RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PPP4R2Q9NY27 417 aa11.85□□□□□ -0.51
GABPB1-205ENST00000429662 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
GABPB1-205ENST00000429662 KIF7Q2M1P5 1343 aa11.85□□□□□ -0.51
GABPB1-205ENST00000429662 KIF3BO15066 747 aa11.84□□□□□ -0.51
GABPB1-205ENST00000429662 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
GABPB1-205ENST00000429662 EIF2AK4Q9P2K8 1649 aaKnown RBP11.84□□□□□ -0.51
GABPB1-205ENST00000429662 CROCC2H7BZ55 1655 aa11.84□□□□□ -0.51
GABPB1-205ENST00000429662 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
GABPB1-205ENST00000429662 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
GABPB1-205ENST00000429662 RGS12O14924 1447 aa11.83□□□□□ -0.52
GABPB1-205ENST00000429662 ANKRD50Q9ULJ7 1429 aa11.83□□□□□ -0.52
GABPB1-205ENST00000429662 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
GABPB1-205ENST00000429662 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
GABPB1-205ENST00000429662 C11orf95C9JLR9 678 aaPredicted RBP11.82□□□□□ -0.52
GABPB1-205ENST00000429662 CCDC141Q6ZP82 1450 aa11.82□□□□□ -0.52
GABPB1-205ENST00000429662 WASHC2CQ9Y4E1 1318 aa11.82□□□□□ -0.52
GABPB1-205ENST00000429662 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
GABPB1-205ENST00000429662 KTN1Q86UP2 1357 aaKnown RBP11.81□□□□□ -0.52
GABPB1-205ENST00000429662 CHD2O14647 1828 aaKnown RBP11.81□□□□□ -0.52
GABPB1-205ENST00000429662 ARHGEF5Q12774 1597 aa11.81□□□□□ -0.52
GABPB1-205ENST00000429662 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
GABPB1-205ENST00000429662 TSPY4P0CV99 314 aa11.8□□□□□ -0.52
GABPB1-205ENST00000429662 TSPY10P0CW01 314 aa11.8□□□□□ -0.52
GABPB1-205ENST00000429662 USP47Q96K76 1375 aa11.8□□□□□ -0.52
GABPB1-205ENST00000429662 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
GABPB1-205ENST00000429662 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
GABPB1-205ENST00000429662 RALGAPBQ86X10 1494 aa11.79□□□□□ -0.52
GABPB1-205ENST00000429662 LHX8Q68G74 356 aa11.79□□□□□ -0.52
GABPB1-205ENST00000429662 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
GABPB1-205ENST00000429662 TMEM2Q9UHN6 1383 aa11.78□□□□□ -0.52
GABPB1-205ENST00000429662 SPATA31A6Q5VVP1 1343 aa11.78□□□□□ -0.52
GABPB1-205ENST00000429662 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
GABPB1-205ENST00000429662 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.52
GABPB1-205ENST00000429662 ARHGAP31Q2M1Z3 1444 aa11.76□□□□□ -0.53
GABPB1-205ENST00000429662 NUP155O75694 1391 aa11.76□□□□□ -0.53
GABPB1-205ENST00000429662 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
GABPB1-205ENST00000429662 KCNA6P17658 529 aa11.76□□□□□ -0.53
GABPB1-205ENST00000429662 ZNF772Q68DY9 489 aaPredicted RBP11.76□□□□□ -0.53
GABPB1-205ENST00000429662 CCDC184Q52MB2 194 aa11.75□□□□□ -0.53
GABPB1-205ENST00000429662 TXNDC2Q86VQ3 553 aa11.75□□□□□ -0.53
GABPB1-205ENST00000429662 KIF15Q9NS87 1388 aa11.75□□□□□ -0.53
GABPB1-205ENST00000429662 NHSL1Q5SYE7 1610 aa11.74□□□□□ -0.53
GABPB1-205ENST00000429662 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
GABPB1-205ENST00000429662 EFCAB6Q5THR3 1501 aa11.74□□□□□ -0.53
GABPB1-205ENST00000429662 LRP5O75197 1615 aa11.74□□□□□ -0.53
GABPB1-205ENST00000429662 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
GABPB1-205ENST00000429662 RALBP1Q15311 655 aa11.73□□□□□ -0.53
GABPB1-205ENST00000429662 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
GABPB1-205ENST00000429662 RXRBP28702 533 aa11.72□□□□□ -0.53
GABPB1-205ENST00000429662 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
GABPB1-205ENST00000429662 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
GABPB1-205ENST00000429662 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
GABPB1-205ENST00000429662 BRD4O60885 1362 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-205ENST00000429662 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.54
GABPB1-205ENST00000429662 MSH6P52701 1360 aa11.7□□□□□ -0.54
GABPB1-205ENST00000429662 CLCN6P51797 869 aa11.7□□□□□ -0.54
GABPB1-205ENST00000429662 ADGRB3O60242 1522 aa11.7□□□□□ -0.54
GABPB1-205ENST00000429662 PROSER2Q86WR7 435 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-205ENST00000429662 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
GABPB1-205ENST00000429662 AFF2P51816 1311 aa11.69□□□□□ -0.54
GABPB1-205ENST00000429662 INSRP06213 1382 aa11.69□□□□□ -0.54
GABPB1-205ENST00000429662 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
GABPB1-205ENST00000429662 PNISRQ8TF01 805 aaKnown RBP11.68□□□□□ -0.54
GABPB1-205ENST00000429662 SLC26A8Q96RN1 970 aa11.68□□□□□ -0.54
GABPB1-205ENST00000429662 MYBBP1AQ9BQG0 1328 aaKnown RBP11.68□□□□□ -0.54
GABPB1-205ENST00000429662 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
GABPB1-205ENST00000429662 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
GABPB1-205ENST00000429662 NCOA3Q9Y6Q9 1424 aa11.67□□□□□ -0.54
GABPB1-205ENST00000429662 LMTK2Q8IWU2 1503 aa11.66□□□□□ -0.54
GABPB1-205ENST00000429662 ASXL1Q8IXJ9 1541 aa11.66□□□□□ -0.54
GABPB1-205ENST00000429662 LRPPRCP42704 1394 aaKnown RBP11.66□□□□□ -0.54
GABPB1-205ENST00000429662 NOS1P29475 1434 aa11.66□□□□□ -0.54
GABPB1-205ENST00000429662 PDE3BQ13370 1112 aa11.66□□□□□ -0.54
GABPB1-205ENST00000429662 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
GABPB1-205ENST00000429662 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.54
GABPB1-205ENST00000429662 CCDC144AA2RUR9 1427 aa11.65□□□□□ -0.54
GABPB1-205ENST00000429662 LAMC1P11047 1609 aa11.65□□□□□ -0.54
GABPB1-205ENST00000429662 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.55
GABPB1-205ENST00000429662 EID1Q9Y6B2 187 aa11.64□□□□□ -0.55
GABPB1-205ENST00000429662 DUOX2Q9NRD8 1548 aa11.64□□□□□ -0.55
GABPB1-205ENST00000429662 UNC13BO14795 1591 aa11.64□□□□□ -0.55
GABPB1-205ENST00000429662 PRAG1Q86YV5 1406 aa11.63□□□□□ -0.55
GABPB1-205ENST00000429662 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
GABPB1-205ENST00000429662 MNX1P50219 401 aaPredicted RBP11.63□□□□□ -0.55
GABPB1-205ENST00000429662 MEX3CQ5U5Q3 659 aaKnown RBP11.63□□□□□ -0.55
GABPB1-205ENST00000429662 STAC3Q96MF2 364 aa11.63□□□□□ -0.55
GABPB1-205ENST00000429662 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
GABPB1-205ENST00000429662 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
GABPB1-205ENST00000429662 ADAMTS13Q76LX8 1427 aa11.62□□□□□ -0.55
GABPB1-205ENST00000429662 TMEM131LA2VDJ0 1609 aa11.62□□□□□ -0.55
GABPB1-205ENST00000429662 RBM6P78332 1123 aaKnown RBP11.62□□□□□ -0.55
GABPB1-205ENST00000429662 IDI1Q13907 227 aa11.62□□□□□ -0.55
GABPB1-205ENST00000429662 BRINP3Q76B58 766 aa11.62□□□□□ -0.55
GABPB1-205ENST00000429662 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
GABPB1-205ENST00000429662 XRN1Q8IZH2 1706 aaKnown RBP11.62□□□□□ -0.55
GABPB1-205ENST00000429662 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
GABPB1-205ENST00000429662 GALR2O43603 387 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-205ENST00000429662 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
GABPB1-205ENST00000429662 PNPLA6Q8IY17 1366 aa11.61□□□□□ -0.55
GABPB1-205ENST00000429662 PLEKHG1Q9ULL1 1385 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms