RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W GEF1P37020 779 aa16.37■□□□□ 0.21
RPN10YHR200W TIF4632P39936 914 aaKnown RBP16.37■□□□□ 0.21
RPN10YHR200W OPI1P21957 404 aa16.36■□□□□ 0.21
RPN10YHR200W NPL4P33755 580 aa16.36■□□□□ 0.21
RPN10YHR200W AAP1P37898 856 aaKnown RBP16.35■□□□□ 0.21
RPN10YHR200W GLO3P38682 493 aaKnown RBP16.35■□□□□ 0.21
RPN10YHR200W SPL2P38839 148 aa16.35■□□□□ 0.21
RPN10YHR200W HAL5P38970 855 aaKnown RBP16.35■□□□□ 0.21
RPN10YHR200W PMD1P32634 1753 aa16.34■□□□□ 0.21
RPN10YHR200W CYB2P00175 591 aa16.33■□□□□ 0.2
RPN10YHR200W HXT13P39924 564 aa16.33■□□□□ 0.2
RPN10YHR200W YKU70P32807 602 aa16.32■□□□□ 0.2
RPN10YHR200W IRC4Q03036 179 aa16.32■□□□□ 0.2
RPN10YHR200W RNR2P09938 399 aaKnown RBP16.31■□□□□ 0.2
RPN10YHR200W JJJ2P46997 583 aa16.31■□□□□ 0.2
RPN10YHR200W HXT17P53631 564 aa16.31■□□□□ 0.2
RPN10YHR200W FIG2P25653 1609 aa16.3■□□□□ 0.2
RPN10YHR200W PIB2P53191 635 aa16.29■□□□□ 0.2
RPN10YHR200W INM2Q05533 292 aa16.29■□□□□ 0.2
RPN10YHR200W RET1P22276 1149 aaKnown RBP16.28■□□□□ 0.2
RPN10YHR200W LCB1P25045 558 aaKnown RBP16.28■□□□□ 0.2
RPN10YHR200W SPO22P40511 975 aa16.28■□□□□ 0.2
RPN10YHR200W YFH7P43591 353 aa16.28■□□□□ 0.2
RPN10YHR200W IRC8P47046 822 aa16.28■□□□□ 0.2
RPN10YHR200W KIN4Q01919 800 aa16.28■□□□□ 0.2
RPN10YHR200W TAH18Q12181 623 aa16.28■□□□□ 0.2
RPN10YHR200W YMR147WP40218 223 aaKnown RBP16.27■□□□□ 0.2
RPN10YHR200W YIR042CP40586 236 aa16.27■□□□□ 0.2
RPN10YHR200W KRI1P42846 591 aaKnown RBP16.27■□□□□ 0.2
RPN10YHR200W IOC3P43596 787 aa16.27■□□□□ 0.2
RPN10YHR200W BBC1P47068 1157 aa16.27■□□□□ 0.2
RPN10YHR200W SSF2Q12153 453 aaPredicted RBP16.27■□□□□ 0.2
RPN10YHR200W DUR1,2P32528 1835 aaKnown RBP16.26■□□□□ 0.19
RPN10YHR200W BOI1P38041 980 aaKnown RBP16.26■□□□□ 0.19
RPN10YHR200W RLF2Q12495 606 aa16.26■□□□□ 0.19
RPN10YHR200W PCT1P13259 424 aa16.25■□□□□ 0.19
RPN10YHR200W ICL1P28240 557 aaPredicted RBP16.25■□□□□ 0.19
RPN10YHR200W MET1P36150 593 aa16.25■□□□□ 0.19
RPN10YHR200W OPY1P38271 328 aa16.25■□□□□ 0.19
RPN10YHR200W SRS2P12954 1174 aa16.24■□□□□ 0.19
RPN10YHR200W SIS2P36024 562 aa16.24■□□□□ 0.19
RPN10YHR200W PRP42Q03776 544 aaKnown RBP16.24■□□□□ 0.19
RPN10YHR200W PTK1P36002 662 aaPredicted RBP16.23■□□□□ 0.19
RPN10YHR200W RRP8P38961 392 aaKnown RBP16.23■□□□□ 0.19
RPN10YHR200W SHC1P39000 512 aa16.23■□□□□ 0.19
RPN10YHR200W WRS1Q12109 432 aaKnown RBP16.23■□□□□ 0.19
RPN10YHR200W MDL2P33311 773 aa16.22■□□□□ 0.19
RPN10YHR200W SKI2P35207 1287 aaKnown RBP RIP-Chip data16.22■□□□□ 0.19not detected
RPN10YHR200W PKH3Q03306 898 aaPredicted RBP16.22■□□□□ 0.19
RPN10YHR200W KAR5Q04746 504 aa16.22■□□□□ 0.19
RPN10YHR200W RRG1Q12167 365 aaPredicted RBP16.22■□□□□ 0.19
RPN10YHR200W GRX7P38068 203 aa16.21■□□□□ 0.19
RPN10YHR200W DPL1Q05567 589 aa16.21■□□□□ 0.19
RPN10YHR200W ACK1Q07622 623 aaPredicted RBP16.21■□□□□ 0.19
RPN10YHR200W RPT3P33298 428 aaKnown RBP16.2■□□□□ 0.18
RPN10YHR200W LAM4P38800 1345 aa16.19■□□□□ 0.18
RPN10YHR200W FAS2P19097 1887 aaKnown RBP16.19■□□□□ 0.18
RPN10YHR200W TOP1P04786 769 aa16.19■□□□□ 0.18
RPN10YHR200W ARG82P07250 355 aa16.19■□□□□ 0.18
RPN10YHR200W PIP2P52960 996 aa16.19■□□□□ 0.18
RPN10YHR200W TRL1P09880 827 aaKnown RBP16.18■□□□□ 0.18
RPN10YHR200W SET4P42948 560 aa16.18■□□□□ 0.18
RPN10YHR200W EAF7P53911 425 aaKnown RBP16.18■□□□□ 0.18
RPN10YHR200W CRF1Q04930 467 aa16.18■□□□□ 0.18
RPN10YHR200W LSP1Q12230 341 aaKnown RBP16.18■□□□□ 0.18
RPN10YHR200W HKR1P41809 1802 aa16.17■□□□□ 0.18
RPN10YHR200W SLN1P39928 1220 aaPredicted RBP16.17■□□□□ 0.18
RPN10YHR200W GSM1P42950 618 aa16.17■□□□□ 0.18
RPN10YHR200W APL6P46682 809 aa16.17■□□□□ 0.18
RPN10YHR200W VPS24P36095 224 aaKnown RBP16.16■□□□□ 0.18
RPN10YHR200W CIC1P38779 376 aaKnown RBP16.16■□□□□ 0.18
RPN10YHR200W AIM9P40053 627 aaKnown RBP16.16■□□□□ 0.18
RPN10YHR200W DIP2Q12220 943 aaPredicted RBP16.16■□□□□ 0.18
RPN10YHR200W MSM1P22438 575 aa16.15■□□□□ 0.18
RPN10YHR200W PEP3P27801 918 aa16.15■□□□□ 0.18
RPN10YHR200W CRG1P38892 291 aaRIP-Chip data16.15■□□□□ 0.18not detected
RPN10YHR200W TOS4Q06266 489 aa16.15■□□□□ 0.18
RPN10YHR200W SPN1Q06505 410 aaPredicted RBP16.15■□□□□ 0.18
RPN10YHR200W IME2P32581 645 aa16.14■□□□□ 0.17
RPN10YHR200W PUS6P53294 404 aa16.14■□□□□ 0.17
RPN10YHR200W SQS1P53866 767 aaKnown RBP16.14■□□□□ 0.17
RPN10YHR200W ESF1Q06344 628 aaKnown RBP16.14■□□□□ 0.17
RPN10YHR200W SNF3P10870 884 aa16.13■□□□□ 0.17
RPN10YHR200W FPK1P53739 893 aa16.13■□□□□ 0.17
RPN10YHR200W ARP5P53946 755 aa16.12■□□□□ 0.17
RPN10YHR200W SEN54Q02825 467 aaPredicted RBP16.12■□□□□ 0.17
RPN10YHR200W GAS5Q08193 484 aa16.12■□□□□ 0.17
RPN10YHR200W IMP2'P32351 346 aa16.11■□□□□ 0.17
RPN10YHR200W AFG2P32794 780 aa16.11■□□□□ 0.17
RPN10YHR200W RTS1P38903 757 aa16.11■□□□□ 0.17
RPN10YHR200W MRD1Q06106 887 aaKnown RBP16.11■□□□□ 0.17
RPN10YHR200W ATG20Q07528 640 aa16.11■□□□□ 0.17
RPN10YHR200W PPM2Q08282 695 aa16.11■□□□□ 0.17
RPN10YHR200W COQ1P18900 473 aa16.09■□□□□ 0.17
RPN10YHR200W RPS7AP26786 190 aaKnown RBP16.09■□□□□ 0.17
RPN10YHR200W YKE2P52553 114 aa16.09■□□□□ 0.17
RPN10YHR200W UFD2P54860 961 aa16.09■□□□□ 0.17
RPN10YHR200W PSK2Q08217 1101 aa16.09■□□□□ 0.17
RPN10YHR200W YPL260WQ08977 551 aa16.09■□□□□ 0.17
RPN10YHR200W RPL19AP0CX82 189 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms