RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 TXNDC2Q86VQ3 553 aa12.65□□□□□ -0.38
SUPT4H1-206ENST00000581204 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
SUPT4H1-206ENST00000581204 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
SUPT4H1-206ENST00000581204 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
SUPT4H1-206ENST00000581204 KCNA6P17658 529 aa12.64□□□□□ -0.39
SUPT4H1-206ENST00000581204 MEX3CQ5U5Q3 659 aaKnown RBP12.64□□□□□ -0.39
SUPT4H1-206ENST00000581204 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
SUPT4H1-206ENST00000581204 EP400Q96L91 3159 aa12.63□□□□□ -0.39
SUPT4H1-206ENST00000581204 MSH6P52701 1360 aa12.62□□□□□ -0.39
SUPT4H1-206ENST00000581204 ITGAEP38570 1179 aa12.62□□□□□ -0.39
SUPT4H1-206ENST00000581204 CCDC141Q6ZP82 1450 aa12.61□□□□□ -0.39
SUPT4H1-206ENST00000581204 TMEM2Q9UHN6 1383 aa12.61□□□□□ -0.39
SUPT4H1-206ENST00000581204 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
SUPT4H1-206ENST00000581204 CEP152O94986 1710 aa12.61□□□□□ -0.39
SUPT4H1-206ENST00000581204 PIK3C2BO00750 1634 aa12.61□□□□□ -0.39
SUPT4H1-206ENST00000581204 AFF2P51816 1311 aa12.61□□□□□ -0.39
SUPT4H1-206ENST00000581204 PTPN23Q9H3S7 1636 aa12.6□□□□□ -0.39
SUPT4H1-206ENST00000581204 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
SUPT4H1-206ENST00000581204 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
SUPT4H1-206ENST00000581204 MAST1Q9Y2H9 1570 aa12.59□□□□□ -0.39
SUPT4H1-206ENST00000581204 LRP5O75197 1615 aa12.59□□□□□ -0.39
SUPT4H1-206ENST00000581204 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
SUPT4H1-206ENST00000581204 EIF2AK4Q9P2K8 1649 aaKnown RBP12.57□□□□□ -0.4
SUPT4H1-206ENST00000581204 ATAD2Q6PL18 1390 aa12.56□□□□□ -0.4
SUPT4H1-206ENST00000581204 MAP3K13O43283 966 aa12.56□□□□□ -0.4
SUPT4H1-206ENST00000581204 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-206ENST00000581204 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-206ENST00000581204 RBM6P78332 1123 aaKnown RBP12.55□□□□□ -0.4
SUPT4H1-206ENST00000581204 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-206ENST00000581204 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
SUPT4H1-206ENST00000581204 SLC26A8Q96RN1 970 aa12.55□□□□□ -0.4
SUPT4H1-206ENST00000581204 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
SUPT4H1-206ENST00000581204 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-206ENST00000581204 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
SUPT4H1-206ENST00000581204 EFCAB6Q5THR3 1501 aa12.54□□□□□ -0.4
SUPT4H1-206ENST00000581204 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-206ENST00000581204 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
SUPT4H1-206ENST00000581204 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
SUPT4H1-206ENST00000581204 SOX12O15370 315 aa12.53□□□□□ -0.4
SUPT4H1-206ENST00000581204 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
SUPT4H1-206ENST00000581204 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.41
SUPT4H1-206ENST00000581204 SETD5Q9C0A6 1442 aa12.52□□□□□ -0.41
SUPT4H1-206ENST00000581204 NLRP6P59044 892 aa12.51□□□□□ -0.41
SUPT4H1-206ENST00000581204 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
SUPT4H1-206ENST00000581204 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
SUPT4H1-206ENST00000581204 NHSL1Q5SYE7 1610 aa12.5□□□□□ -0.41
SUPT4H1-206ENST00000581204 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
SUPT4H1-206ENST00000581204 ASXL1Q8IXJ9 1541 aa12.48□□□□□ -0.41
SUPT4H1-206ENST00000581204 TPRNQ4KMQ1 711 aa12.48□□□□□ -0.41
SUPT4H1-206ENST00000581204 ADGRB3O60242 1522 aa12.47□□□□□ -0.41
SUPT4H1-206ENST00000581204 BRINP3Q76B58 766 aa12.47□□□□□ -0.41
SUPT4H1-206ENST00000581204 C8orf37Q96NL8 207 aa12.47□□□□□ -0.41
SUPT4H1-206ENST00000581204 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
SUPT4H1-206ENST00000581204 DAPK1P53355 1430 aa12.46□□□□□ -0.41
SUPT4H1-206ENST00000581204 CCER1Q8TC90 406 aaPredicted RBP12.46□□□□□ -0.41
SUPT4H1-206ENST00000581204 CHIC2Q9UKJ5 165 aa12.46□□□□□ -0.41
SUPT4H1-206ENST00000581204 PNPLA6Q8IY17 1366 aa12.45□□□□□ -0.42
SUPT4H1-206ENST00000581204 RSPH4AQ5TD94 716 aa12.45□□□□□ -0.42
SUPT4H1-206ENST00000581204 ABCC5O15440 1437 aa12.45□□□□□ -0.42
SUPT4H1-206ENST00000581204 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
SUPT4H1-206ENST00000581204 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
SUPT4H1-206ENST00000581204 IDI1Q13907 227 aa12.44□□□□□ -0.42
SUPT4H1-206ENST00000581204 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
SUPT4H1-206ENST00000581204 ATRNO75882 1429 aa12.44□□□□□ -0.42
SUPT4H1-206ENST00000581204 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
SUPT4H1-206ENST00000581204 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
SUPT4H1-206ENST00000581204 PLEKHG1Q9ULL1 1385 aa12.43□□□□□ -0.42
SUPT4H1-206ENST00000581204 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
SUPT4H1-206ENST00000581204 TSPY4P0CV99 314 aa12.42□□□□□ -0.42
SUPT4H1-206ENST00000581204 TSPY10P0CW01 314 aa12.42□□□□□ -0.42
SUPT4H1-206ENST00000581204 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
SUPT4H1-206ENST00000581204 CCDC125Q86Z20 511 aa12.42□□□□□ -0.42
SUPT4H1-206ENST00000581204 RRP7BPQ9NSQ0 103 aa12.42□□□□□ -0.42
SUPT4H1-206ENST00000581204 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
SUPT4H1-206ENST00000581204 NOS1P29475 1434 aa12.41□□□□□ -0.42
SUPT4H1-206ENST00000581204 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
SUPT4H1-206ENST00000581204 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
SUPT4H1-206ENST00000581204 DUOX2Q9NRD8 1548 aa12.41□□□□□ -0.42
SUPT4H1-206ENST00000581204 RAB3GAP2Q9H2M9 1393 aa12.41□□□□□ -0.42
SUPT4H1-206ENST00000581204 HFM1A2PYH4 1435 aa12.4□□□□□ -0.42
SUPT4H1-206ENST00000581204 DCCP43146 1447 aa12.4□□□□□ -0.42
SUPT4H1-206ENST00000581204 MST1RQ04912 1400 aa12.4□□□□□ -0.42
SUPT4H1-206ENST00000581204 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
SUPT4H1-206ENST00000581204 LMTK2Q8IWU2 1503 aa12.4□□□□□ -0.42
SUPT4H1-206ENST00000581204 ADAMTS13Q76LX8 1427 aa12.39□□□□□ -0.43
SUPT4H1-206ENST00000581204 ROCK1Q13464 1354 aa12.39□□□□□ -0.43
SUPT4H1-206ENST00000581204 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
SUPT4H1-206ENST00000581204 BLMP54132 1417 aaPredicted RBP12.38□□□□□ -0.43
SUPT4H1-206ENST00000581204 ATF3P18847 181 aa12.38□□□□□ -0.43
SUPT4H1-206ENST00000581204 ANKRD30AQ9BXX3 1397 aa12.38□□□□□ -0.43
SUPT4H1-206ENST00000581204 NAIPQ13075 1403 aa12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 HRCP23327 699 aa12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 LAMC1P11047 1609 aa12.37□□□□□ -0.43
SUPT4H1-206ENST00000581204 DEFB132Q7Z7B7 95 aa12.36□□□□□ -0.43
SUPT4H1-206ENST00000581204 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms