RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 GOLGA6L22H0YM25 854 aa7.58□□□□□ -1.2
HDAC9-203ENST00000406072 EIF4G2P78344 907 aaKnown RBP eCLIP7.58□□□□□ -1.2
HDAC9-203ENST00000406072 USP32Q8NFA0 1604 aa7.57□□□□□ -1.2
HDAC9-203ENST00000406072 ADGRB2O60241 1585 aa7.57□□□□□ -1.2
HDAC9-203ENST00000406072 SBNO2Q9Y2G9 1366 aa7.56□□□□□ -1.2
HDAC9-203ENST00000406072 RAPGEF3O95398 923 aa7.56□□□□□ -1.2
HDAC9-203ENST00000406072 MYH16Q9H6N6 1097 aa7.56□□□□□ -1.2
HDAC9-203ENST00000406072 A2ML1A8K2U0 1454 aa7.56□□□□□ -1.2
HDAC9-203ENST00000406072 CPS1P31327 1500 aa7.56□□□□□ -1.2
HDAC9-203ENST00000406072 SPRYD3Q8NCJ5 442 aa7.56□□□□□ -1.2
HDAC9-203ENST00000406072 FRAT1Q92837 279 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-203ENST00000406072 SLC52A1Q9NWF4 448 aa7.55□□□□□ -1.2
HDAC9-203ENST00000406072 MED14O60244 1454 aa7.55□□□□□ -1.2
HDAC9-203ENST00000406072 PDE4AP27815 886 aa7.55□□□□□ -1.2
HDAC9-203ENST00000406072 ASXL1Q8IXJ9 1541 aa7.54□□□□□ -1.2
HDAC9-203ENST00000406072 KIF3BO15066 747 aa7.54□□□□□ -1.2
HDAC9-203ENST00000406072 MYOM1P52179 1685 aa7.54□□□□□ -1.2
HDAC9-203ENST00000406072 CEP170BQ9Y4F5 1589 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-203ENST00000406072 NFKBIBQ15653 356 aa7.54□□□□□ -1.2
HDAC9-203ENST00000406072 NWD1Q149M9 1564 aa7.54□□□□□ -1.2
HDAC9-203ENST00000406072 ZBTB7CA1YPR0 619 aa7.54□□□□□ -1.2
HDAC9-203ENST00000406072 FAM43AQ8N2R8 423 aa7.54□□□□□ -1.2
HDAC9-203ENST00000406072 XRN1Q8IZH2 1706 aaKnown RBP7.53□□□□□ -1.2
HDAC9-203ENST00000406072 TECPR2O15040 1411 aa7.53□□□□□ -1.2
HDAC9-203ENST00000406072 PLEKHG5O94827 1062 aa7.53□□□□□ -1.2
HDAC9-203ENST00000406072 FAM13BQ9NYF5 915 aa7.53□□□□□ -1.2
HDAC9-203ENST00000406072 SCAF11Q99590 1463 aaKnown RBP7.53□□□□□ -1.2
HDAC9-203ENST00000406072 KLHL34Q8N239 644 aa7.52□□□□□ -1.21
HDAC9-203ENST00000406072 QRICH2Q9H0J4 1663 aa7.52□□□□□ -1.21
HDAC9-203ENST00000406072 C14orf37Q86TY3 774 aa7.52□□□□□ -1.21
HDAC9-203ENST00000406072 PHF23Q9BUL5 403 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-203ENST00000406072 ALKQ9UM73 1620 aa7.52□□□□□ -1.21
HDAC9-203ENST00000406072 ZMYM3Q14202 1370 aa7.51□□□□□ -1.21
HDAC9-203ENST00000406072 USP54Q70EL1 1684 aa7.51□□□□□ -1.21
HDAC9-203ENST00000406072 RRP9O43818 475 aaKnown RBP7.51□□□□□ -1.21
HDAC9-203ENST00000406072 L3MBTL2Q969R5 705 aa7.51□□□□□ -1.21
HDAC9-203ENST00000406072 TOPAZ1Q8N9V7 1692 aa7.51□□□□□ -1.21
HDAC9-203ENST00000406072 PDE4CQ08493 712 aa7.5□□□□□ -1.21
HDAC9-203ENST00000406072 PUS7Q96PZ0 661 aaKnown RBP7.5□□□□□ -1.21
HDAC9-203ENST00000406072 TNNT3P45378 269 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-203ENST00000406072 WASHC2CQ9Y4E1 1318 aa7.49□□□□□ -1.21
HDAC9-203ENST00000406072 TNRQ92752 1358 aa7.49□□□□□ -1.21
HDAC9-203ENST00000406072 PTPRMP28827 1452 aa7.49□□□□□ -1.21
HDAC9-203ENST00000406072 ROCK2O75116 1388 aaKnown RBP7.49□□□□□ -1.21
HDAC9-203ENST00000406072 PLCB2Q00722 1185 aa7.48□□□□□ -1.21
HDAC9-203ENST00000406072 SIRT1Q96EB6 747 aa7.48□□□□□ -1.21
HDAC9-203ENST00000406072 PLEKHG1Q9ULL1 1385 aa7.48□□□□□ -1.21
HDAC9-203ENST00000406072 ANKRD26Q9UPS8 1709 aa7.48□□□□□ -1.21
HDAC9-203ENST00000406072 WDR43Q15061 677 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC9-203ENST00000406072 LRRC7Q96NW7 1537 aa7.47□□□□□ -1.21
HDAC9-203ENST00000406072 FAM135BQ49AJ0 1406 aa7.47□□□□□ -1.21
HDAC9-203ENST00000406072 PIK3R4Q99570 1358 aa7.47□□□□□ -1.21
HDAC9-203ENST00000406072 EIF3AQ14152 1382 aaKnown RBP7.47□□□□□ -1.21
HDAC9-203ENST00000406072 NBPF8Q3BBV2 869 aa7.47□□□□□ -1.21
HDAC9-203ENST00000406072 NUDCQ9Y266 331 aa7.47□□□□□ -1.21
HDAC9-203ENST00000406072 CHD2O14647 1828 aaKnown RBP7.47□□□□□ -1.21
HDAC9-203ENST00000406072 CHAF1AQ13111 956 aaPredicted RBP7.46□□□□□ -1.21
HDAC9-203ENST00000406072 PTCH1Q13635 1447 aa7.46□□□□□ -1.21
HDAC9-203ENST00000406072 RCAN3Q9UKA8 241 aa7.46□□□□□ -1.21
HDAC9-203ENST00000406072 FRAT2O75474 233 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-203ENST00000406072 KTN1Q86UP2 1357 aaKnown RBP7.46□□□□□ -1.22
HDAC9-203ENST00000406072 HSP90AB1P08238 724 aaKnown RBP7.46□□□□□ -1.22
HDAC9-203ENST00000406072 RIMS2Q9UQ26 1411 aa7.45□□□□□ -1.22
HDAC9-203ENST00000406072 C14orf93Q9H972 538 aaKnown RBP7.45□□□□□ -1.22
HDAC9-203ENST00000406072 USP47Q96K76 1375 aa7.45□□□□□ -1.22
HDAC9-203ENST00000406072 TMEM2Q9UHN6 1383 aa7.45□□□□□ -1.22
HDAC9-203ENST00000406072 SETD1BQ9UPS6 1966 aaKnown RBP7.45□□□□□ -1.22
HDAC9-203ENST00000406072 LMTK3Q96Q04 1460 aa7.45□□□□□ -1.22
HDAC9-203ENST00000406072 HSCBQ8IWL3 235 aa7.45□□□□□ -1.22
HDAC9-203ENST00000406072 ITSN1Q15811 1721 aa7.44□□□□□ -1.22
HDAC9-203ENST00000406072 RBM10P98175 930 aaKnown RBP7.44□□□□□ -1.22
HDAC9-203ENST00000406072 FOXD1Q16676 465 aa7.44□□□□□ -1.22
HDAC9-203ENST00000406072 NINLQ9Y2I6 1382 aa7.44□□□□□ -1.22
HDAC9-203ENST00000406072 AKAP12Q02952 1782 aa7.44□□□□□ -1.22
HDAC9-203ENST00000406072 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.44□□□□□ -1.22
HDAC9-203ENST00000406072 NRKQ7Z2Y5 1582 aa7.44□□□□□ -1.22
HDAC9-203ENST00000406072 INSRP06213 1382 aa7.43□□□□□ -1.22
HDAC9-203ENST00000406072 NPC1L1Q9UHC9 1359 aa7.43□□□□□ -1.22
HDAC9-203ENST00000406072 ADAMTS13Q76LX8 1427 aa7.43□□□□□ -1.22
HDAC9-203ENST00000406072 MON2Q7Z3U7 1717 aa7.43□□□□□ -1.22
HDAC9-203ENST00000406072 CCDC7Q96M83 1385 aa7.43□□□□□ -1.22
HDAC9-203ENST00000406072 MS4A1P11836 297 aa7.43□□□□□ -1.22
HDAC9-203ENST00000406072 EXOC6Q8TAG9 804 aa7.43□□□□□ -1.22
HDAC9-203ENST00000406072 GBP4Q96PP9 640 aa7.42□□□□□ -1.22
HDAC9-203ENST00000406072 MAP7D2Q96T17 732 aa7.42□□□□□ -1.22
HDAC9-203ENST00000406072 LRPPRCP42704 1394 aaKnown RBP7.42□□□□□ -1.22
HDAC9-203ENST00000406072 TULP4Q9NRJ4 1543 aa7.42□□□□□ -1.22
HDAC9-203ENST00000406072 KIAA2012Q0VF49 1180 aa7.42□□□□□ -1.22
HDAC9-203ENST00000406072 VGFO15240 615 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-203ENST00000406072 TPM2P07951 284 aa7.42□□□□□ -1.22
HDAC9-203ENST00000406072 ABCC11Q96J66 1382 aa7.42□□□□□ -1.22
HDAC9-203ENST00000406072 CDC42BPGQ6DT37 1551 aa7.42□□□□□ -1.22
HDAC9-203ENST00000406072 ZNF771Q7L3S4 317 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-203ENST00000406072 NCOA3Q9Y6Q9 1424 aa7.41□□□□□ -1.22
HDAC9-203ENST00000406072 FMN2Q9NZ56 1722 aa7.41□□□□□ -1.22
HDAC9-203ENST00000406072 HSPA5P11021 654 aaKnown RBP7.41□□□□□ -1.22
HDAC9-203ENST00000406072 WASHC2AQ641Q2 1341 aa7.41□□□□□ -1.22
HDAC9-203ENST00000406072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.41□□□□□ -1.22
HDAC9-203ENST00000406072 IDI1Q13907 227 aa7.41□□□□□ -1.22
HDAC9-203ENST00000406072 GGT6Q6P531 493 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms