RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
NIPAL3-205ENST00000432012 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
NIPAL3-205ENST00000432012 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
NIPAL3-205ENST00000432012 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-205ENST00000432012 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
NIPAL3-205ENST00000432012 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
NIPAL3-205ENST00000432012 NISCHQ9Y2I1 1504 aa13.46□□□□□ -0.25
NIPAL3-205ENST00000432012 KCNA4P22459 653 aa13.08□□□□□ -0.32
NIPAL3-205ENST00000432012 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
NIPAL3-205ENST00000432012 ADRA2BP18089 450 aa12.99□□□□□ -0.33
NIPAL3-205ENST00000432012 FOXD1Q16676 465 aa12.97□□□□□ -0.33
NIPAL3-205ENST00000432012 ABCC9O60706 1549 aa12.95□□□□□ -0.34
NIPAL3-205ENST00000432012 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
NIPAL3-205ENST00000432012 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
NIPAL3-205ENST00000432012 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
NIPAL3-205ENST00000432012 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
NIPAL3-205ENST00000432012 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.4
NIPAL3-205ENST00000432012 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-205ENST00000432012 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-205ENST00000432012 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
NIPAL3-205ENST00000432012 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
NIPAL3-205ENST00000432012 ZBTB22O15209 634 aa12.17□□□□□ -0.46
NIPAL3-205ENST00000432012 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
NIPAL3-205ENST00000432012 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
NIPAL3-205ENST00000432012 NACADO15069 1562 aa11.98□□□□□ -0.49
NIPAL3-205ENST00000432012 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
NIPAL3-205ENST00000432012 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
NIPAL3-205ENST00000432012 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
NIPAL3-205ENST00000432012 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
NIPAL3-205ENST00000432012 SHROOM4Q9ULL8 1493 aa11.8□□□□□ -0.52
NIPAL3-205ENST00000432012 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
NIPAL3-205ENST00000432012 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
NIPAL3-205ENST00000432012 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
NIPAL3-205ENST00000432012 PRKCSHP14314 528 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-205ENST00000432012 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.54
NIPAL3-205ENST00000432012 CUX2O14529 1486 aa11.65□□□□□ -0.54
NIPAL3-205ENST00000432012 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
NIPAL3-205ENST00000432012 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
NIPAL3-205ENST00000432012 MSH5O43196 834 aa11.57□□□□□ -0.56
NIPAL3-205ENST00000432012 EIF4G1Q04637 1599 aaKnown RBP11.56□□□□□ -0.56
NIPAL3-205ENST00000432012 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-205ENST00000432012 FKBP8Q14318 412 aa11.51□□□□□ -0.57
NIPAL3-205ENST00000432012 DCAF8L2P0C7V8 631 aa11.47□□□□□ -0.57
NIPAL3-205ENST00000432012 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
NIPAL3-205ENST00000432012 DAXXQ9UER7 740 aaPredicted RBP11.37□□□□□ -0.59
NIPAL3-205ENST00000432012 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
NIPAL3-205ENST00000432012 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
NIPAL3-205ENST00000432012 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
NIPAL3-205ENST00000432012 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
NIPAL3-205ENST00000432012 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
NIPAL3-205ENST00000432012 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.61
NIPAL3-205ENST00000432012 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
NIPAL3-205ENST00000432012 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-205ENST00000432012 TIMELESSQ9UNS1 1208 aa11.18□□□□□ -0.62
NIPAL3-205ENST00000432012 DMRT2Q9Y5R5 561 aa11.15□□□□□ -0.63
NIPAL3-205ENST00000432012 TPRNQ4KMQ1 711 aa11.14□□□□□ -0.63
NIPAL3-205ENST00000432012 BCANQ96GW7 911 aa11.13□□□□□ -0.63
NIPAL3-205ENST00000432012 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-205ENST00000432012 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
NIPAL3-205ENST00000432012 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-205ENST00000432012 NCAPD3P42695 1498 aa11.02□□□□□ -0.65
NIPAL3-205ENST00000432012 ZCCHC6Q5VYS8 1495 aaKnown RBP11.01□□□□□ -0.65
NIPAL3-205ENST00000432012 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
NIPAL3-205ENST00000432012 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
NIPAL3-205ENST00000432012 FBLN2P98095 1184 aa10.92□□□□□ -0.66
NIPAL3-205ENST00000432012 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
NIPAL3-205ENST00000432012 LAMC3Q9Y6N6 1575 aa10.92□□□□□ -0.66
NIPAL3-205ENST00000432012 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
NIPAL3-205ENST00000432012 HMGXB3Q12766 1538 aa10.91□□□□□ -0.66
NIPAL3-205ENST00000432012 NESP48681 1621 aa10.88□□□□□ -0.67
NIPAL3-205ENST00000432012 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
NIPAL3-205ENST00000432012 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
NIPAL3-205ENST00000432012 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
NIPAL3-205ENST00000432012 DCAF8L1A6NGE4 600 aa10.82□□□□□ -0.68
NIPAL3-205ENST00000432012 RIMBP3CA6NJZ7 1639 aa10.82□□□□□ -0.68
NIPAL3-205ENST00000432012 RIMBP3BA6NNM3 1639 aa10.82□□□□□ -0.68
NIPAL3-205ENST00000432012 RIMBP3Q9UFD9 1639 aa10.82□□□□□ -0.68
NIPAL3-205ENST00000432012 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
NIPAL3-205ENST00000432012 ARXQ96QS3 562 aa10.81□□□□□ -0.68
NIPAL3-205ENST00000432012 VSIG10Q8N0Z9 540 aa10.79□□□□□ -0.68
NIPAL3-205ENST00000432012 WDR62O43379 1518 aa10.78□□□□□ -0.68
NIPAL3-205ENST00000432012 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
NIPAL3-205ENST00000432012 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
NIPAL3-205ENST00000432012 ATF5Q9Y2D1 282 aaPredicted RBP10.74□□□□□ -0.69
NIPAL3-205ENST00000432012 TRHP20396 242 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-205ENST00000432012 ATXN8OSP0DMR3 200 aa10.71□□□□□ -0.69
NIPAL3-205ENST00000432012 ARHGEF11O15085 1522 aa10.71□□□□□ -0.7
NIPAL3-205ENST00000432012 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-205ENST00000432012 GTF3C3Q9Y5Q9 886 aa10.66□□□□□ -0.7
NIPAL3-205ENST00000432012 PKD2Q13563 968 aa10.66□□□□□ -0.7
NIPAL3-205ENST00000432012 SMARCA4P51532 1647 aa10.65□□□□□ -0.7
NIPAL3-205ENST00000432012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIPAL3-205ENST00000432012 PEG3Q9GZU2 1588 aa10.63□□□□□ -0.71
NIPAL3-205ENST00000432012 CADPSQ9ULU8 1353 aa10.61□□□□□ -0.71
NIPAL3-205ENST00000432012 NPM1P06748 294 aaKnown RBP eCLIP10.6□□□□□ -0.71
NIPAL3-205ENST00000432012 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-205ENST00000432012 PAXIP1Q6ZW49 1069 aaPredicted RBP10.6□□□□□ -0.71
NIPAL3-205ENST00000432012 CFAP44Q96MT7 982 aa10.59□□□□□ -0.71
NIPAL3-205ENST00000432012 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
NIPAL3-205ENST00000432012 CYB5RLQ6IPT4 315 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 1044.3 ms