RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W PSK2Q08217 1101 aa8.16□□□□□ -1.1
TOD6YBL054W TFC8Q12308 588 aa8.16□□□□□ -1.1
TOD6YBL054W FKS3Q04952 1785 aa8.16□□□□□ -1.1
TOD6YBL054W RAD4P14736 754 aa8.15□□□□□ -1.1
TOD6YBL054W MAL33P38157 468 aa8.15□□□□□ -1.1
TOD6YBL054W MSH4P40965 878 aaPredicted RBP8.15□□□□□ -1.1
TOD6YBL054W TFG2P41896 400 aaPredicted RBP8.15□□□□□ -1.1
TOD6YBL054W RRB1Q04225 511 aaKnown RBP8.15□□□□□ -1.1
TOD6YBL054W GYL1Q04322 720 aa8.15□□□□□ -1.1
TOD6YBL054W STE11P23561 717 aa8.14□□□□□ -1.11
TOD6YBL054W GSY2P27472 705 aa8.14□□□□□ -1.11
TOD6YBL054W SRP40P32583 406 aaPredicted RBP8.14□□□□□ -1.11
TOD6YBL054W SIC1P38634 284 aa8.14□□□□□ -1.11
TOD6YBL054W NOC2P39744 710 aaKnown RBP8.14□□□□□ -1.11
TOD6YBL054W PRP3Q03338 469 aaPredicted RBP8.14□□□□□ -1.11
TOD6YBL054W YCG1Q06680 1035 aa8.14□□□□□ -1.11
TOD6YBL054W BNI1P41832 1953 aa8.14□□□□□ -1.11
TOD6YBL054W VID28P40547 921 aa8.14□□□□□ -1.11
TOD6YBL054W RBA50Q04418 439 aa8.14□□□□□ -1.11
TOD6YBL054W APL4Q12028 832 aa8.14□□□□□ -1.11
TOD6YBL054W SWI1P09547 1314 aa8.13□□□□□ -1.11
TOD6YBL054W NUP133P36161 1157 aa8.13□□□□□ -1.11
TOD6YBL054W YHL017WP38745 532 aa8.13□□□□□ -1.11
TOD6YBL054W MLC1P53141 149 aa8.13□□□□□ -1.11
TOD6YBL054W CTF4Q01454 927 aa8.13□□□□□ -1.11
TOD6YBL054W MCM16Q12262 181 aa8.13□□□□□ -1.11
TOD6YBL054W CDC15P27636 974 aa8.12□□□□□ -1.11
TOD6YBL054W SLD2P34252 453 aa8.12□□□□□ -1.11
TOD6YBL054W PCH2P38126 564 aa8.12□□□□□ -1.11
TOD6YBL054W APT1P49435 187 aaKnown RBP8.12□□□□□ -1.11
TOD6YBL054W YGL242CP53066 181 aa8.12□□□□□ -1.11
TOD6YBL054W UBC1P21734 215 aaKnown RBP8.11□□□□□ -1.11
TOD6YBL054W MSH3P25336 1018 aa8.11□□□□□ -1.11
TOD6YBL054W KCC4P25389 1037 aa8.11□□□□□ -1.11
TOD6YBL054W KTR1P27810 393 aaKnown RBP8.11□□□□□ -1.11
TOD6YBL054W PSE1P32337 1089 aaKnown RBP8.11□□□□□ -1.11
TOD6YBL054W RFC5P38251 354 aa8.11□□□□□ -1.11
TOD6YBL054W SSF1P38789 453 aaPredicted RBP8.11□□□□□ -1.11
TOD6YBL054W VPS75P53853 264 aa8.11□□□□□ -1.11
TOD6YBL054W RRP1P35178 278 aaPredicted RBP8.1□□□□□ -1.11
TOD6YBL054W SWH1P35845 1188 aa8.1□□□□□ -1.11
TOD6YBL054W YKT6P36015 200 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W REI1P38344 393 aaPredicted RBP8.1□□□□□ -1.11
TOD6YBL054W STM1P39015 273 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W UBP10P53874 792 aaPredicted RBP8.1□□□□□ -1.11
TOD6YBL054W ALO1P54783 526 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W DPB3P27344 201 aa8.1□□□□□ -1.11
TOD6YBL054W RIM101P33400 625 aa8.1□□□□□ -1.11
TOD6YBL054W PSY4P38193 441 aa8.1□□□□□ -1.11
TOD6YBL054W RGD1P38339 666 aa8.1□□□□□ -1.11
TOD6YBL054W CIC1P38779 376 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W CAJ1P39101 391 aa8.1□□□□□ -1.11
TOD6YBL054W BUD6P41697 788 aa8.1□□□□□ -1.11
TOD6YBL054W STR2P47164 639 aa8.1□□□□□ -1.11
TOD6YBL054W YKE2P52553 114 aa8.1□□□□□ -1.11
TOD6YBL054W ZDS2P54786 942 aa8.1□□□□□ -1.11
TOD6YBL054W OMS1Q06668 471 aa8.1□□□□□ -1.11
TOD6YBL054W YPL225WQ08971 146 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W PGA3Q12746 312 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W MATALPHA2P0CY08 210 aa8.09□□□□□ -1.11
TOD6YBL054W HMLALPHA2P0CY09 210 aa8.09□□□□□ -1.11
TOD6YBL054W KTR3P38130 404 aaPredicted RBP8.09□□□□□ -1.11
TOD6YBL054W RFT1P38206 574 aaPredicted RBP8.09□□□□□ -1.11
TOD6YBL054W CCT4P39078 528 aaKnown RBP8.09□□□□□ -1.11
TOD6YBL054W NDC80P40460 691 aa8.09□□□□□ -1.11
TOD6YBL054W CST6P40535 587 aa8.09□□□□□ -1.11
TOD6YBL054W CTK3P46963 296 aaPredicted RBP8.09□□□□□ -1.11
TOD6YBL054W YNL035CP53962 389 aaKnown RBP8.09□□□□□ -1.11
TOD6YBL054W DNM1P54861 757 aa8.09□□□□□ -1.11
TOD6YBL054W SRP54P20424 541 aaKnown RBP8.08□□□□□ -1.12
TOD6YBL054W RRP43P25359 394 aaPredicted RBP8.08□□□□□ -1.12
TOD6YBL054W BYE1P36106 594 aa8.08□□□□□ -1.12
TOD6YBL054W SAP1P39955 897 aaKnown RBP8.08□□□□□ -1.12
TOD6YBL054W MAL13P53338 473 aa8.08□□□□□ -1.12
TOD6YBL054W RPO26P20435 155 aa8.07□□□□□ -1.12
TOD6YBL054W UBP12P39538 1254 aa8.07□□□□□ -1.12
TOD6YBL054W CAF130P53280 1122 aaPredicted RBP8.07□□□□□ -1.12
TOD6YBL054W ITT1Q04638 464 aa8.07□□□□□ -1.12
TOD6YBL054W ATG23Q06671 453 aa8.07□□□□□ -1.12
TOD6YBL054W TMA16Q08687 178 aa8.07□□□□□ -1.12
TOD6YBL054W ISW2Q08773 1120 aa8.07□□□□□ -1.12
TOD6YBL054W FBP26P32604 452 aa8.06□□□□□ -1.12
TOD6YBL054W YEL043WP32618 956 aa8.06□□□□□ -1.12
TOD6YBL054W PIB2P53191 635 aa8.06□□□□□ -1.12
TOD6YBL054W PUS1Q12211 544 aaKnown RBP8.06□□□□□ -1.12
TOD6YBL054W PHO13P19881 312 aa8.05□□□□□ -1.12
TOD6YBL054W SWI3P32591 825 aa8.05□□□□□ -1.12
TOD6YBL054W YLR407WQ06070 228 aa8.05□□□□□ -1.12
TOD6YBL054W PDC1P06169 563 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W LPD1P09624 499 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W PGI1P12709 554 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W MCM4P30665 933 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W STO1P34160 861 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W MIF2P35201 549 aa8.05□□□□□ -1.12
TOD6YBL054W DEF1P35732 738 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W MUD2P36084 527 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W SEC9P40357 651 aa8.05□□□□□ -1.12
TOD6YBL054W ALE1Q08548 619 aa8.05□□□□□ -1.12
TOD6YBL054W ATG9Q12142 997 aa8.05□□□□□ -1.12
TOD6YBL054W RUD3Q12234 484 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms