RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
XRN1-212ENST00000486211 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
XRN1-212ENST00000486211 ATRNO75882 1429 aa13.31□□□□□ -0.28
XRN1-212ENST00000486211 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
XRN1-212ENST00000486211 KANK1Q14678 1352 aa13.3□□□□□ -0.28
XRN1-212ENST00000486211 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
XRN1-212ENST00000486211 TMEM131LA2VDJ0 1609 aa13.29□□□□□ -0.28
XRN1-212ENST00000486211 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
XRN1-212ENST00000486211 ADAMTS2O95450 1211 aa13.29□□□□□ -0.28
XRN1-212ENST00000486211 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
XRN1-212ENST00000486211 USP21Q9UK80 565 aa13.29□□□□□ -0.28
XRN1-212ENST00000486211 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
XRN1-212ENST00000486211 GCC2Q8IWJ2 1684 aa13.28□□□□□ -0.28
XRN1-212ENST00000486211 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
XRN1-212ENST00000486211 FNBP4Q8N3X1 1017 aaPredicted RBP13.28□□□□□ -0.28
XRN1-212ENST00000486211 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
XRN1-212ENST00000486211 RRP7BPQ9NSQ0 103 aa13.27□□□□□ -0.29
XRN1-212ENST00000486211 TRPM2O94759 1503 aa13.27□□□□□ -0.29
XRN1-212ENST00000486211 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.29
XRN1-212ENST00000486211 LAMC1P11047 1609 aa13.25□□□□□ -0.29
XRN1-212ENST00000486211 ABCC5O15440 1437 aa13.25□□□□□ -0.29
XRN1-212ENST00000486211 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
XRN1-212ENST00000486211 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
XRN1-212ENST00000486211 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
XRN1-212ENST00000486211 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
XRN1-212ENST00000486211 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
XRN1-212ENST00000486211 RPRD2Q5VT52 1461 aaKnown RBP13.24□□□□□ -0.29
XRN1-212ENST00000486211 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
XRN1-212ENST00000486211 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
XRN1-212ENST00000486211 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
XRN1-212ENST00000486211 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
XRN1-212ENST00000486211 UNC13BO14795 1591 aa13.21□□□□□ -0.29
XRN1-212ENST00000486211 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
XRN1-212ENST00000486211 SOS2Q07890 1332 aaPredicted RBP13.2□□□□□ -0.3
XRN1-212ENST00000486211 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
XRN1-212ENST00000486211 MYOM2P54296 1465 aa13.19□□□□□ -0.3
XRN1-212ENST00000486211 HRCP23327 699 aa13.19□□□□□ -0.3
XRN1-212ENST00000486211 NRXN3Q9Y4C0 1643 aa13.19□□□□□ -0.3
XRN1-212ENST00000486211 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
XRN1-212ENST00000486211 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
XRN1-212ENST00000486211 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
XRN1-212ENST00000486211 DAPK1P53355 1430 aa13.18□□□□□ -0.3
XRN1-212ENST00000486211 GLI3P10071 1580 aa13.17□□□□□ -0.3
XRN1-212ENST00000486211 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
XRN1-212ENST00000486211 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
XRN1-212ENST00000486211 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
XRN1-212ENST00000486211 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
XRN1-212ENST00000486211 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.15□□□□□ -0.3
XRN1-212ENST00000486211 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
XRN1-212ENST00000486211 RALGAPBQ86X10 1494 aa13.15□□□□□ -0.3
XRN1-212ENST00000486211 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
XRN1-212ENST00000486211 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
XRN1-212ENST00000486211 PTPN23Q9H3S7 1636 aa13.13□□□□□ -0.31
XRN1-212ENST00000486211 METP08581 1390 aa13.13□□□□□ -0.31
XRN1-212ENST00000486211 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
XRN1-212ENST00000486211 YY1P25490 414 aa13.12□□□□□ -0.31
XRN1-212ENST00000486211 CLCN6P51797 869 aa13.12□□□□□ -0.31
XRN1-212ENST00000486211 ORAI2Q96SN7 254 aa13.12□□□□□ -0.31
XRN1-212ENST00000486211 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
XRN1-212ENST00000486211 SLIT2O94813 1529 aa13.11□□□□□ -0.31
XRN1-212ENST00000486211 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
XRN1-212ENST00000486211 E9PCH4 1651 aa13.09□□□□□ -0.31
XRN1-212ENST00000486211 ADGRL2O95490 1459 aa13.09□□□□□ -0.31
XRN1-212ENST00000486211 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
XRN1-212ENST00000486211 PXDNQ92626 1479 aa13.08□□□□□ -0.32
XRN1-212ENST00000486211 IQGAP3Q86VI3 1631 aa13.07□□□□□ -0.32
XRN1-212ENST00000486211 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
XRN1-212ENST00000486211 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
XRN1-212ENST00000486211 ONECUT3O60422 494 aaPredicted RBP13.05□□□□□ -0.32
XRN1-212ENST00000486211 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
XRN1-212ENST00000486211 BAG6P46379 1132 aa13.04□□□□□ -0.32
XRN1-212ENST00000486211 R3HDM1Q15032 1099 aaKnown RBP13.04□□□□□ -0.32
XRN1-212ENST00000486211 IFFO2Q5TF58 517 aa13.04□□□□□ -0.32
XRN1-212ENST00000486211 LHX8Q68G74 356 aa13.03□□□□□ -0.32
XRN1-212ENST00000486211 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
XRN1-212ENST00000486211 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
XRN1-212ENST00000486211 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.33
XRN1-212ENST00000486211 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
XRN1-212ENST00000486211 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
XRN1-212ENST00000486211 PRAG1Q86YV5 1406 aa13.01□□□□□ -0.33
XRN1-212ENST00000486211 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
XRN1-212ENST00000486211 DISP2A7MBM2 1401 aa13□□□□□ -0.33
XRN1-212ENST00000486211 POTEIP0CG38 1075 aa13□□□□□ -0.33
XRN1-212ENST00000486211 VPS72Q15906 364 aa13□□□□□ -0.33
XRN1-212ENST00000486211 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
XRN1-212ENST00000486211 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
XRN1-212ENST00000486211 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
XRN1-212ENST00000486211 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
XRN1-212ENST00000486211 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
XRN1-212ENST00000486211 NWD2Q9ULI1 1742 aa12.97□□□□□ -0.33
XRN1-212ENST00000486211 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
XRN1-212ENST00000486211 FOXO3O43524 673 aa12.97□□□□□ -0.33
XRN1-212ENST00000486211 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
XRN1-212ENST00000486211 CDC42BPGQ6DT37 1551 aa12.97□□□□□ -0.33
XRN1-212ENST00000486211 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
XRN1-212ENST00000486211 SPATA31A3Q5VYP0 1347 aa12.95□□□□□ -0.34
XRN1-212ENST00000486211 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
XRN1-212ENST00000486211 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
XRN1-212ENST00000486211 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
XRN1-212ENST00000486211 LRPPRCP42704 1394 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms