RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 DEPDC5O75140 1603 aa8.87□□□□□ -0.99
NIPAL3-205ENST00000432012 MS4A1P11836 297 aa8.87□□□□□ -0.99
NIPAL3-205ENST00000432012 PRKAR2AP13861 404 aaKnown RBP8.87□□□□□ -0.99
NIPAL3-205ENST00000432012 FAM135BQ49AJ0 1406 aa8.87□□□□□ -0.99
NIPAL3-205ENST00000432012 DNMT1P26358 1616 aaKnown RBP8.87□□□□□ -0.99
NIPAL3-205ENST00000432012 MED14O60244 1454 aa8.87□□□□□ -0.99
NIPAL3-205ENST00000432012 PDAP1Q13442 181 aaKnown RBP8.86□□□□□ -0.99
NIPAL3-205ENST00000432012 ZNF772Q68DY9 489 aaPredicted RBP8.86□□□□□ -0.99
NIPAL3-205ENST00000432012 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
NIPAL3-205ENST00000432012 CDK13Q14004 1512 aaKnown RBP8.86□□□□□ -0.99
NIPAL3-205ENST00000432012 CRISPLD2Q9H0B8 497 aa8.86□□□□□ -0.99
NIPAL3-205ENST00000432012 LRRC7Q96NW7 1537 aa8.85□□□□□ -0.99
NIPAL3-205ENST00000432012 ANKLE2Q86XL3 938 aa8.85□□□□□ -0.99
NIPAL3-205ENST00000432012 DPYSL4O14531 572 aa8.85□□□□□ -0.99
NIPAL3-205ENST00000432012 PDE4CQ08493 712 aa8.85□□□□□ -0.99
NIPAL3-205ENST00000432012 CWC22Q9HCG8 908 aaKnown RBP8.85□□□□□ -0.99
NIPAL3-205ENST00000432012 TTLL12Q14166 644 aaPredicted RBP8.84□□□□□ -0.99
NIPAL3-205ENST00000432012 MFSD10Q14728 455 aa8.84□□□□□ -0.99
NIPAL3-205ENST00000432012 CAMK2BQ13554 666 aa8.84□□□□□ -0.99
NIPAL3-205ENST00000432012 PLSCR2Q9NRY7 297 aa8.84□□□□□ -0.99
NIPAL3-205ENST00000432012 ARIH1Q9Y4X5 557 aaPredicted RBP8.84□□□□□ -0.99
NIPAL3-205ENST00000432012 CEP162Q5TB80 1403 aa8.84□□□□□ -0.99
NIPAL3-205ENST00000432012 CCDC61Q9Y6R9 512 aa8.83□□□□□ -1
NIPAL3-205ENST00000432012 NPHP4O75161 1426 aaPredicted RBP8.83□□□□□ -1
NIPAL3-205ENST00000432012 PSEN1P49768 467 aa8.83□□□□□ -1
NIPAL3-205ENST00000432012 CLTCQ00610 1675 aaKnown RBP8.83□□□□□ -1
NIPAL3-205ENST00000432012 LRRC9Q6ZRR7 1453 aa8.83□□□□□ -1
NIPAL3-205ENST00000432012 CABP2Q9NPB3 220 aa8.82□□□□□ -1
NIPAL3-205ENST00000432012 ZRANB1Q9UGI0 708 aa8.82□□□□□ -1
NIPAL3-205ENST00000432012 SERPINA10Q9UK55 444 aa8.82□□□□□ -1
NIPAL3-205ENST00000432012 IRF6O14896 467 aa8.82□□□□□ -1
NIPAL3-205ENST00000432012 IQGAP1P46940 1657 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 E9PSI1 815 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 AMHR2Q16671 573 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 ARHGAP5Q13017 1502 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 KDM5DQ9BY66 1539 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 THEMISQ8N1K5 641 aaPredicted RBP8.81□□□□□ -1
NIPAL3-205ENST00000432012 AFAP1Q8N556 730 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 MS4A4AQ96JQ5 239 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 FAM135AQ9P2D6 1515 aa8.81□□□□□ -1
NIPAL3-205ENST00000432012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.8□□□□□ -1
NIPAL3-205ENST00000432012 PPM1GO15355 546 aaPredicted RBP8.8□□□□□ -1
NIPAL3-205ENST00000432012 ZNF467Q7Z7K2 595 aaPredicted RBP8.8□□□□□ -1
NIPAL3-205ENST00000432012 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
NIPAL3-205ENST00000432012 JCADQ9P266 1359 aa8.8□□□□□ -1
NIPAL3-205ENST00000432012 PRXQ9BXM0 1461 aa8.79□□□□□ -1
NIPAL3-205ENST00000432012 KIDINS220Q9ULH0 1771 aa8.79□□□□□ -1
NIPAL3-205ENST00000432012 PDE4AP27815 886 aa8.79□□□□□ -1
NIPAL3-205ENST00000432012 KIF14Q15058 1648 aa8.79□□□□□ -1
NIPAL3-205ENST00000432012 PROCA1Q8NCQ7 364 aaPredicted RBP8.79□□□□□ -1
NIPAL3-205ENST00000432012 ITSN2Q9NZM3 1697 aa8.78□□□□□ -1
NIPAL3-205ENST00000432012 RXRBP28702 533 aa8.78□□□□□ -1
NIPAL3-205ENST00000432012 GIGYF2Q6Y7W6 1299 aaKnown RBP8.78□□□□□ -1
NIPAL3-205ENST00000432012 IFNL1Q8IU54 200 aa8.78□□□□□ -1
NIPAL3-205ENST00000432012 IFFO2Q5TF58 517 aa8.78□□□□□ -1
NIPAL3-205ENST00000432012 NLRP1Q9C000 1473 aa8.78□□□□□ -1
NIPAL3-205ENST00000432012 SPATA31A6Q5VVP1 1343 aa8.78□□□□□ -1
NIPAL3-205ENST00000432012 MAP2K5Q13163 448 aa8.77□□□□□ -1.01
NIPAL3-205ENST00000432012 EEA1Q15075 1411 aa8.77□□□□□ -1.01
NIPAL3-205ENST00000432012 MAP3K13O43283 966 aa8.77□□□□□ -1.01
NIPAL3-205ENST00000432012 COG6Q9Y2V7 657 aa8.77□□□□□ -1.01
NIPAL3-205ENST00000432012 ABCC1P33527 1531 aa8.77□□□□□ -1.01
NIPAL3-205ENST00000432012 NUTM2FA1L443 756 aa8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 FBXO31Q5XUX0 539 aaPredicted RBP8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 STRCP1A6NGW2 1772 aa8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 TNRQ92752 1358 aa8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 TRIM52Q96A61 297 aa8.76□□□□□ -1.01
NIPAL3-205ENST00000432012 PCMTD1Q96MG8 357 aaPredicted RBP8.75□□□□□ -1.01
NIPAL3-205ENST00000432012 CLIP1P30622 1438 aa8.75□□□□□ -1.01
NIPAL3-205ENST00000432012 FGD6Q6ZV73 1430 aa8.75□□□□□ -1.01
NIPAL3-205ENST00000432012 NLRP6P59044 892 aa8.75□□□□□ -1.01
NIPAL3-205ENST00000432012 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
NIPAL3-205ENST00000432012 PLXNC1O60486 1568 aa8.75□□□□□ -1.01
NIPAL3-205ENST00000432012 ROBO1Q9Y6N7 1651 aa8.74□□□□□ -1.01
NIPAL3-205ENST00000432012 SNRKQ9NRH2 765 aa8.74□□□□□ -1.01
NIPAL3-205ENST00000432012 ATP7AQ04656 1500 aa8.74□□□□□ -1.01
NIPAL3-205ENST00000432012 LRP5O75197 1615 aa8.74□□□□□ -1.01
NIPAL3-205ENST00000432012 GRXCR2A6NFK2 248 aa8.74□□□□□ -1.01
NIPAL3-205ENST00000432012 MEX3CQ5U5Q3 659 aaKnown RBP8.74□□□□□ -1.01
NIPAL3-205ENST00000432012 RBM33Q96EV2 1170 aaKnown RBP8.74□□□□□ -1.01
NIPAL3-205ENST00000432012 PHLPP1O60346 1717 aa8.73□□□□□ -1.01
NIPAL3-205ENST00000432012 UNCXA6NJT0 531 aa8.73□□□□□ -1.01
NIPAL3-205ENST00000432012 CHRDL2Q6WN34 429 aa8.73□□□□□ -1.01
NIPAL3-205ENST00000432012 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
NIPAL3-205ENST00000432012 UGGT1Q9NYU2 1555 aa8.73□□□□□ -1.01
NIPAL3-205ENST00000432012 POLR3EQ9NVU0 708 aa8.73□□□□□ -1.01
NIPAL3-205ENST00000432012 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
NIPAL3-205ENST00000432012 ATAD2Q6PL18 1390 aa8.72□□□□□ -1.01
NIPAL3-205ENST00000432012 TMED8Q6PL24 325 aaPredicted RBP8.72□□□□□ -1.01
NIPAL3-205ENST00000432012 CCDC125Q86Z20 511 aa8.72□□□□□ -1.01
NIPAL3-205ENST00000432012 PREX2Q70Z35 1606 aa8.72□□□□□ -1.01
NIPAL3-205ENST00000432012 A2MP01023 1474 aa8.72□□□□□ -1.01
NIPAL3-205ENST00000432012 PZPP20742 1482 aa8.72□□□□□ -1.01
NIPAL3-205ENST00000432012 XIRP1Q702N8 1843 aaKnown RBP8.71□□□□□ -1.01
NIPAL3-205ENST00000432012 CDC42BPBQ9Y5S2 1711 aa8.71□□□□□ -1.01
NIPAL3-205ENST00000432012 ZC3H13Q5T200 1668 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms