
YSH1	YLR277C	ETP1	P38748	585 aa	Known RBP	4.61	□□□□□ -1.67
YSH1	YLR277C	RTT105	P40063	208 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	MVP1	P40959	511 aa	Known RBP	4.61	□□□□□ -1.67
YSH1	YLR277C	CSC1	Q06538	782 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	SLX4	Q12098	748 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	MRE11	P32829	692 aa		4.61	□□□□□ -1.67
YSH1	YLR277C	YIR042C	P40586	236 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms