RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 NUDT7P0C024 238 aa11.13□□□□□ -0.63
SND1-205ENST00000467238 CROCC2H7BZ55 1655 aa11.13□□□□□ -0.63
SND1-205ENST00000467238 DNMT1P26358 1616 aaKnown RBP11.13□□□□□ -0.63
SND1-205ENST00000467238 EIF2AK4Q9P2K8 1649 aaKnown RBP11.13□□□□□ -0.63
SND1-205ENST00000467238 POLR1AO95602 1720 aaPredicted RBP11.12□□□□□ -0.63
SND1-205ENST00000467238 TSPY4P0CV99 314 aa11.12□□□□□ -0.63
SND1-205ENST00000467238 TSPY10P0CW01 314 aa11.12□□□□□ -0.63
SND1-205ENST00000467238 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
SND1-205ENST00000467238 PZPP20742 1482 aa11.12□□□□□ -0.63
SND1-205ENST00000467238 TCOF1Q13428 1488 aaKnown RBP11.12□□□□□ -0.63
SND1-205ENST00000467238 ZC3H13Q5T200 1668 aaKnown RBP11.11□□□□□ -0.63
SND1-205ENST00000467238 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
SND1-205ENST00000467238 PTPN23Q9H3S7 1636 aa11.1□□□□□ -0.63
SND1-205ENST00000467238 CEP152O94986 1710 aa11.1□□□□□ -0.63
SND1-205ENST00000467238 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
SND1-205ENST00000467238 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
SND1-205ENST00000467238 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
SND1-205ENST00000467238 IQSEC2Q5JU85 1478 aa11.08□□□□□ -0.64
SND1-205ENST00000467238 TNRQ92752 1358 aa11.08□□□□□ -0.64
SND1-205ENST00000467238 PKD2Q13563 968 aa11.08□□□□□ -0.64
SND1-205ENST00000467238 FBXO31Q5XUX0 539 aaPredicted RBP11.08□□□□□ -0.64
SND1-205ENST00000467238 ABCC3O15438 1527 aa11.08□□□□□ -0.64
SND1-205ENST00000467238 WASHC2CQ9Y4E1 1318 aa11.08□□□□□ -0.64
SND1-205ENST00000467238 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
SND1-205ENST00000467238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
SND1-205ENST00000467238 KIF3CO14782 793 aa11.07□□□□□ -0.64
SND1-205ENST00000467238 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
SND1-205ENST00000467238 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
SND1-205ENST00000467238 NEURL4Q96JN8 1562 aa11.07□□□□□ -0.64
SND1-205ENST00000467238 SPATA31D1Q6ZQQ2 1576 aa11.06□□□□□ -0.64
SND1-205ENST00000467238 NLRP1Q9C000 1473 aa11.06□□□□□ -0.64
SND1-205ENST00000467238 ABCC5O15440 1437 aa11.05□□□□□ -0.64
SND1-205ENST00000467238 ADGRD1Q6QNK2 874 aa11.05□□□□□ -0.64
SND1-205ENST00000467238 PRDM15P57071 1507 aaPredicted RBP11.04□□□□□ -0.64
SND1-205ENST00000467238 FGD6Q6ZV73 1430 aa11.04□□□□□ -0.64
SND1-205ENST00000467238 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
SND1-205ENST00000467238 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
SND1-205ENST00000467238 ZNF335Q9H4Z2 1342 aaPredicted RBP11.04□□□□□ -0.64
SND1-205ENST00000467238 UGGT1Q9NYU2 1555 aa11.03□□□□□ -0.64
SND1-205ENST00000467238 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
SND1-205ENST00000467238 DAPK1P53355 1430 aa11.02□□□□□ -0.64
SND1-205ENST00000467238 ERBINQ96RT1 1412 aa11.02□□□□□ -0.64
SND1-205ENST00000467238 ERVK-7P63135 1459 aa11.02□□□□□ -0.65
SND1-205ENST00000467238 UBR1Q8IWV7 1749 aa11.02□□□□□ -0.65
SND1-205ENST00000467238 C2orf72A6NCS6 295 aa11.02□□□□□ -0.65
SND1-205ENST00000467238 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
SND1-205ENST00000467238 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
SND1-205ENST00000467238 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
SND1-205ENST00000467238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.65
SND1-205ENST00000467238 THEMISQ8N1K5 641 aaPredicted RBP11□□□□□ -0.65
SND1-205ENST00000467238 MED14O60244 1454 aa11□□□□□ -0.65
SND1-205ENST00000467238 HRO43593 1189 aa10.99□□□□□ -0.65
SND1-205ENST00000467238 ARHGAP31Q2M1Z3 1444 aa10.99□□□□□ -0.65
SND1-205ENST00000467238 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
SND1-205ENST00000467238 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
SND1-205ENST00000467238 ARHGAP33O14559 1287 aa10.98□□□□□ -0.65
SND1-205ENST00000467238 SLC34A2O95436 690 aa10.98□□□□□ -0.65
SND1-205ENST00000467238 ANKLE2Q86XL3 938 aa10.98□□□□□ -0.65
SND1-205ENST00000467238 RRP7BPQ9NSQ0 103 aa10.98□□□□□ -0.65
SND1-205ENST00000467238 CPS1P31327 1500 aa10.98□□□□□ -0.65
SND1-205ENST00000467238 NPHP4O75161 1426 aaPredicted RBP10.97□□□□□ -0.65
SND1-205ENST00000467238 ADGRL2O95490 1459 aa10.97□□□□□ -0.65
SND1-205ENST00000467238 LMTK2Q8IWU2 1503 aa10.96□□□□□ -0.65
SND1-205ENST00000467238 ANKRD30AQ9BXX3 1397 aa10.96□□□□□ -0.65
SND1-205ENST00000467238 NLRP6P59044 892 aa10.96□□□□□ -0.65
SND1-205ENST00000467238 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.65
SND1-205ENST00000467238 KDM5AP29375 1690 aaKnown RBP10.95□□□□□ -0.66
SND1-205ENST00000467238 PIK3C2BO00750 1634 aa10.95□□□□□ -0.66
SND1-205ENST00000467238 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
SND1-205ENST00000467238 SLIT1O75093 1534 aa10.94□□□□□ -0.66
SND1-205ENST00000467238 UBAP1LF5GYI3 381 aa10.94□□□□□ -0.66
SND1-205ENST00000467238 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
SND1-205ENST00000467238 ARHGAP23Q9P227 1491 aa10.93□□□□□ -0.66
SND1-205ENST00000467238 MYO5BQ9ULV0 1848 aa10.93□□□□□ -0.66
SND1-205ENST00000467238 KANK1Q14678 1352 aa10.93□□□□□ -0.66
SND1-205ENST00000467238 SYNMO15061 1565 aa10.93□□□□□ -0.66
SND1-205ENST00000467238 EFCAB6Q5THR3 1501 aa10.93□□□□□ -0.66
SND1-205ENST00000467238 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
SND1-205ENST00000467238 TK2O00142 265 aa10.92□□□□□ -0.66
SND1-205ENST00000467238 PSEN2P49810 448 aa10.92□□□□□ -0.66
SND1-205ENST00000467238 KCTD12Q96CX2 325 aaKnown RBP10.92□□□□□ -0.66
SND1-205ENST00000467238 MFRPQ9BY79 579 aa10.92□□□□□ -0.66
SND1-205ENST00000467238 XIRP1Q702N8 1843 aaKnown RBP10.92□□□□□ -0.66
SND1-205ENST00000467238 GCC2Q8IWJ2 1684 aa10.91□□□□□ -0.66
SND1-205ENST00000467238 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.66
SND1-205ENST00000467238 TET3O43151 1660 aa10.9□□□□□ -0.66
SND1-205ENST00000467238 FAM50AQ14320 339 aaKnown RBP10.9□□□□□ -0.66
SND1-205ENST00000467238 ALKQ9UM73 1620 aa10.9□□□□□ -0.66
SND1-205ENST00000467238 NOS1P29475 1434 aa10.9□□□□□ -0.66
SND1-205ENST00000467238 ANKRD50Q9ULJ7 1429 aa10.9□□□□□ -0.66
SND1-205ENST00000467238 LTKP29376 864 aa10.89□□□□□ -0.67
SND1-205ENST00000467238 UNC13BO14795 1591 aa10.89□□□□□ -0.67
SND1-205ENST00000467238 LRRC7Q96NW7 1537 aa10.89□□□□□ -0.67
SND1-205ENST00000467238 ADGRB3O60242 1522 aa10.88□□□□□ -0.67
SND1-205ENST00000467238 TMEM2Q9UHN6 1383 aa10.88□□□□□ -0.67
SND1-205ENST00000467238 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
SND1-205ENST00000467238 TOM1O60784 492 aa10.87□□□□□ -0.67
SND1-205ENST00000467238 IDI1Q13907 227 aa10.87□□□□□ -0.67
SND1-205ENST00000467238 TXNDC2Q86VQ3 553 aa10.87□□□□□ -0.67
SND1-205ENST00000467238 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms