RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 NEURL4Q96JN8 1562 aa19.31■□□□□ 0.68
MACF1-223ENST00000496360 NOS1P29475 1434 aa19.31■□□□□ 0.68
MACF1-223ENST00000496360 UBR1Q8IWV7 1749 aa19.31■□□□□ 0.68
MACF1-223ENST00000496360 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
MACF1-223ENST00000496360 LTBP4Q8N2S1 1624 aa19.29■□□□□ 0.68
MACF1-223ENST00000496360 HSP90AA1P07900 732 aaKnown RBP19.29■□□□□ 0.68
MACF1-223ENST00000496360 HSP90AA2PQ14568 343 aaPredicted RBP19.29■□□□□ 0.68
MACF1-223ENST00000496360 SYNMO15061 1565 aa19.29■□□□□ 0.68
MACF1-223ENST00000496360 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
MACF1-223ENST00000496360 IQGAP3Q86VI3 1631 aa19.28■□□□□ 0.68
MACF1-223ENST00000496360 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
MACF1-223ENST00000496360 NUP155O75694 1391 aa19.28■□□□□ 0.68
MACF1-223ENST00000496360 PIK3C2BO00750 1634 aa19.27■□□□□ 0.68
MACF1-223ENST00000496360 MED14O60244 1454 aa19.27■□□□□ 0.68
MACF1-223ENST00000496360 ZNF335Q9H4Z2 1342 aaPredicted RBP19.27■□□□□ 0.68
MACF1-223ENST00000496360 PLIN1O60240 522 aa19.27■□□□□ 0.68
MACF1-223ENST00000496360 IDI1Q13907 227 aa19.27■□□□□ 0.68
MACF1-223ENST00000496360 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
MACF1-223ENST00000496360 ZMYND15Q9H091 742 aa19.26■□□□□ 0.67
MACF1-223ENST00000496360 CCDC144AA2RUR9 1427 aa19.26■□□□□ 0.67
MACF1-223ENST00000496360 NPHP4O75161 1426 aaPredicted RBP19.26■□□□□ 0.67
MACF1-223ENST00000496360 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
MACF1-223ENST00000496360 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
MACF1-223ENST00000496360 POGKQ9P215 609 aa19.24■□□□□ 0.67
MACF1-223ENST00000496360 ISY1Q9ULR0 285 aaKnown RBP19.24■□□□□ 0.67
MACF1-223ENST00000496360 SLIT1O75093 1534 aa19.24■□□□□ 0.67
MACF1-223ENST00000496360 ARHGAP23Q9P227 1491 aa19.24■□□□□ 0.67
MACF1-223ENST00000496360 VSIG10Q8N0Z9 540 aa19.24■□□□□ 0.67
MACF1-223ENST00000496360 KDM5AP29375 1690 aaKnown RBP19.24■□□□□ 0.67
MACF1-223ENST00000496360 FSD2A1L4K1 749 aa19.23■□□□□ 0.67
MACF1-223ENST00000496360 MAPK8IP3Q9UPT6 1336 aa19.22■□□□□ 0.67
MACF1-223ENST00000496360 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
MACF1-223ENST00000496360 GOLGA6L3A6NEY3 463 aa19.22■□□□□ 0.67
MACF1-223ENST00000496360 NAP1L5Q96NT1 182 aaPredicted RBP19.22■□□□□ 0.67
MACF1-223ENST00000496360 IQGAP1P46940 1657 aa19.21■□□□□ 0.67
MACF1-223ENST00000496360 TMEM2Q9UHN6 1383 aa19.21■□□□□ 0.67
MACF1-223ENST00000496360 ADGRB3O60242 1522 aa19.21■□□□□ 0.67
MACF1-223ENST00000496360 TXNDC2Q86VQ3 553 aa19.21■□□□□ 0.67
MACF1-223ENST00000496360 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
MACF1-223ENST00000496360 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
MACF1-223ENST00000496360 LTKP29376 864 aa19.2■□□□□ 0.66
MACF1-223ENST00000496360 EID1Q9Y6B2 187 aa19.2■□□□□ 0.66
MACF1-223ENST00000496360 IQSEC2Q5JU85 1478 aa19.2■□□□□ 0.66
MACF1-223ENST00000496360 PER1O15534 1290 aaPredicted RBP19.19■□□□□ 0.66
MACF1-223ENST00000496360 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
MACF1-223ENST00000496360 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
MACF1-223ENST00000496360 USP19O94966 1318 aa19.18■□□□□ 0.66
MACF1-223ENST00000496360 LAMC1P11047 1609 aa19.18■□□□□ 0.66
MACF1-223ENST00000496360 CENPJQ9HC77 1338 aaPredicted RBP19.17■□□□□ 0.66
MACF1-223ENST00000496360 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
MACF1-223ENST00000496360 C20orf194Q5TEA3 1177 aa19.17■□□□□ 0.66
MACF1-223ENST00000496360 ANTXR1Q9H6X2 564 aa19.17■□□□□ 0.66
MACF1-223ENST00000496360 MRE11P49959 708 aa19.15■□□□□ 0.66
MACF1-223ENST00000496360 DUSP27Q5VZP5 1158 aa19.15■□□□□ 0.66
MACF1-223ENST00000496360 CPS1P31327 1500 aa19.15■□□□□ 0.66
MACF1-223ENST00000496360 TPM2P07951 284 aa19.15■□□□□ 0.66
MACF1-223ENST00000496360 XRCC6P12956 609 aaKnown RBP eCLIP19.15■□□□□ 0.66
MACF1-223ENST00000496360 AAMPQ13685 434 aa19.13■□□□□ 0.65
MACF1-223ENST00000496360 ZNF521Q96K83 1311 aa19.13■□□□□ 0.65
MACF1-223ENST00000496360 TMEM131LA2VDJ0 1609 aa19.13■□□□□ 0.65
MACF1-223ENST00000496360 RGS3P49796 1198 aa19.12■□□□□ 0.65
MACF1-223ENST00000496360 UPF2Q9HAU5 1272 aaKnown RBP19.12■□□□□ 0.65
MACF1-223ENST00000496360 GPRASP1Q5JY77 1395 aa19.12■□□□□ 0.65
MACF1-223ENST00000496360 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
MACF1-223ENST00000496360 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
MACF1-223ENST00000496360 CHGAP10645 457 aaKnown RBP19.1■□□□□ 0.65
MACF1-223ENST00000496360 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
MACF1-223ENST00000496360 SPHKAPQ2M3C7 1700 aa19.1■□□□□ 0.65
MACF1-223ENST00000496360 NGEFQ8N5V2 710 aa19.1■□□□□ 0.65
MACF1-223ENST00000496360 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
MACF1-223ENST00000496360 TRPM1Q7Z4N2 1603 aa19.09■□□□□ 0.65
MACF1-223ENST00000496360 RIMS2Q9UQ26 1411 aa19.09■□□□□ 0.65
MACF1-223ENST00000496360 MCM4P33991 863 aa19.08■□□□□ 0.64
MACF1-223ENST00000496360 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.64
MACF1-223ENST00000496360 TRMT2AQ8IZ69 625 aaKnown RBP19.07■□□□□ 0.64
MACF1-223ENST00000496360 PDCL3Q9H2J4 239 aa19.07■□□□□ 0.64
MACF1-223ENST00000496360 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
MACF1-223ENST00000496360 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
MACF1-223ENST00000496360 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
MACF1-223ENST00000496360 ESPNB1AK53 854 aa19.05■□□□□ 0.64
MACF1-223ENST00000496360 UBAP1LF5GYI3 381 aa19.05■□□□□ 0.64
MACF1-223ENST00000496360 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.05■□□□□ 0.64
MACF1-223ENST00000496360 NKTRP30414 1462 aaKnown RBP19.05■□□□□ 0.64
MACF1-223ENST00000496360 PRAG1Q86YV5 1406 aa19.04■□□□□ 0.64
MACF1-223ENST00000496360 TBC1D32Q96NH3 1257 aa19.04■□□□□ 0.64
MACF1-223ENST00000496360 MYH16Q9H6N6 1097 aa19.04■□□□□ 0.64
MACF1-223ENST00000496360 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
MACF1-223ENST00000496360 PLEKHH1Q9ULM0 1364 aa19.04■□□□□ 0.64
MACF1-223ENST00000496360 TRPM2O94759 1503 aa19.04■□□□□ 0.64
MACF1-223ENST00000496360 SLC26A8Q96RN1 970 aa19.04■□□□□ 0.64
MACF1-223ENST00000496360 SLKQ9H2G2 1235 aaPredicted RBP19.04■□□□□ 0.64
MACF1-223ENST00000496360 DDX11L8A8MPP1 907 aa19.03■□□□□ 0.64
MACF1-223ENST00000496360 CHMP5Q9NZZ3 219 aa19.03■□□□□ 0.64
MACF1-223ENST00000496360 WDR43Q15061 677 aaKnown RBP eCLIP19.02■□□□□ 0.64
MACF1-223ENST00000496360 LRRC7Q96NW7 1537 aa19.02■□□□□ 0.64
MACF1-223ENST00000496360 PTMSP20962 102 aa19.02■□□□□ 0.63
MACF1-223ENST00000496360 ADAMTS8Q9UP79 889 aa19.01■□□□□ 0.63
MACF1-223ENST00000496360 TERF1P54274 439 aa19.01■□□□□ 0.63
MACF1-223ENST00000496360 CLTCL1P53675 1640 aa19■□□□□ 0.63
MACF1-223ENST00000496360 CALD1Q05682 793 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms