RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C FIR1P40020 876 aa7.79□□□□□ -1.16
YIR043CYIR043C QDR2P40474 542 aa7.79□□□□□ -1.16
YIR043CYIR043C NOC3Q07896 663 aaPredicted RBP7.79□□□□□ -1.16
YIR043CYIR043C OXR1Q08952 273 aa7.79□□□□□ -1.16
YIR043CYIR043C RAD55P38953 406 aa7.78□□□□□ -1.16
YIR043CYIR043C XDJ1P39102 459 aa7.78□□□□□ -1.16
YIR043CYIR043C MAD1P40957 749 aa7.78□□□□□ -1.16
YIR043CYIR043C ARG82P07250 355 aa7.77□□□□□ -1.17
YIR043CYIR043C CIC1P38779 376 aaKnown RBP7.77□□□□□ -1.17
YIR043CYIR043C SSN3P39073 555 aa7.77□□□□□ -1.17
YIR043CYIR043C YTA6P40328 754 aa7.77□□□□□ -1.17
YIR043CYIR043C RSC4Q02206 625 aa7.77□□□□□ -1.17
YIR043CYIR043C BSC2Q05611 235 aa7.77□□□□□ -1.17
YIR043CYIR043C AAD14P42884 376 aa7.76□□□□□ -1.17
YIR043CYIR043C HST3P53687 447 aa7.76□□□□□ -1.17
YIR043CYIR043C MSN1P22148 382 aa7.75□□□□□ -1.17
YIR043CYIR043C JJJ2P46997 583 aa7.75□□□□□ -1.17
YIR043CYIR043C RMD1Q03441 430 aa7.75□□□□□ -1.17
YIR043CYIR043C RPS31P05759 152 aaKnown RBP7.74□□□□□ -1.17
YIR043CYIR043C KAP122P32767 1081 aa7.74□□□□□ -1.17
YIR043CYIR043C ASH1P34233 588 aa7.74□□□□□ -1.17
YIR043CYIR043C SHM1P37292 490 aaPredicted RBP7.74□□□□□ -1.17
YIR043CYIR043C VAC8P39968 578 aa7.74□□□□□ -1.17
YIR043CYIR043C NTA1P40354 457 aa7.74□□□□□ -1.17
YIR043CYIR043C MSB3P48566 633 aaPredicted RBP7.74□□□□□ -1.17
YIR043CYIR043C MSN5P52918 1224 aa7.74□□□□□ -1.17
YIR043CYIR043C ALD6P54115 500 aaKnown RBP7.74□□□□□ -1.17
YIR043CYIR043C RAS1P01119 309 aa7.73□□□□□ -1.17
YIR043CYIR043C CDC4P07834 779 aa7.73□□□□□ -1.17
YIR043CYIR043C IRS4P36115 615 aaKnown RBP7.73□□□□□ -1.17
YIR043CYIR043C AHP1P38013 176 aaKnown RBP7.73□□□□□ -1.17
YIR043CYIR043C RGA1P39083 1007 aa7.73□□□□□ -1.17
YIR043CYIR043C AIR1P40507 360 aaKnown RBP7.73□□□□□ -1.17
YIR043CYIR043C RGD2P43556 714 aa7.73□□□□□ -1.17
YIR043CYIR043C MTO1P53070 669 aa7.73□□□□□ -1.17
YIR043CYIR043C YGR122WP53272 402 aa7.73□□□□□ -1.17
YIR043CYIR043C ESF1Q06344 628 aaKnown RBP7.73□□□□□ -1.17
YIR043CYIR043C INP54Q08227 384 aaKnown RBP7.73□□□□□ -1.17
YIR043CYIR043C TIF6Q12522 245 aaKnown RBP7.73□□□□□ -1.17
YIR043CYIR043C AFT1P22149 690 aa7.72□□□□□ -1.17
YIR043CYIR043C PSY2P40164 858 aa7.72□□□□□ -1.17
YIR043CYIR043C ALD3P54114 506 aa7.72□□□□□ -1.17
YIR043CYIR043C VPS16Q03308 798 aa7.72□□□□□ -1.17
YIR043CYIR043C TOS4Q06266 489 aa7.72□□□□□ -1.17
YIR043CYIR043C CYC8P14922 966 aa7.71□□□□□ -1.18
YIR043CYIR043C IRE1P32361 1115 aa7.71□□□□□ -1.18
YIR043CYIR043C DLD1P32891 587 aa7.71□□□□□ -1.18
YIR043CYIR043C YBR287WP38355 427 aa7.71□□□□□ -1.18
YIR043CYIR043C YHL008CP38750 627 aa7.71□□□□□ -1.18
YIR043CYIR043C DAL4Q04895 635 aa7.71□□□□□ -1.18
YIR043CYIR043C PIN2Q12057 282 aa7.71□□□□□ -1.18
YIR043CYIR043C SRF1Q12516 437 aa7.71□□□□□ -1.18
YIR043CYIR043C CLN2P20438 545 aa7.7□□□□□ -1.18
YIR043CYIR043C ISW1P38144 1129 aa7.7□□□□□ -1.18
YIR043CYIR043C BSD2P38356 321 aa7.7□□□□□ -1.18
YIR043CYIR043C RAD2P07276 1031 aa7.69□□□□□ -1.18
YIR043CYIR043C PET112P33893 541 aa7.69□□□□□ -1.18
YIR043CYIR043C GIP1P38229 639 aa7.69□□□□□ -1.18
YIR043CYIR043C FAA3P39002 694 aa7.69□□□□□ -1.18
YIR043CYIR043C HXK1P04806 485 aaKnown RBP7.68□□□□□ -1.18
YIR043CYIR043C PTK2P47116 818 aaKnown RBP7.68□□□□□ -1.18
YIR043CYIR043C CWC24P53769 259 aa7.68□□□□□ -1.18
YIR043CYIR043C PDC6P26263 563 aaKnown RBP7.67□□□□□ -1.18
YIR043CYIR043C YCS4Q06156 1176 aa7.67□□□□□ -1.18
YIR043CYIR043C YOR296WQ08748 1289 aa7.67□□□□□ -1.18
YIR043CYIR043C PSH1Q12161 406 aa7.67□□□□□ -1.18
YIR043CYIR043C YOL098CQ12496 1037 aa7.67□□□□□ -1.18
YIR043CYIR043C RPC31P17890 251 aa7.66□□□□□ -1.18
YIR043CYIR043C DAL1P32375 460 aa7.66□□□□□ -1.18
YIR043CYIR043C NAB2P32505 525 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
YIR043CYIR043C SLA1P32790 1244 aa7.66□□□□□ -1.18
YIR043CYIR043C MRPS18P42847 217 aa7.66□□□□□ -1.18
YIR043CYIR043C FPR4Q06205 392 aaPredicted RBP7.66□□□□□ -1.18
YIR043CYIR043C TY1A-DR3Q12441 440 aa7.66□□□□□ -1.18
YIR043CYIR043C FLP1P03870 423 aa7.65□□□□□ -1.18
YIR043CYIR043C PRP40P33203 583 aaKnown RBP7.65□□□□□ -1.18
YIR043CYIR043C MNR2P35724 969 aa7.65□□□□□ -1.18
YIR043CYIR043C ECM2P38241 364 aaKnown RBP7.65□□□□□ -1.18
YIR043CYIR043C AIM46P38885 310 aa7.65□□□□□ -1.18
YIR043CYIR043C WRS1Q12109 432 aaKnown RBP7.65□□□□□ -1.18
YIR043CYIR043C YJR115WP47152 169 aa7.64□□□□□ -1.19
YIR043CYIR043C LEU1P07264 779 aaKnown RBP7.63□□□□□ -1.19
YIR043CYIR043C KAR2P16474 682 aaKnown RBP7.63□□□□□ -1.19
YIR043CYIR043C CUS1Q02554 436 aaPredicted RBP7.63□□□□□ -1.19
YIR043CYIR043C PRE9P23638 258 aaKnown RBP7.62□□□□□ -1.19
YIR043CYIR043C SRP40P32583 406 aaPredicted RBP7.62□□□□□ -1.19
YIR043CYIR043C YJR098CP47139 656 aa7.62□□□□□ -1.19
YIR043CYIR043C MON1P53129 644 aa7.62□□□□□ -1.19
YIR043CYIR043C LSC2P53312 427 aa7.62□□□□□ -1.19
YIR043CYIR043C EMG1Q06287 252 aaKnown RBP7.62□□□□□ -1.19
YIR043CYIR043C MCD1Q12158 566 aa7.62□□□□□ -1.19
YIR043CYIR043C NUP85P46673 744 aa7.61□□□□□ -1.19
YIR043CYIR043C VTC4P47075 721 aa7.61□□□□□ -1.19
YIR043CYIR043C MCM5P29496 775 aaKnown RBP7.6□□□□□ -1.19
YIR043CYIR043C UGA4P32837 571 aa7.6□□□□□ -1.19
YIR043CYIR043C BRN1P38170 754 aa7.6□□□□□ -1.19
YIR043CYIR043C CTR9P89105 1077 aa7.6□□□□□ -1.19
YIR043CYIR043C SSF2Q12153 453 aaPredicted RBP7.6□□□□□ -1.19
YIR043CYIR043C YIL165CP40446 119 aa7.59□□□□□ -1.19
YIR043CYIR043C ITC1P53125 1264 aa7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms