RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 PXYLP1Q8TE99 480 aa16.61■□□□□ 0.25
LINC01090-202ENST00000434418 EYA1Q99502 592 aa16.61■□□□□ 0.25
LINC01090-202ENST00000434418 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
LINC01090-202ENST00000434418 FAM9AQ8IZU1 332 aaPredicted RBP16.6■□□□□ 0.25
LINC01090-202ENST00000434418 COL17A1Q9UMD9 1497 aaPredicted RBP16.6■□□□□ 0.25
LINC01090-202ENST00000434418 SAMD9Q5K651 1589 aa16.6■□□□□ 0.25
LINC01090-202ENST00000434418 PCDH10Q9P2E7 1040 aa16.59■□□□□ 0.25
LINC01090-202ENST00000434418 TEX14Q8IWB6 1497 aa16.59■□□□□ 0.25
LINC01090-202ENST00000434418 RANGAP1P46060 587 aaPredicted RBP16.58■□□□□ 0.24
LINC01090-202ENST00000434418 RBM46Q8TBY0 533 aaKnown RBP16.58■□□□□ 0.24
LINC01090-202ENST00000434418 EEA1Q15075 1411 aa16.58■□□□□ 0.24
LINC01090-202ENST00000434418 OATP04181 439 aa16.57■□□□□ 0.24
LINC01090-202ENST00000434418 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
LINC01090-202ENST00000434418 AK7Q96M32 723 aa16.57■□□□□ 0.24
LINC01090-202ENST00000434418 CFAP43Q8NDM7 1665 aa16.55■□□□□ 0.24
LINC01090-202ENST00000434418 RCCD1A6NED2 376 aa16.54■□□□□ 0.24
LINC01090-202ENST00000434418 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
LINC01090-202ENST00000434418 TRIM66O15016 1216 aa16.53■□□□□ 0.24
LINC01090-202ENST00000434418 ATP10BO94823 1461 aa16.53■□□□□ 0.24
LINC01090-202ENST00000434418 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
LINC01090-202ENST00000434418 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.24
LINC01090-202ENST00000434418 LAPTM4BQ86VI4 370 aa16.51■□□□□ 0.23
LINC01090-202ENST00000434418 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
LINC01090-202ENST00000434418 FHOD3Q2V2M9 1422 aa16.51■□□□□ 0.23
LINC01090-202ENST00000434418 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
LINC01090-202ENST00000434418 KIF21BO75037 1637 aa16.5■□□□□ 0.23
LINC01090-202ENST00000434418 ZFRQ96KR1 1074 aaKnown RBP16.5■□□□□ 0.23
LINC01090-202ENST00000434418 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
LINC01090-202ENST00000434418 DNAJB2P25686 324 aa16.48■□□□□ 0.23
LINC01090-202ENST00000434418 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
LINC01090-202ENST00000434418 SPNS2Q8IVW8 549 aa16.47■□□□□ 0.23
LINC01090-202ENST00000434418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
LINC01090-202ENST00000434418 NUP153P49790 1475 aaKnown RBP16.46■□□□□ 0.23
LINC01090-202ENST00000434418 AMHR2Q16671 573 aa16.45■□□□□ 0.22
LINC01090-202ENST00000434418 SWT1Q5T5J6 900 aaKnown RBP16.45■□□□□ 0.22
LINC01090-202ENST00000434418 SAMD7Q7Z3H4 446 aa16.45■□□□□ 0.22
LINC01090-202ENST00000434418 TMEM134Q9H6X4 195 aa16.45■□□□□ 0.22
LINC01090-202ENST00000434418 ABCA9Q8IUA7 1624 aa16.45■□□□□ 0.22
LINC01090-202ENST00000434418 PDE4DQ08499 809 aa16.44■□□□□ 0.22
LINC01090-202ENST00000434418 REPIN1Q9BWE0 567 aaKnown RBP16.44■□□□□ 0.22
LINC01090-202ENST00000434418 GOLGA8CPA6NN73 597 aa16.43■□□□□ 0.22
LINC01090-202ENST00000434418 EFCAB5A4FU69 1503 aa16.42■□□□□ 0.22
LINC01090-202ENST00000434418 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
LINC01090-202ENST00000434418 PARP9Q8IXQ6 854 aa16.41■□□□□ 0.22
LINC01090-202ENST00000434418 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
LINC01090-202ENST00000434418 WNT2BQ93097 391 aa16.4■□□□□ 0.22
LINC01090-202ENST00000434418 KCTD12Q96CX2 325 aaKnown RBP16.4■□□□□ 0.22
LINC01090-202ENST00000434418 BCAMP50895 628 aa16.39■□□□□ 0.21
LINC01090-202ENST00000434418 ANKK1Q8NFD2 765 aa16.39■□□□□ 0.21
LINC01090-202ENST00000434418 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
LINC01090-202ENST00000434418 TMUB1Q9BVT8 246 aa16.37■□□□□ 0.21
LINC01090-202ENST00000434418 GPBP1L1Q9HC44 474 aaPredicted RBP16.37■□□□□ 0.21
LINC01090-202ENST00000434418 RNF40O75150 1001 aa16.36■□□□□ 0.21
LINC01090-202ENST00000434418 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
LINC01090-202ENST00000434418 LRCH3Q96II8 777 aa16.36■□□□□ 0.21
LINC01090-202ENST00000434418 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
LINC01090-202ENST00000434418 DAXXQ9UER7 740 aaPredicted RBP16.36■□□□□ 0.21
LINC01090-202ENST00000434418 CLCN1P35523 988 aa16.35■□□□□ 0.21
LINC01090-202ENST00000434418 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.35■□□□□ 0.21
LINC01090-202ENST00000434418 CDK13Q14004 1512 aaKnown RBP16.35■□□□□ 0.21
LINC01090-202ENST00000434418 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
LINC01090-202ENST00000434418 SOWAHBA6NEL2 793 aa16.33■□□□□ 0.2
LINC01090-202ENST00000434418 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
LINC01090-202ENST00000434418 THSD4Q6ZMP0 1018 aa16.32■□□□□ 0.2
LINC01090-202ENST00000434418 FRMPD1Q5SYB0 1578 aa16.31■□□□□ 0.2
LINC01090-202ENST00000434418 NEO1Q92859 1461 aa16.31■□□□□ 0.2
LINC01090-202ENST00000434418 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
LINC01090-202ENST00000434418 RAPGEF3O95398 923 aa16.31■□□□□ 0.2
LINC01090-202ENST00000434418 HDGFP51858 240 aaKnown RBP16.31■□□□□ 0.2
LINC01090-202ENST00000434418 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
LINC01090-202ENST00000434418 TTC37Q6PGP7 1564 aa16.3■□□□□ 0.2
LINC01090-202ENST00000434418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC01090-202ENST00000434418 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
LINC01090-202ENST00000434418 DDX11L8A8MPP1 907 aa16.3■□□□□ 0.2
LINC01090-202ENST00000434418 RNF166Q96A37 237 aaPredicted RBP16.3■□□□□ 0.2
LINC01090-202ENST00000434418 MMRN1Q13201 1228 aa16.29■□□□□ 0.2
LINC01090-202ENST00000434418 FAM217BQ9NTX9 383 aaPredicted RBP16.29■□□□□ 0.2
LINC01090-202ENST00000434418 HPS5Q9UPZ3 1129 aa16.29■□□□□ 0.2
LINC01090-202ENST00000434418 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
LINC01090-202ENST00000434418 SLC10A3P09131 477 aa16.28■□□□□ 0.2
LINC01090-202ENST00000434418 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
LINC01090-202ENST00000434418 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
LINC01090-202ENST00000434418 MS4A1P11836 297 aa16.27■□□□□ 0.2
LINC01090-202ENST00000434418 ATP1B4Q9UN42 357 aaPredicted RBP16.27■□□□□ 0.2
LINC01090-202ENST00000434418 KDM4CQ9H3R0 1056 aa16.26■□□□□ 0.19
LINC01090-202ENST00000434418 FANCAO15360 1455 aa16.26■□□□□ 0.19
LINC01090-202ENST00000434418 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
LINC01090-202ENST00000434418 CFAP74Q9C0B2 1584 aa16.25■□□□□ 0.19
LINC01090-202ENST00000434418 HECW2Q9P2P5 1572 aa16.25■□□□□ 0.19
LINC01090-202ENST00000434418 SSTR3P32745 418 aaPredicted RBP16.24■□□□□ 0.19
LINC01090-202ENST00000434418 PTPN5P54829 565 aa16.24■□□□□ 0.19
LINC01090-202ENST00000434418 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
LINC01090-202ENST00000434418 WBP1LQ9NX94 342 aa16.24■□□□□ 0.19
LINC01090-202ENST00000434418 RICTORQ6R327 1708 aa16.24■□□□□ 0.19
LINC01090-202ENST00000434418 AKNAQ7Z591 1439 aa16.22■□□□□ 0.19
LINC01090-202ENST00000434418 SULF1Q8IWU6 871 aa16.22■□□□□ 0.19
LINC01090-202ENST00000434418 TSR3Q9UJK0 312 aaKnown RBP16.22■□□□□ 0.19
LINC01090-202ENST00000434418 LRRIQ1Q96JM4 1722 aa16.22■□□□□ 0.19
LINC01090-202ENST00000434418 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
LINC01090-202ENST00000434418 CD46P15529 392 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms