RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C TRK1P12685 1235 aa6.38□□□□□ -1.39
TRM1YDR120C PAM1P37304 830 aaKnown RBP6.38□□□□□ -1.39
TRM1YDR120C YTA6P40328 754 aa6.38□□□□□ -1.39
TRM1YDR120C SMC1P32908 1225 aa6.37□□□□□ -1.39
TRM1YDR120C NOP7P53261 605 aaKnown RBP6.37□□□□□ -1.39
TRM1YDR120C PDC6P26263 563 aaKnown RBP6.36□□□□□ -1.39
TRM1YDR120C KAP122P32767 1081 aa6.36□□□□□ -1.39
TRM1YDR120C PSH1Q12161 406 aa6.36□□□□□ -1.39
TRM1YDR120C SWR1Q05471 1514 aa6.36□□□□□ -1.39
TRM1YDR120C RGA1P39083 1007 aa6.36□□□□□ -1.39
TRM1YDR120C YNL011CP53980 444 aa6.36□□□□□ -1.39
TRM1YDR120C CDC55Q00362 526 aa6.36□□□□□ -1.39
TRM1YDR120C TCB1Q12466 1186 aa6.36□□□□□ -1.39
TRM1YDR120C PHO4P07270 312 aaKnown RBP6.35□□□□□ -1.39
TRM1YDR120C RPC31P17890 251 aa6.35□□□□□ -1.39
TRM1YDR120C MSN1P22148 382 aa6.35□□□□□ -1.39
TRM1YDR120C MTO1P53070 669 aa6.35□□□□□ -1.39
TRM1YDR120C SRC1Q03707 834 aa6.35□□□□□ -1.39
TRM1YDR120C STB3Q12427 513 aa6.35□□□□□ -1.39
TRM1YDR120C LEU1P07264 779 aaKnown RBP6.34□□□□□ -1.39
TRM1YDR120C MGE1P38523 228 aa6.34□□□□□ -1.39
TRM1YDR120C RGD2P43556 714 aa6.34□□□□□ -1.39
TRM1YDR120C YJR107WP47145 328 aa6.34□□□□□ -1.39
TRM1YDR120C RAD55P38953 406 aa6.33□□□□□ -1.4
TRM1YDR120C FIR1P40020 876 aa6.33□□□□□ -1.4
TRM1YDR120C NTA1P40354 457 aa6.33□□□□□ -1.4
TRM1YDR120C RSC4Q02206 625 aa6.33□□□□□ -1.4
TRM1YDR120C SEC8P32855 1065 aa6.33□□□□□ -1.4
TRM1YDR120C BRE2P43132 505 aa6.33□□□□□ -1.4
TRM1YDR120C UBP15P50101 1230 aa6.33□□□□□ -1.4
TRM1YDR120C UBP2Q01476 1272 aa6.32□□□□□ -1.4
TRM1YDR120C YOR296WQ08748 1289 aa6.32□□□□□ -1.4
TRM1YDR120C KOG1P38873 1557 aa6.31□□□□□ -1.4
TRM1YDR120C GCD6P32501 712 aaKnown RBP6.31□□□□□ -1.4
TRM1YDR120C IRS4P36115 615 aaKnown RBP6.31□□□□□ -1.4
TRM1YDR120C ISW1P38144 1129 aa6.31□□□□□ -1.4
TRM1YDR120C GIP1P38229 639 aa6.31□□□□□ -1.4
TRM1YDR120C BSD2P38356 321 aa6.31□□□□□ -1.4
TRM1YDR120C DAK2P43550 591 aa6.31□□□□□ -1.4
TRM1YDR120C OYE2Q03558 400 aaKnown RBP6.31□□□□□ -1.4
TRM1YDR120C TIF6Q12522 245 aaKnown RBP6.31□□□□□ -1.4
TRM1YDR120C CDC19P00549 500 aaKnown RBP6.3□□□□□ -1.4
TRM1YDR120C NAB2P32505 525 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
TRM1YDR120C SAM37P50110 327 aa6.3□□□□□ -1.4
TRM1YDR120C SKP1P52286 194 aa6.3□□□□□ -1.4
TRM1YDR120C GCR2Q01722 534 aa6.3□□□□□ -1.4
TRM1YDR120C OPT2Q06593 877 aa6.3□□□□□ -1.4
TRM1YDR120C RPT1P33299 467 aaKnown RBP6.3□□□□□ -1.4
TRM1YDR120C PSY2P40164 858 aa6.3□□□□□ -1.4
TRM1YDR120C CUS1Q02554 436 aaPredicted RBP6.3□□□□□ -1.4
TRM1YDR120C BSC2Q05611 235 aa6.3□□□□□ -1.4
TRM1YDR120C YLR346CQ06139 101 aa6.3□□□□□ -1.4
TRM1YDR120C TCB3Q03640 1545 aaKnown RBP6.3□□□□□ -1.4
TRM1YDR120C RGP1P16664 663 aa6.29□□□□□ -1.4
TRM1YDR120C VPS35P34110 944 aa6.29□□□□□ -1.4
TRM1YDR120C YBR287WP38355 427 aa6.29□□□□□ -1.4
TRM1YDR120C MET10P39692 1035 aa6.29□□□□□ -1.4
TRM1YDR120C MET1P36150 593 aa6.28□□□□□ -1.4
TRM1YDR120C GLY1P37303 387 aaKnown RBP6.28□□□□□ -1.4
TRM1YDR120C OSH7P38755 437 aa6.28□□□□□ -1.4
TRM1YDR120C FYV10P40492 516 aa6.28□□□□□ -1.4
TRM1YDR120C NOC3Q07896 663 aaPredicted RBP6.28□□□□□ -1.4
TRM1YDR120C CIC1P38779 376 aaKnown RBP6.27□□□□□ -1.41
TRM1YDR120C SVF1Q05515 481 aa6.27□□□□□ -1.41
TRM1YDR120C EMG1Q06287 252 aaKnown RBP6.26□□□□□ -1.41
TRM1YDR120C TY1A-BLQ12266 440 aa6.26□□□□□ -1.41
TRM1YDR120C APM2P38700 605 aa6.25□□□□□ -1.41
TRM1YDR120C AIM46P38885 310 aa6.25□□□□□ -1.41
TRM1YDR120C ITC1P53125 1264 aa6.25□□□□□ -1.41
TRM1YDR120C TY1B-DR4Q07793 1604 aa6.25□□□□□ -1.41
TRM1YDR120C MCM2P29469 868 aa6.25□□□□□ -1.41
TRM1YDR120C MRPL16P38064 232 aa6.25□□□□□ -1.41
TRM1YDR120C YIL165CP40446 119 aa6.25□□□□□ -1.41
TRM1YDR120C SCW11P53189 542 aa6.25□□□□□ -1.41
TRM1YDR120C YNR040WP53736 256 aa6.25□□□□□ -1.41
TRM1YDR120C NAM8Q00539 523 aaKnown RBP6.25□□□□□ -1.41
TRM1YDR120C INP54Q08227 384 aaKnown RBP6.25□□□□□ -1.41
TRM1YDR120C SPR28Q04921 423 aa6.24□□□□□ -1.41
TRM1YDR120C OXR1Q08952 273 aa6.24□□□□□ -1.41
TRM1YDR120C CTR9P89105 1077 aa6.23□□□□□ -1.41
TRM1YDR120C TOS4Q06266 489 aa6.23□□□□□ -1.41
TRM1YDR120C FLP1P03870 423 aa6.22□□□□□ -1.41
TRM1YDR120C YHL008CP38750 627 aa6.22□□□□□ -1.41
TRM1YDR120C RPP1AP05318 106 aaPredicted RBP6.22□□□□□ -1.41
TRM1YDR120C NCL1P38205 684 aaKnown RBP6.22□□□□□ -1.41
TRM1YDR120C RPS26AP39938 119 aaKnown RBP6.22□□□□□ -1.41
TRM1YDR120C RPS26BP39939 119 aaKnown RBP6.22□□□□□ -1.41
TRM1YDR120C YGR122WP53272 402 aa6.22□□□□□ -1.41
TRM1YDR120C LCB5Q06147 687 aaKnown RBP6.21□□□□□ -1.42
TRM1YDR120C COBP00163 385 aa6.2□□□□□ -1.42
TRM1YDR120C MET22P32179 357 aa6.2□□□□□ -1.42
TRM1YDR120C YER156CP40093 338 aaKnown RBP6.2□□□□□ -1.42
TRM1YDR120C YCS4Q06156 1176 aa6.2□□□□□ -1.42
TRM1YDR120C HXK1P04806 485 aaKnown RBP6.19□□□□□ -1.42
TRM1YDR120C CYC8P14922 966 aa6.19□□□□□ -1.42
TRM1YDR120C PYC2P32327 1180 aaKnown RBP6.19□□□□□ -1.42
TRM1YDR120C FAA3P39002 694 aa6.19□□□□□ -1.42
TRM1YDR120C ROG3P43602 733 aa6.19□□□□□ -1.42
TRM1YDR120C RMD1Q03441 430 aa6.19□□□□□ -1.42
TRM1YDR120C YDR444WQ04093 687 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms