RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W ERO1Q03103 563 aa8.21□□□□□ -1.1
PRE3YJL001W CDC73Q06697 393 aa8.21□□□□□ -1.1
PRE3YJL001W TYW1Q08960 810 aaKnown RBP8.21□□□□□ -1.1
PRE3YJL001W ICL1P28240 557 aaPredicted RBP8.2□□□□□ -1.1
PRE3YJL001W SHC1P39000 512 aa8.2□□□□□ -1.1
PRE3YJL001W PEX29Q03370 554 aa8.2□□□□□ -1.1
PRE3YJL001W POM152P39685 1337 aa8.2□□□□□ -1.1
PRE3YJL001W KAR2P16474 682 aaKnown RBP8.19□□□□□ -1.1
PRE3YJL001W RTG2P32608 588 aaKnown RBP8.19□□□□□ -1.1
PRE3YJL001W NIS1P53939 407 aa8.19□□□□□ -1.1
PRE3YJL001W TFB4Q12004 338 aa8.19□□□□□ -1.1
PRE3YJL001W PHM7Q12252 991 aa8.19□□□□□ -1.1
PRE3YJL001W MDG1P53885 366 aa8.18□□□□□ -1.1
PRE3YJL001W RAT1Q02792 1006 aaKnown RBP8.18□□□□□ -1.1
PRE3YJL001W SER1P33330 395 aaKnown RBP8.17□□□□□ -1.1
PRE3YJL001W AKL1P38080 1108 aaKnown RBP8.17□□□□□ -1.1
PRE3YJL001W YJL007CP47080 104 aa8.17□□□□□ -1.1
PRE3YJL001W BDF2Q07442 638 aa8.17□□□□□ -1.1
PRE3YJL001W VPS13Q07878 3144 aa8.17□□□□□ -1.1
PRE3YJL001W VRP1P37370 817 aa8.16□□□□□ -1.1
PRE3YJL001W BIM1P40013 344 aa8.16□□□□□ -1.1
PRE3YJL001W HST2P53686 357 aa8.16□□□□□ -1.1
PRE3YJL001W AOS1Q06624 347 aa8.16□□□□□ -1.1
PRE3YJL001W IRC3Q06683 689 aa8.16□□□□□ -1.1
PRE3YJL001W ALE1Q08548 619 aa8.16□□□□□ -1.1
PRE3YJL001W CAF20P12962 161 aaKnown RBP8.15□□□□□ -1.1
PRE3YJL001W YKU70P32807 602 aa8.15□□□□□ -1.1
PRE3YJL001W SPT23P35210 1082 aa8.15□□□□□ -1.1
PRE3YJL001W XDJ1P39102 459 aa8.15□□□□□ -1.1
PRE3YJL001W YFR016CP43597 1233 aaKnown RBP8.15□□□□□ -1.1
PRE3YJL001W SIT4P20604 311 aa8.14□□□□□ -1.11
PRE3YJL001W KCC4P25389 1037 aa8.14□□□□□ -1.11
PRE3YJL001W YGL082WP53155 381 aa8.14□□□□□ -1.11
PRE3YJL001W HAP5Q02516 242 aa8.14□□□□□ -1.11
PRE3YJL001W MMP1Q12372 583 aa8.14□□□□□ -1.11
PRE3YJL001W HKR1P41809 1802 aa8.13□□□□□ -1.11
PRE3YJL001W DIB1Q06819 143 aaPredicted RBP8.13□□□□□ -1.11
PRE3YJL001W YBL036CP38197 257 aa8.12□□□□□ -1.11
PRE3YJL001W PKH3Q03306 898 aaPredicted RBP8.12□□□□□ -1.11
PRE3YJL001W PDS5Q04264 1277 aa8.12□□□□□ -1.11
PRE3YJL001W GRX6Q12438 231 aa8.12□□□□□ -1.11
PRE3YJL001W ARG8P18544 423 aa8.11□□□□□ -1.11
PRE3YJL001W ESS1P22696 170 aa8.11□□□□□ -1.11
PRE3YJL001W NTH2P35172 780 aa8.11□□□□□ -1.11
PRE3YJL001W ATG32P40458 529 aa8.11□□□□□ -1.11
PRE3YJL001W PAP2P53632 584 aaKnown RBP8.11□□□□□ -1.11
PRE3YJL001W UBP16Q02863 499 aa8.11□□□□□ -1.11
PRE3YJL001W DPL1Q05567 589 aa8.11□□□□□ -1.11
PRE3YJL001W MPC54Q08550 464 aa8.11□□□□□ -1.11
PRE3YJL001W SSP2Q08646 371 aa8.11□□□□□ -1.11
PRE3YJL001W SCJ1P25303 377 aa8.1□□□□□ -1.11
PRE3YJL001W YIL089WP40500 205 aa8.1□□□□□ -1.11
PRE3YJL001W BNI4P53858 892 aa8.1□□□□□ -1.11
PRE3YJL001W TRK1P12685 1235 aa8.09□□□□□ -1.11
PRE3YJL001W RPL34BP40525 121 aaKnown RBP8.09□□□□□ -1.11
PRE3YJL001W FET4P40988 552 aa8.09□□□□□ -1.11
PRE3YJL001W RAD59Q12223 238 aa8.09□□□□□ -1.11
PRE3YJL001W YRR1Q12172 810 aa8.07□□□□□ -1.12
PRE3YJL001W MSM1P22438 575 aa8.06□□□□□ -1.12
PRE3YJL001W YJU3P28321 313 aa8.06□□□□□ -1.12
PRE3YJL001W TIM50Q02776 476 aa8.06□□□□□ -1.12
PRE3YJL001W YPR204WQ08995 1032 aa8.06□□□□□ -1.12
PRE3YJL001W ISU2Q12056 156 aa8.06□□□□□ -1.12
PRE3YJL001W SSK22P25390 1331 aaPredicted RBP8.05□□□□□ -1.12
PRE3YJL001W TIF1P10081 395 aaKnown RBP8.05□□□□□ -1.12
PRE3YJL001W SDH2P21801 266 aa8.05□□□□□ -1.12
PRE3YJL001W UGA3P26370 528 aa8.05□□□□□ -1.12
PRE3YJL001W FRD1P32614 470 aaKnown RBP8.05□□□□□ -1.12
PRE3YJL001W NMA111P53920 997 aa8.05□□□□□ -1.12
PRE3YJL001W SYF1Q04048 859 aaPredicted RBP8.05□□□□□ -1.12
PRE3YJL001W YML082WQ04533 649 aaKnown RBP8.05□□□□□ -1.12
PRE3YJL001W BIO2P32451 375 aa8.04□□□□□ -1.12
PRE3YJL001W PTC2P39966 464 aaKnown RBP8.04□□□□□ -1.12
PRE3YJL001W PEA2P40091 420 aa8.04□□□□□ -1.12
PRE3YJL001W SAS4Q04003 481 aa8.04□□□□□ -1.12
PRE3YJL001W SLY41P22215 453 aa8.03□□□□□ -1.12
PRE3YJL001W APL2P36000 726 aaPredicted RBP8.03□□□□□ -1.12
PRE3YJL001W HAT1Q12341 374 aa8.03□□□□□ -1.12
PRE3YJL001W LYS2P07702 1392 aa8.02□□□□□ -1.13
PRE3YJL001W EMP47P43555 445 aa8.02□□□□□ -1.13
PRE3YJL001W RRP46P53256 223 aaPredicted RBP8.02□□□□□ -1.13
PRE3YJL001W SRF1Q12516 437 aa8.02□□□□□ -1.13
PRE3YJL001W ERG12P07277 443 aa8.01□□□□□ -1.13
PRE3YJL001W YGR117CP53270 476 aa8.01□□□□□ -1.13
PRE3YJL001W TRM44Q02648 567 aaKnown RBP8.01□□□□□ -1.13
PRE3YJL001W SUB2Q07478 446 aaKnown RBP8.01□□□□□ -1.13
PRE3YJL001W TIF6Q12522 245 aaKnown RBP8.01□□□□□ -1.13
PRE3YJL001W VPS4P52917 437 aa8□□□□□ -1.13
PRE3YJL001W YNL115CP53925 644 aa8□□□□□ -1.13
PRE3YJL001W YNL108CP53929 270 aa8□□□□□ -1.13
PRE3YJL001W NSE3Q05541 303 aa8□□□□□ -1.13
PRE3YJL001W STV1P37296 890 aa7.99□□□□□ -1.13
PRE3YJL001W YNL050CP53952 270 aa7.99□□□□□ -1.13
PRE3YJL001W CWC15Q03772 175 aaKnown RBP7.99□□□□□ -1.13
PRE3YJL001W MAC1P35192 417 aa7.98□□□□□ -1.13
PRE3YJL001W HVG1P0CE11 249 aa7.97□□□□□ -1.13
PRE3YJL001W HPR1P17629 752 aaKnown RBP7.97□□□□□ -1.13
PRE3YJL001W NUD1P32336 851 aa7.97□□□□□ -1.13
PRE3YJL001W RSC30P38781 883 aa7.97□□□□□ -1.13
PRE3YJL001W ZDS2P54786 942 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms