RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-222ENST00000538689 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.87
FDFT1-222ENST00000538689 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.87
FDFT1-222ENST00000538689 PIK3C2GO75747 1445 aa9.64□□□□□ -0.87
FDFT1-222ENST00000538689 LMTK3Q96Q04 1460 aa9.64□□□□□ -0.87
FDFT1-222ENST00000538689 SETBP1Q9Y6X0 1596 aa9.63□□□□□ -0.87
FDFT1-222ENST00000538689 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
FDFT1-222ENST00000538689 HSPA2P54652 639 aa9.63□□□□□ -0.87
FDFT1-222ENST00000538689 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
FDFT1-222ENST00000538689 C14orf93Q9H972 538 aaKnown RBP9.63□□□□□ -0.87
FDFT1-222ENST00000538689 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
FDFT1-222ENST00000538689 TNRQ92752 1358 aa9.62□□□□□ -0.87
FDFT1-222ENST00000538689 ZFYVE9O95405 1425 aa9.62□□□□□ -0.87
FDFT1-222ENST00000538689 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
FDFT1-222ENST00000538689 CDCA8Q53HL2 280 aa9.62□□□□□ -0.87
FDFT1-222ENST00000538689 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
FDFT1-222ENST00000538689 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
FDFT1-222ENST00000538689 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
FDFT1-222ENST00000538689 TMEM131LA2VDJ0 1609 aa9.61□□□□□ -0.87
FDFT1-222ENST00000538689 PER1O15534 1290 aaPredicted RBP9.61□□□□□ -0.87
FDFT1-222ENST00000538689 CCDC184Q52MB2 194 aa9.61□□□□□ -0.87
FDFT1-222ENST00000538689 CEP170BQ9Y4F5 1589 aaPredicted RBP9.6□□□□□ -0.87
FDFT1-222ENST00000538689 ZNF142P52746 1687 aaPredicted RBP9.6□□□□□ -0.87
FDFT1-222ENST00000538689 UBR1Q8IWV7 1749 aa9.6□□□□□ -0.87
FDFT1-222ENST00000538689 ADGRB1O14514 1584 aa9.6□□□□□ -0.87
FDFT1-222ENST00000538689 MRS2Q9HD23 443 aa9.59□□□□□ -0.87
FDFT1-222ENST00000538689 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
FDFT1-222ENST00000538689 RALBP1Q15311 655 aa9.59□□□□□ -0.87
FDFT1-222ENST00000538689 NEUROD2Q15784 382 aa9.58□□□□□ -0.88
FDFT1-222ENST00000538689 PANK3Q9H999 370 aa9.58□□□□□ -0.88
FDFT1-222ENST00000538689 A2ML1A8K2U0 1454 aa9.57□□□□□ -0.88
FDFT1-222ENST00000538689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.57□□□□□ -0.88
FDFT1-222ENST00000538689 STRCQ7RTU9 1775 aa9.57□□□□□ -0.88
FDFT1-222ENST00000538689 NLRP1Q9C000 1473 aa9.57□□□□□ -0.88
FDFT1-222ENST00000538689 PARD3Q8TEW0 1356 aa9.56□□□□□ -0.88
FDFT1-222ENST00000538689 MYBBP1AQ9BQG0 1328 aaKnown RBP9.56□□□□□ -0.88
FDFT1-222ENST00000538689 CENPJQ9HC77 1338 aaPredicted RBP9.56□□□□□ -0.88
FDFT1-222ENST00000538689 POLA2Q14181 598 aa9.56□□□□□ -0.88
FDFT1-222ENST00000538689 NUTM2DQ5VT03 806 aaPredicted RBP9.56□□□□□ -0.88
FDFT1-222ENST00000538689 STAG3Q9UJ98 1225 aa9.56□□□□□ -0.88
FDFT1-222ENST00000538689 TMEM132EQ6IEE7 984 aa9.56□□□□□ -0.88
FDFT1-222ENST00000538689 KDM5AP29375 1690 aaKnown RBP9.55□□□□□ -0.88
FDFT1-222ENST00000538689 HNRNPUQ00839 825 aaKnown RBP eCLIP9.55□□□□□ -0.888e-7■□□□□ 11
FDFT1-222ENST00000538689 FAM9BQ8IZU0 186 aa9.55□□□□□ -0.88
FDFT1-222ENST00000538689 TRAK1Q9UPV9 953 aa9.55□□□□□ -0.88
FDFT1-222ENST00000538689 BRD4O60885 1362 aaPredicted RBP9.55□□□□□ -0.88
FDFT1-222ENST00000538689 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
FDFT1-222ENST00000538689 MYOM1P52179 1685 aa9.53□□□□□ -0.88
FDFT1-222ENST00000538689 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
FDFT1-222ENST00000538689 LTKP29376 864 aa9.53□□□□□ -0.88
FDFT1-222ENST00000538689 NLRP13Q86W25 1043 aa9.53□□□□□ -0.88
FDFT1-222ENST00000538689 TMC1Q8TDI8 760 aa9.53□□□□□ -0.88
FDFT1-222ENST00000538689 PNISRQ8TF01 805 aaKnown RBP9.52□□□□□ -0.89
FDFT1-222ENST00000538689 KNSTRNQ9Y448 316 aa9.52□□□□□ -0.89
FDFT1-222ENST00000538689 QRICH2Q9H0J4 1663 aa9.52□□□□□ -0.89
FDFT1-222ENST00000538689 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
FDFT1-222ENST00000538689 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
FDFT1-222ENST00000538689 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
FDFT1-222ENST00000538689 PUS7Q96PZ0 661 aaKnown RBP9.51□□□□□ -0.89
FDFT1-222ENST00000538689 NPC1L1Q9UHC9 1359 aa9.51□□□□□ -0.89
FDFT1-222ENST00000538689 ARHGAP23Q9P227 1491 aa9.51□□□□□ -0.89
FDFT1-222ENST00000538689 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
FDFT1-222ENST00000538689 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
FDFT1-222ENST00000538689 ALKQ9UM73 1620 aa9.5□□□□□ -0.89
FDFT1-222ENST00000538689 SLIT1O75093 1534 aa9.5□□□□□ -0.89
FDFT1-222ENST00000538689 RIMS2Q9UQ26 1411 aa9.5□□□□□ -0.89
FDFT1-222ENST00000538689 THEMISQ8N1K5 641 aaPredicted RBP9.5□□□□□ -0.89
FDFT1-222ENST00000538689 ZBED9Q6R2W3 1325 aa9.5□□□□□ -0.89
FDFT1-222ENST00000538689 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.49□□□□□ -0.89
FDFT1-222ENST00000538689 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
FDFT1-222ENST00000538689 LRPPRCP42704 1394 aaKnown RBP9.49□□□□□ -0.89
FDFT1-222ENST00000538689 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
FDFT1-222ENST00000538689 HDGFP51858 240 aaKnown RBP9.48□□□□□ -0.89
FDFT1-222ENST00000538689 TXNDC2Q86VQ3 553 aa9.48□□□□□ -0.89
FDFT1-222ENST00000538689 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
FDFT1-222ENST00000538689 STK26Q9P289 416 aa9.47□□□□□ -0.89
FDFT1-222ENST00000538689 TULP4Q9NRJ4 1543 aa9.47□□□□□ -0.89
FDFT1-222ENST00000538689 NRXN3Q9Y4C0 1643 aa9.46□□□□□ -0.89
FDFT1-222ENST00000538689 SETD1AO15047 1707 aaKnown RBP9.46□□□□□ -0.89
FDFT1-222ENST00000538689 STK25O00506 426 aa9.46□□□□□ -0.9
FDFT1-222ENST00000538689 ANKLE2Q86XL3 938 aa9.46□□□□□ -0.9
FDFT1-222ENST00000538689 ARID3AQ99856 593 aa9.46□□□□□ -0.9
FDFT1-222ENST00000538689 SLC24A3Q9HC58 644 aa9.45□□□□□ -0.9
FDFT1-222ENST00000538689 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
FDFT1-222ENST00000538689 PRAM1Q96QH2 718 aa9.45□□□□□ -0.9
FDFT1-222ENST00000538689 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
FDFT1-222ENST00000538689 INSRP06213 1382 aa9.45□□□□□ -0.9
FDFT1-222ENST00000538689 ABCC11Q96J66 1382 aa9.45□□□□□ -0.9
FDFT1-222ENST00000538689 NPHP4O75161 1426 aaPredicted RBP9.45□□□□□ -0.9
FDFT1-222ENST00000538689 MED14O60244 1454 aa9.45□□□□□ -0.9
FDFT1-222ENST00000538689 PPP2R1AP30153 589 aa9.44□□□□□ -0.9
FDFT1-222ENST00000538689 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
FDFT1-222ENST00000538689 SLC26A8Q96RN1 970 aa9.44□□□□□ -0.9
FDFT1-222ENST00000538689 NINLQ9Y2I6 1382 aa9.44□□□□□ -0.9
FDFT1-222ENST00000538689 STRCP1A6NGW2 1772 aa9.44□□□□□ -0.9
FDFT1-222ENST00000538689 ZC3H15Q8WU90 426 aaKnown RBP9.44□□□□□ -0.9
FDFT1-222ENST00000538689 POGKQ9P215 609 aa9.44□□□□□ -0.9
FDFT1-222ENST00000538689 ADAMTS13Q76LX8 1427 aa9.43□□□□□ -0.9
FDFT1-222ENST00000538689 SUPT16HQ9Y5B9 1047 aaKnown RBP9.43□□□□□ -0.9
FDFT1-222ENST00000538689 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
FDFT1-222ENST00000538689 CABP2Q9NPB3 220 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms