RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
ITGB1-218ENST00000528877 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
ITGB1-218ENST00000528877 NLRP1Q9C000 1473 aa11□□□□□ -0.65
ITGB1-218ENST00000528877 VWDEQ8N2E2 1590 aa11□□□□□ -0.65
ITGB1-218ENST00000528877 SLAIN1Q8ND83 568 aa11□□□□□ -0.65
ITGB1-218ENST00000528877 MS4A4AQ96JQ5 239 aa11□□□□□ -0.65
ITGB1-218ENST00000528877 ARHGAP31Q2M1Z3 1444 aa11□□□□□ -0.65
ITGB1-218ENST00000528877 LMTK2Q8IWU2 1503 aa10.99□□□□□ -0.65
ITGB1-218ENST00000528877 TNRQ92752 1358 aa10.99□□□□□ -0.65
ITGB1-218ENST00000528877 FBXO41Q8TF61 875 aa10.98□□□□□ -0.65
ITGB1-218ENST00000528877 ANKRD30AQ9BXX3 1397 aa10.98□□□□□ -0.65
ITGB1-218ENST00000528877 ERVK-7P63135 1459 aa10.98□□□□□ -0.65
ITGB1-218ENST00000528877 CEP152O94986 1710 aa10.98□□□□□ -0.65
ITGB1-218ENST00000528877 WASHC2CQ9Y4E1 1318 aa10.97□□□□□ -0.65
ITGB1-218ENST00000528877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.96□□□□□ -0.65
ITGB1-218ENST00000528877 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
ITGB1-218ENST00000528877 POLR1AO95602 1720 aaPredicted RBP10.95□□□□□ -0.66
ITGB1-218ENST00000528877 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
ITGB1-218ENST00000528877 NEURL4Q96JN8 1562 aa10.95□□□□□ -0.66
ITGB1-218ENST00000528877 IQSEC2Q5JU85 1478 aa10.95□□□□□ -0.66
ITGB1-218ENST00000528877 EFCAB6Q5THR3 1501 aa10.94□□□□□ -0.66
ITGB1-218ENST00000528877 ROCK1Q13464 1354 aa10.94□□□□□ -0.66
ITGB1-218ENST00000528877 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
ITGB1-218ENST00000528877 KDM5AP29375 1690 aaKnown RBP10.93□□□□□ -0.66
ITGB1-218ENST00000528877 SNPHO15079 494 aa10.93□□□□□ -0.66
ITGB1-218ENST00000528877 UNC13BO14795 1591 aa10.93□□□□□ -0.66
ITGB1-218ENST00000528877 SOCS7O14512 581 aa10.92□□□□□ -0.66
ITGB1-218ENST00000528877 MED14O60244 1454 aa10.92□□□□□ -0.66
ITGB1-218ENST00000528877 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
ITGB1-218ENST00000528877 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
ITGB1-218ENST00000528877 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
ITGB1-218ENST00000528877 UBR1Q8IWV7 1749 aa10.91□□□□□ -0.66
ITGB1-218ENST00000528877 RPRD2Q5VT52 1461 aaKnown RBP10.91□□□□□ -0.66
ITGB1-218ENST00000528877 KANK1Q14678 1352 aa10.9□□□□□ -0.66
ITGB1-218ENST00000528877 CERKQ8TCT0 537 aa10.9□□□□□ -0.66
ITGB1-218ENST00000528877 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
ITGB1-218ENST00000528877 SLIT1O75093 1534 aa10.89□□□□□ -0.67
ITGB1-218ENST00000528877 TET3O43151 1660 aa10.89□□□□□ -0.67
ITGB1-218ENST00000528877 ARHGAP23Q9P227 1491 aa10.89□□□□□ -0.67
ITGB1-218ENST00000528877 SYNMO15061 1565 aa10.89□□□□□ -0.67
ITGB1-218ENST00000528877 NOS1P29475 1434 aa10.88□□□□□ -0.67
ITGB1-218ENST00000528877 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
ITGB1-218ENST00000528877 NKX1-1Q15270 411 aaPredicted RBP10.88□□□□□ -0.67
ITGB1-218ENST00000528877 GCC2Q8IWJ2 1684 aa10.88□□□□□ -0.67
ITGB1-218ENST00000528877 IQGAP3Q86VI3 1631 aa10.87□□□□□ -0.67
ITGB1-218ENST00000528877 IQGAP1P46940 1657 aa10.87□□□□□ -0.67
ITGB1-218ENST00000528877 PIK3C2BO00750 1634 aa10.87□□□□□ -0.67
ITGB1-218ENST00000528877 NCKAP5LQ9HCH0 1330 aa10.86□□□□□ -0.67
ITGB1-218ENST00000528877 ADGRB3O60242 1522 aa10.86□□□□□ -0.67
ITGB1-218ENST00000528877 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
ITGB1-218ENST00000528877 CHIC2Q9UKJ5 165 aa10.86□□□□□ -0.67
ITGB1-218ENST00000528877 CPS1P31327 1500 aa10.85□□□□□ -0.67
ITGB1-218ENST00000528877 THEMISQ8N1K5 641 aaPredicted RBP10.85□□□□□ -0.67
ITGB1-218ENST00000528877 NPHP4O75161 1426 aaPredicted RBP10.84□□□□□ -0.67
ITGB1-218ENST00000528877 SCAF11Q99590 1463 aaKnown RBP10.84□□□□□ -0.67
ITGB1-218ENST00000528877 ZNF335Q9H4Z2 1342 aaPredicted RBP10.83□□□□□ -0.68
ITGB1-218ENST00000528877 ANKLE2Q86XL3 938 aa10.82□□□□□ -0.68
ITGB1-218ENST00000528877 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
ITGB1-218ENST00000528877 E9PCH4 1651 aa10.82□□□□□ -0.68
ITGB1-218ENST00000528877 TMEM2Q9UHN6 1383 aa10.8□□□□□ -0.68
ITGB1-218ENST00000528877 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
ITGB1-218ENST00000528877 PPP1R37O75864 691 aa10.8□□□□□ -0.68
ITGB1-218ENST00000528877 SLC52A1Q9NWF4 448 aa10.79□□□□□ -0.68
ITGB1-218ENST00000528877 TMEM131LA2VDJ0 1609 aa10.79□□□□□ -0.68
ITGB1-218ENST00000528877 HFM1A2PYH4 1435 aa10.78□□□□□ -0.68
ITGB1-218ENST00000528877 NAIPQ13075 1403 aa10.78□□□□□ -0.68
ITGB1-218ENST00000528877 DOK7Q18PE1 504 aa10.78□□□□□ -0.68
ITGB1-218ENST00000528877 TMC2Q8TDI7 906 aa10.78□□□□□ -0.68
ITGB1-218ENST00000528877 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
ITGB1-218ENST00000528877 ZFYVE9O95405 1425 aa10.77□□□□□ -0.68
ITGB1-218ENST00000528877 RIMBP2O15034 1052 aa10.77□□□□□ -0.69
ITGB1-218ENST00000528877 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.69
ITGB1-218ENST00000528877 TMEM92Q6UXU6 159 aa10.76□□□□□ -0.69
ITGB1-218ENST00000528877 NWD1Q149M9 1564 aa10.76□□□□□ -0.69
ITGB1-218ENST00000528877 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
ITGB1-218ENST00000528877 IDI1Q13907 227 aa10.75□□□□□ -0.69
ITGB1-218ENST00000528877 ILDR2Q71H61 639 aa10.75□□□□□ -0.69
ITGB1-218ENST00000528877 NUP155O75694 1391 aa10.75□□□□□ -0.69
ITGB1-218ENST00000528877 LRRC7Q96NW7 1537 aa10.74□□□□□ -0.69
ITGB1-218ENST00000528877 ALKQ9UM73 1620 aa10.74□□□□□ -0.69
ITGB1-218ENST00000528877 LTKP29376 864 aa10.74□□□□□ -0.69
ITGB1-218ENST00000528877 TRPM2O94759 1503 aa10.74□□□□□ -0.69
ITGB1-218ENST00000528877 DIP2AQ14689 1571 aa10.73□□□□□ -0.69
ITGB1-218ENST00000528877 KIF3CO14782 793 aa10.73□□□□□ -0.69
ITGB1-218ENST00000528877 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
ITGB1-218ENST00000528877 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
ITGB1-218ENST00000528877 NKTRP30414 1462 aaKnown RBP10.73□□□□□ -0.69
ITGB1-218ENST00000528877 MYO5BQ9ULV0 1848 aa10.72□□□□□ -0.69
ITGB1-218ENST00000528877 ZNF710Q8N1W2 664 aa10.72□□□□□ -0.69
ITGB1-218ENST00000528877 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
ITGB1-218ENST00000528877 ZSWIM6Q9HCJ5 1215 aa10.72□□□□□ -0.69
ITGB1-218ENST00000528877 PLEKHG1Q9ULL1 1385 aa10.72□□□□□ -0.69
ITGB1-218ENST00000528877 C2orf72A6NCS6 295 aa10.71□□□□□ -0.69
ITGB1-218ENST00000528877 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
ITGB1-218ENST00000528877 MARVELD3Q96A59 401 aa10.71□□□□□ -0.69
ITGB1-218ENST00000528877 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
ITGB1-218ENST00000528877 ITGAEP38570 1179 aa10.7□□□□□ -0.7
ITGB1-218ENST00000528877 DISP3Q9P2K9 1392 aa10.69□□□□□ -0.7
ITGB1-218ENST00000528877 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-218ENST00000528877 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms