RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	CDC4	P07834	779 aa		3.12	□□□□□ -1.91
RIC1	YLR039C	AFT1	P22149	690 aa		3.12	□□□□□ -1.91
RIC1	YLR039C	MSB3	P48566	633 aa	Predicted RBP	3.12	□□□□□ -1.91
RIC1	YLR039C	CDC55	Q00362	526 aa		3.12	□□□□□ -1.91
RIC1	YLR039C	TIF6	Q12522	245 aa	Known RBP	3.12	□□□□□ -1.91
RIC1	YLR039C	RPS26A	P39938	119 aa	Known RBP	3.11	□□□□□ -1.91
RIC1	YLR039C	RPS26B	P39939	119 aa	Known RBP	3.11	□□□□□ -1.91
RIC1	YLR039C	LDH1	P38139	375 aa		3.11	□□□□□ -1.91
RIC1	YLR039C	PTK2	P47116	818 aa	Known RBP	3.11	□□□□□ -1.91
RIC1	YLR039C	PSH1	Q12161	406 aa		3.11	□□□□□ -1.91
RIC1	YLR039C	FAA3	P39002	694 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	MSN5	P52918	1224 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	RSC4	Q02206	625 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	UTP4	Q06679	776 aa	Known RBP	3.1	□□□□□ -1.91
RIC1	YLR039C	IRE1	P32361	1115 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	RAD55	P38953	406 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	YJR115W	P47152	169 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	MTO1	P53070	669 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	RPC31	P17890	251 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	PDC6	P26263	563 aa	Known RBP	3.1	□□□□□ -1.91
RIC1	YLR039C	UGA4	P32837	571 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	HST3	P53687	447 aa		3.1	□□□□□ -1.91
RIC1	YLR039C	COB	P00163	385 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	ARG82	P07250	355 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	SMC1	P32908	1225 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	OCA5	P38738	679 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	DYS1	P38791	387 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	NTA1	P40354	457 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	CTR9	P89105	1077 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	BSC2	Q05611	235 aa		3.09	□□□□□ -1.91
RIC1	YLR039C	KAP122	P32767	1081 aa		3.09	□□□□□ -1.92
RIC1	YLR039C	PSY2	P40164	858 aa		3.09	□□□□□ -1.92
RIC1	YLR039C	ALD3	P54114	506 aa		3.09	□□□□□ -1.92
RIC1	YLR039C	INP54	Q08227	384 aa	Known RBP	3.09	□□□□□ -1.92
RIC1	YLR039C	CYC8	P14922	966 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	DUR3	P33413	735 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	YJR098C	P47139	656 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	NOC3	Q07896	663 aa	Predicted RBP	3.08	□□□□□ -1.92
RIC1	YLR039C	DAL1	P32375	460 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	GCD6	P32501	712 aa	Known RBP	3.08	□□□□□ -1.92
RIC1	YLR039C	PEP7	P32609	515 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	VPS35	P34110	944 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	ALD6	P54115	500 aa	Known RBP	3.08	□□□□□ -1.92
RIC1	YLR039C	SVF1	Q05515	481 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	EMG1	Q06287	252 aa	Known RBP	3.08	□□□□□ -1.92
RIC1	YLR039C	HXK1	P04806	485 aa	Known RBP	3.08	□□□□□ -1.92
RIC1	YLR039C	VAC8	P39968	578 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	SAM37	P50110	327 aa		3.08	□□□□□ -1.92
RIC1	YLR039C	CUS1	Q02554	436 aa	Predicted RBP	3.08	□□□□□ -1.92
RIC1	YLR039C	DPS1	P04802	557 aa	Known RBP	3.07	□□□□□ -1.92
RIC1	YLR039C	IRS4	P36115	615 aa	Known RBP	3.07	□□□□□ -1.92
RIC1	YLR039C	AHP1	P38013	176 aa	Known RBP	3.07	□□□□□ -1.92
RIC1	YLR039C	GIP1	P38229	639 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	RTT106	P40161	455 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	YGR122W	P53272	402 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	YNR040W	P53736	256 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	YOR296W	Q08748	1289 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	RGA1	P39083	1007 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	FIR1	P40020	876 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	VPS16	Q03308	798 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	DAL4	Q04895	635 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	TCB1	Q12466	1186 aa		3.07	□□□□□ -1.92
RIC1	YLR039C	LEU1	P07264	779 aa	Known RBP	3.06	□□□□□ -1.92
RIC1	YLR039C	ISW1	P38144	1129 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	ITC1	P53125	1264 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	SRF1	Q12516	437 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	RAD2	P07276	1031 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	YHL008C	P38750	627 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	YTA6	P40328	754 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	YTA7	P40340	1379 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	FLP1	P03870	423 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	CIC1	P38779	376 aa	Known RBP	3.06	□□□□□ -1.92
RIC1	YLR039C	VTC4	P47075	721 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	MON1	P53129	644 aa		3.06	□□□□□ -1.92
RIC1	YLR039C	NUP85	P46673	744 aa		3.05	□□□□□ -1.92
RIC1	YLR039C	OXR1	Q08952	273 aa		3.05	□□□□□ -1.92
RIC1	YLR039C	PIN2	Q12057	282 aa		3.05	□□□□□ -1.92
RIC1	YLR039C	MCM5	P29496	775 aa	Known RBP	3.05	□□□□□ -1.92
RIC1	YLR039C	PRP40	P33203	583 aa	Known RBP	3.05	□□□□□ -1.92
RIC1	YLR039C	YIL165C	P40446	119 aa		3.05	□□□□□ -1.92
RIC1	YLR039C	RGP1	P16664	663 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	PYC2	P32327	1180 aa	Known RBP	3.04	□□□□□ -1.92
RIC1	YLR039C	AIM46	P38885	310 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	SKP1	P52286	194 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	LSC2	P53312	427 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	YCS4	Q06156	1176 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	PIC2	P40035	300 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	MAD1	P40957	749 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	ESF1	Q06344	628 aa	Known RBP	3.04	□□□□□ -1.92
RIC1	YLR039C	CDC19	P00549	500 aa	Known RBP	3.04	□□□□□ -1.92
RIC1	YLR039C	NAM8	Q00539	523 aa	Known RBP	3.04	□□□□□ -1.92
RIC1	YLR039C	SRC1	Q03707	834 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	AIM44	Q99299	758 aa		3.04	□□□□□ -1.92
RIC1	YLR039C	PET112	P33893	541 aa		3.03	□□□□□ -1.92
RIC1	YLR039C	MRPL16	P38064	232 aa		3.03	□□□□□ -1.92
RIC1	YLR039C	SSF2	Q12153	453 aa	Predicted RBP	3.03	□□□□□ -1.92
RIC1	YLR039C	PRE9	P23638	258 aa	Known RBP	3.03	□□□□□ -1.92
RIC1	YLR039C	DUT1	P33317	147 aa		3.03	□□□□□ -1.92
RIC1	YLR039C	APM2	P38700	605 aa		3.03	□□□□□ -1.92
RIC1	YLR039C	IOC3	P43596	787 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 93.4 ms