RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 PDCL3Q9H2J4 239 aa17.04■□□□□ 0.32
SNX12-202ENST00000374274 CFAP74Q9C0B2 1584 aa17.04■□□□□ 0.32
SNX12-202ENST00000374274 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
SNX12-202ENST00000374274 IQGAP1P46940 1657 aa17.02■□□□□ 0.32
SNX12-202ENST00000374274 BCAR3O75815 825 aa17.02■□□□□ 0.31
SNX12-202ENST00000374274 PTMSP20962 102 aa17.02■□□□□ 0.31
SNX12-202ENST00000374274 CD109Q6YHK3 1445 aa17.01■□□□□ 0.31
SNX12-202ENST00000374274 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
SNX12-202ENST00000374274 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
SNX12-202ENST00000374274 TERF1P54274 439 aa16.99■□□□□ 0.31
SNX12-202ENST00000374274 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
SNX12-202ENST00000374274 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
SNX12-202ENST00000374274 TET3O43151 1660 aa16.98■□□□□ 0.31
SNX12-202ENST00000374274 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
SNX12-202ENST00000374274 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
SNX12-202ENST00000374274 KANK1Q14678 1352 aa16.97■□□□□ 0.31
SNX12-202ENST00000374274 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
SNX12-202ENST00000374274 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
SNX12-202ENST00000374274 SKOR2Q2VWA4 1001 aaPredicted RBP16.96■□□□□ 0.31
SNX12-202ENST00000374274 MYOM1P52179 1685 aa16.96■□□□□ 0.31
SNX12-202ENST00000374274 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.31
SNX12-202ENST00000374274 KIF3BO15066 747 aa16.95■□□□□ 0.3
SNX12-202ENST00000374274 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
SNX12-202ENST00000374274 RWDD1Q9H446 243 aaPredicted RBP16.95■□□□□ 0.3
SNX12-202ENST00000374274 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
SNX12-202ENST00000374274 TRPM2O94759 1503 aa16.95■□□□□ 0.3
SNX12-202ENST00000374274 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
SNX12-202ENST00000374274 APAF1O14727 1248 aa16.95■□□□□ 0.3
SNX12-202ENST00000374274 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
SNX12-202ENST00000374274 CALD1Q05682 793 aaKnown RBP16.95■□□□□ 0.3
SNX12-202ENST00000374274 POGZQ7Z3K3 1410 aa16.95■□□□□ 0.3
SNX12-202ENST00000374274 DDIT3P35638 169 aa16.94■□□□□ 0.3
SNX12-202ENST00000374274 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
SNX12-202ENST00000374274 COG6Q9Y2V7 657 aa16.94■□□□□ 0.3
SNX12-202ENST00000374274 MROH1Q8NDA8 1641 aa16.94■□□□□ 0.3
SNX12-202ENST00000374274 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
SNX12-202ENST00000374274 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
SNX12-202ENST00000374274 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
SNX12-202ENST00000374274 C22orf23Q9BZE7 217 aa16.93■□□□□ 0.3
SNX12-202ENST00000374274 PDZRN3Q9UPQ7 1066 aa16.93■□□□□ 0.3
SNX12-202ENST00000374274 PTPRTO14522 1441 aa16.93■□□□□ 0.3
SNX12-202ENST00000374274 MAP7D2Q96T17 732 aa16.93■□□□□ 0.3
SNX12-202ENST00000374274 MADDQ8WXG6 1647 aa16.92■□□□□ 0.3
SNX12-202ENST00000374274 CEP152O94986 1710 aa16.92■□□□□ 0.3
SNX12-202ENST00000374274 CCDC173Q0VFZ6 552 aa16.92■□□□□ 0.3
SNX12-202ENST00000374274 HSCBQ8IWL3 235 aa16.92■□□□□ 0.3
SNX12-202ENST00000374274 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
SNX12-202ENST00000374274 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
SNX12-202ENST00000374274 ARXQ96QS3 562 aa16.92■□□□□ 0.3
SNX12-202ENST00000374274 SNX21Q969T3 373 aa16.91■□□□□ 0.3
SNX12-202ENST00000374274 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
SNX12-202ENST00000374274 HECW2Q9P2P5 1572 aa16.91■□□□□ 0.3
SNX12-202ENST00000374274 NEO1Q92859 1461 aa16.91■□□□□ 0.3
SNX12-202ENST00000374274 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
SNX12-202ENST00000374274 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
SNX12-202ENST00000374274 GBP4Q96PP9 640 aa16.91■□□□□ 0.3
SNX12-202ENST00000374274 PPP1R9BQ96SB3 815 aa16.91■□□□□ 0.3
SNX12-202ENST00000374274 KDM5AP29375 1690 aaKnown RBP16.9■□□□□ 0.3
SNX12-202ENST00000374274 CLTCL1P53675 1640 aa16.89■□□□□ 0.3
SNX12-202ENST00000374274 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.3
SNX12-202ENST00000374274 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
SNX12-202ENST00000374274 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.29
SNX12-202ENST00000374274 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
SNX12-202ENST00000374274 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
SNX12-202ENST00000374274 OFD1O75665 1012 aa16.88■□□□□ 0.29
SNX12-202ENST00000374274 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
SNX12-202ENST00000374274 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
SNX12-202ENST00000374274 WWC1Q8IX03 1113 aa16.88■□□□□ 0.29
SNX12-202ENST00000374274 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
SNX12-202ENST00000374274 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
SNX12-202ENST00000374274 HS1BP3Q53T59 392 aa16.86■□□□□ 0.29
SNX12-202ENST00000374274 MAP3K4Q9Y6R4 1608 aa16.86■□□□□ 0.29
SNX12-202ENST00000374274 RBM25P49756 843 aaKnown RBP16.86■□□□□ 0.29
SNX12-202ENST00000374274 KIAA1211Q6ZU35 1233 aa16.86■□□□□ 0.29
SNX12-202ENST00000374274 IQSEC2Q5JU85 1478 aa16.85■□□□□ 0.29
SNX12-202ENST00000374274 LMTK2Q8IWU2 1503 aa16.85■□□□□ 0.29
SNX12-202ENST00000374274 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
SNX12-202ENST00000374274 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
SNX12-202ENST00000374274 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
SNX12-202ENST00000374274 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
SNX12-202ENST00000374274 WDR63Q8IWG1 891 aa16.84■□□□□ 0.29
SNX12-202ENST00000374274 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
SNX12-202ENST00000374274 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
SNX12-202ENST00000374274 ABCA6Q8N139 1617 aa16.84■□□□□ 0.29
SNX12-202ENST00000374274 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
SNX12-202ENST00000374274 NEURL4Q96JN8 1562 aa16.84■□□□□ 0.29
SNX12-202ENST00000374274 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
SNX12-202ENST00000374274 ANP32BQ92688 251 aaKnown RBP16.83■□□□□ 0.28
SNX12-202ENST00000374274 GLI2P10070 1586 aa16.83■□□□□ 0.28
SNX12-202ENST00000374274 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
SNX12-202ENST00000374274 SPRYD3Q8NCJ5 442 aa16.82■□□□□ 0.28
SNX12-202ENST00000374274 TNPO1Q92973 898 aaKnown RBP16.82■□□□□ 0.28
SNX12-202ENST00000374274 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
SNX12-202ENST00000374274 GAS2L3Q86XJ1 694 aa16.82■□□□□ 0.28
SNX12-202ENST00000374274 SHPRHQ149N8 1683 aa16.82■□□□□ 0.28
SNX12-202ENST00000374274 MVPQ14764 893 aaKnown RBP16.81■□□□□ 0.28
SNX12-202ENST00000374274 CCDC27Q2M243 656 aa16.81■□□□□ 0.28
SNX12-202ENST00000374274 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
SNX12-202ENST00000374274 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
SNX12-202ENST00000374274 RICTORQ6R327 1708 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms